BALL::GeometricFit Member List

This is the complete list of members for BALL::GeometricFit, including all inherited members.
abort()BALL::DockingAlgorithm [virtual]
abort_BALL::DockingAlgorithm [protected]
calcConjugate_(ProteinIndex pro_idx)BALL::GeometricFit [protected]
changeProteinOrientation_(System &system, Vector3 euler_ang)BALL::GeometricFit [protected]
CONNOLLY enum valueBALL::GeometricFit
current_round_BALL::GeometricFit [protected]
destroy_()BALL::GeometricFit [protected]
doPreTranslation_(ProteinIndex pro_idx)BALL::GeometricFit [protected]
FFT_grid_a_BALL::GeometricFit [protected]
FFT_grid_b_BALL::GeometricFit [protected]
FFT_grid_lower_coord_BALL::GeometricFit [protected]
FFT_grid_lower_index_BALL::GeometricFit [protected]
FFT_grid_origin_BALL::GeometricFit [protected]
FFT_grid_size_index_BALL::GeometricFit [protected]
FFT_grid_upper_coord_BALL::GeometricFit [protected]
FFT_grid_upper_index_BALL::GeometricFit [protected]
FFTGridMulti_()BALL::GeometricFit [protected]
findConnollySurfacePoints_(System &system, ProteinIndex pro_idx)BALL::GeometricFit [protected]
findFTDockInsidePoints_(System &system, ProteinIndex pro_idx)BALL::GeometricFit [protected]
findFTDockSurfacePoints_(System &system, ProteinIndex pro_idx)BALL::GeometricFit [protected]
findInsidePoints_(System &system, ProteinIndex pro_idx)BALL::GeometricFit [protected]
findVanDerWaalsSurfacePoints_(System &system, ProteinIndex pro_idx)BALL::GeometricFit [protected]
FTDOCK enum valueBALL::GeometricFit
GeometricFit()BALL::GeometricFit
GeometricFit(System &system1, System &system2)BALL::GeometricFit
GeometricFit(Options &new_options)BALL::GeometricFit
GeometricFit(System &system1, System &system2, Options &new_options)BALL::GeometricFit
getConformationSet(Index total_number=0)BALL::GeometricFit [virtual]
getGlobalPeak_(Peak_ *peak_list)BALL::GeometricFit [protected]
getMassCenter_(System &system)BALL::GeometricFit [protected]
getOrientation(Index con_num) const BALL::GeometricFit
getProgress() const BALL::GeometricFit [virtual]
getRadius_(System &system)BALL::GeometricFit [protected]
getSeparation_(const Vector3 &mat_pos)BALL::GeometricFit [protected]
getTranslation(Index con_num) const BALL::GeometricFit
getTranslation_(const Vector3 &mat_pos)BALL::GeometricFit [protected]
hasFinished() const BALL::GeometricFit [virtual]
initFFTGrid_(ProteinIndex pro_idx)BALL::GeometricFit [protected]
initGridSizes_()BALL::GeometricFit [protected]
makeFFTGrid_(ProteinIndex pro_idx)BALL::GeometricFit [protected]
optimizeGridSize_(int raw_size)BALL::GeometricFit [protected]
optionsBALL::GeometricFit
orientations_BALL::GeometricFit [protected]
pause()BALL::DockingAlgorithm [virtual]
pause_BALL::DockingAlgorithm [protected]
peak_set_BALL::GeometricFit [protected]
pre_translation_a_BALL::GeometricFit [protected]
pre_translation_b_BALL::GeometricFit [protected]
proceed()BALL::DockingAlgorithm [virtual]
PROTEIN_A enum valueBALL::GeometricFit
PROTEIN_B enum valueBALL::GeometricFit
ProteinIndex enum nameBALL::GeometricFit
radius_a_BALL::GeometricFit [protected]
radius_b_BALL::GeometricFit [protected]
setup(System &system1, System &system2, Options &new_options)BALL::GeometricFit [virtual]
setup(System &system1, System &system2)BALL::GeometricFit [virtual]
start()BALL::GeometricFit [virtual]
SurfaceType enum nameBALL::GeometricFit
system1_BALL::DockingAlgorithm [protected]
system2_BALL::DockingAlgorithm [protected]
system_backup_a_BALL::GeometricFit [protected]
system_backup_b_BALL::GeometricFit [protected]
total_round_BALL::GeometricFit [protected]
translations_BALL::GeometricFit [protected]
VAN_DER_WAALS enum valueBALL::GeometricFit
wasAborted() const BALL::DockingAlgorithm [inline, virtual]
wasPaused() const BALL::DockingAlgorithm [inline, virtual]
~DockingAlgorithm()BALL::DockingAlgorithm [inline, virtual]
~GeometricFit()BALL::GeometricFit