- Member BALL::TQuaternion::set (const TVector3< T > &axis, const T &angle)
- use TQuaternion::fromAxisAngle() instead
- Member BALL::TriangulatedSurface::numberOfPoints () const
- Use TriangulatedSurface::getNumberOfPoints() instead
- Member BALL::TriangulatedSurface::getNumberOfPoints () const
- Use TriangulatedSurface::getNumberOfPoints() instead
- Member BALL::TriangulatedSurface::numberOfEdges () const
- Use TriangulatedSurface::getNumberOfEdges() instead
- Member BALL::TriangulatedSurface::numberOfTriangles () const
- Use TriangulatedSurface::getNumberOfTriangles() instead
- Member BALL::XYZFile::getComent () const
- Instead of this method use XYZFile::getComment()
- Member BALL::calculateSASArea (const AtomContainer &fragment, float probe_radius=1.5, Size number_of_dots=400)
- Use NumericalSAS::getTotalArea() instead
- Member BALL::calculateSASVolume (const AtomContainer &fragment, float probe_radius=1.5, Size number_of_dots=400)
- Use NumericalSAS::getTotalVolume() instead
- Member BALL::calculateSASAtomAreas (const AtomContainer &fragment, HashMap< const Atom *, float > &atom_areas, float probe_radius=1.5, Size number_of_dots=400)
- Use NumericalSAS::getAtomAreas() instead
- Member BALL::calculateSASPoints (const AtomContainer &fragment, Surface &surface_points, float probe_radius=1.5, Size number_of_dots=400)
- Use NumericalSAS::getSurface() instead
- Member BALL::calculateSASAtomPoints (const AtomContainer &fragment, std::vector< std::pair< Vector3, Surface > > &atom_surfaces, float probe_radius=1.5, Size number_of_dots=400)
- Use NumericalSAS::getSurfaceMap() instead