surfaceDescriptors.h

Go to the documentation of this file.
00001 // -*- Mode: C++; tab-width: 2; -*-
00002 // vi: set ts=2:
00003 //
00004 //
00005 
00006 #ifndef BALL_QSAR_SURFACEDESCRIPTORS_H
00007 #define BALL_QSAR_SURFACEDESCRIPTORS_H
00008 
00009 #ifndef BALL_QSAR_SURFACEBASE_H
00010 # include <BALL/QSAR/surfaceBase.h>
00011 #endif
00012 
00013 namespace BALL
00014 {
00015   // 15 surface descriptors 
00016 
00021   class BALL_EXPORT PositiveVdWSurface
00022     : public SurfaceBase
00023   {
00024     public:
00025 
00026     BALL_CREATE(PositiveVdWSurface);
00027     
00033     PositiveVdWSurface();
00034 
00037     PositiveVdWSurface(const PositiveVdWSurface& ps);
00038     
00041     virtual ~PositiveVdWSurface();
00043 
00049     PositiveVdWSurface& operator = (const PositiveVdWSurface& ps);
00051   };
00052 
00057   class BALL_EXPORT NegativeVdWSurface
00058     : public SurfaceBase
00059   {
00060     public:
00061 
00062     BALL_CREATE(NegativeVdWSurface)
00063 
00064     
00069     NegativeVdWSurface();
00070 
00073     NegativeVdWSurface(const NegativeVdWSurface& ns);
00074 
00077     virtual ~NegativeVdWSurface();
00079 
00085     NegativeVdWSurface& operator = (const NegativeVdWSurface& ns);
00087   };
00088 
00094   class BALL_EXPORT PositivePolarVdWSurface
00095     : public SurfaceBase
00096   {
00097     public:
00098 
00099     BALL_CREATE(PositivePolarVdWSurface)
00100 
00101     
00106     PositivePolarVdWSurface();
00107 
00110     PositivePolarVdWSurface(const PositivePolarVdWSurface& pps);
00111 
00114     virtual ~PositivePolarVdWSurface();
00116 
00122     PositivePolarVdWSurface& operator = (const PositivePolarVdWSurface& pps);
00124   };
00125 
00131   class BALL_EXPORT NegativePolarVdWSurface
00132     : public SurfaceBase
00133   {
00134     public:
00135 
00136     BALL_CREATE(NegativePolarVdWSurface)
00137 
00138     
00143     NegativePolarVdWSurface();
00144 
00147     NegativePolarVdWSurface(const NegativePolarVdWSurface& nps);
00148     
00151     virtual ~NegativePolarVdWSurface();
00153 
00159     NegativePolarVdWSurface& operator = (const NegativePolarVdWSurface& nps);
00161   };
00162 
00167   class BALL_EXPORT HydrophobicVdWSurface
00168     : public SurfaceBase
00169   {
00170     public:
00171 
00172     BALL_CREATE(HydrophobicVdWSurface)
00173 
00174     
00179     HydrophobicVdWSurface();
00180 
00183     HydrophobicVdWSurface(const HydrophobicVdWSurface& hs);
00184 
00187     virtual ~HydrophobicVdWSurface();
00189 
00195     HydrophobicVdWSurface& operator = (const HydrophobicVdWSurface& hs);
00197   };
00198 
00203   class BALL_EXPORT PolarVdWSurface
00204     : public SurfaceBase
00205   {
00206     public:
00207 
00208     BALL_CREATE(PolarVdWSurface)
00209 
00210     
00215     PolarVdWSurface();
00216 
00219     PolarVdWSurface(const PolarVdWSurface& ps);
00220     
00223     virtual ~PolarVdWSurface();
00225 
00231     PolarVdWSurface& operator = (const PolarVdWSurface& ps);
00233   };
00234 
00241   class BALL_EXPORT RelPositiveVdWSurface
00242     : public SurfaceBase
00243   {
00244     public:
00245 
00246     BALL_CREATE(RelPositiveVdWSurface)
00247 
00248     
00253     RelPositiveVdWSurface();
00254     
00257     RelPositiveVdWSurface(const RelPositiveVdWSurface& rps);
00258     
00261     virtual ~RelPositiveVdWSurface();
00263 
00269     RelPositiveVdWSurface& operator = (const RelPositiveVdWSurface& rps);
00271     
00275     double compute(AtomContainer& ac);
00277   };
00278 
00285   class BALL_EXPORT RelNegativeVdWSurface
00286     : public SurfaceBase
00287   {
00288     public:
00289 
00290     BALL_CREATE(RelNegativeVdWSurface)
00291 
00292     
00297     RelNegativeVdWSurface();
00298 
00301     RelNegativeVdWSurface(const RelNegativeVdWSurface& rns);
00302     
00305     virtual ~RelNegativeVdWSurface();
00306     //q}
00307 
00313     RelNegativeVdWSurface& operator = (const RelNegativeVdWSurface& rns);
00315 
00319     double compute(AtomContainer& ac);
00321   };
00322 
00330   class BALL_EXPORT RelPositivePolarVdWSurface
00331     : public SurfaceBase
00332   {
00333     public:
00334 
00335     BALL_CREATE(RelPositivePolarVdWSurface)
00336 
00337     
00342     RelPositivePolarVdWSurface();
00343 
00346     RelPositivePolarVdWSurface(const RelPositivePolarVdWSurface& rpps);
00347 
00350     virtual ~RelPositivePolarVdWSurface();
00352 
00358     RelPositivePolarVdWSurface& operator = (const RelPositivePolarVdWSurface& rpps);
00360 
00364     double compute(AtomContainer& ac);
00366   };
00367 
00375   class BALL_EXPORT RelNegativePolarVdWSurface
00376     : public SurfaceBase
00377   {
00378     public:
00379 
00380     BALL_CREATE(RelNegativePolarVdWSurface)
00381 
00382     
00387     RelNegativePolarVdWSurface();
00388 
00391     RelNegativePolarVdWSurface(const RelNegativePolarVdWSurface& rnps);
00392 
00395     virtual ~RelNegativePolarVdWSurface();
00397     
00403     RelNegativePolarVdWSurface& operator = (const RelNegativePolarVdWSurface& rnps);
00405 
00409     double compute(AtomContainer& ac);
00411   };
00412 
00419   class BALL_EXPORT RelHydrophobicVdWSurface
00420     : public SurfaceBase
00421   {
00422     public:
00423 
00424     BALL_CREATE(RelHydrophobicVdWSurface)
00425 
00426     
00431     RelHydrophobicVdWSurface();
00432 
00435     RelHydrophobicVdWSurface(const RelHydrophobicVdWSurface& rhs);
00436 
00439     virtual ~RelHydrophobicVdWSurface();
00441 
00447     RelHydrophobicVdWSurface& operator = (const RelHydrophobicVdWSurface& rhs);
00449     
00453     double compute(AtomContainer& ac);
00455   };
00456 
00463   class BALL_EXPORT RelPolarVdWSurface
00464     : public SurfaceBase
00465   {
00466     public:
00467 
00468     BALL_CREATE(RelPolarVdWSurface)
00469 
00470     
00475     RelPolarVdWSurface();
00476 
00479     RelPolarVdWSurface(const RelPolarVdWSurface& rps);
00480 
00483     virtual ~RelPolarVdWSurface();
00485 
00491     RelPolarVdWSurface& operator = (const RelPolarVdWSurface& rps);
00493 
00497     double compute(AtomContainer& ac);
00499   };
00500 
00504   class BALL_EXPORT VdWVolume
00505     : public SurfaceBase
00506   {
00507     public:
00508 
00509     BALL_CREATE(VdWVolume)
00510 
00511     
00516     VdWVolume();
00517 
00520     VdWVolume(const VdWVolume& vol);
00521 
00524     virtual ~VdWVolume();
00526 
00532     VdWVolume& operator = (const VdWVolume& vol);
00534   };
00535 
00540   class BALL_EXPORT Density
00541     : public SurfaceBase
00542   {
00543     public:
00544 
00545     BALL_CREATE(Density)
00546 
00547     
00552     Density();
00553 
00556     Density(const Density& rho);
00557 
00560     virtual ~Density();
00562 
00568     Density& operator = (const Density& rho);
00570   };
00571 
00575   class BALL_EXPORT VdWSurface
00576     : public SurfaceBase
00577   {
00578     public:
00579 
00580     BALL_CREATE(VdWSurface)
00581 
00582     
00587     VdWSurface();
00588 
00591     VdWSurface(const VdWSurface& s);
00592     
00595     virtual ~VdWSurface();
00597 
00603     VdWSurface& operator = (const VdWSurface& s);
00605   };
00606 
00607 } // namespace BALL
00608 
00609 #endif // BALL_QSAR_SURFACEDESCRIPTORS_H
00610