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r0_ BALL::QuadraticBondStretch
r0_normal BALL::MMFF94StretchParameters::BondData
r0_sbmb BALL::MMFF94StretchParameters::BondData
r1_ BALL::ChemScoreMetal
r_direction_ BALL::VIEW::LightSource
R_ij_o_ BALL::PairExpRDFIntegrator
r_max_ BALL::ReducedSurface
r_min BALL::CharmmEEF1::Values
R_min_ BALL::CharmmEEF1
r_position_ BALL::VIEW::LightSource
Ra BALL::Element
radii BALL::MMFF94StretchParameters
radii_ BALL::ElectrostaticPotentialCalculator
RADIUM BALL::Element
radius_a_ BALL::GeometricFit
radius_b_ BALL::GeometricFit
radius_factor_ BALL::VIEW::AddVanDerWaalsModel
radius_of_torus_ BALL::RSEdge
radius_offset_ BALL::SurfaceProcessor
RADON BALL::Element
RANDOM BALL::VIEW::DockingController
randomDouble BALL::RandomNumberGenerator
RandomEvaluation BALL::RandomEvaluation
randomGaussian BALL::RandomNumberGenerator
randomInteger BALL::RandomNumberGenerator
randomUniform BALL::RandomNumberGenerator
Range BALL::TAngle
range_ BALL::PiecewiseFunction
RANGE__SIGNED BALL::TAngle
RANGE__UNLIMITED BALL::TAngle
RANGE__UNSIGNED BALL::TAngle
rank_ BALL::MPISupport
RANK_1 BALL::ShiftedLVMMMinimizer
RANK_2 BALL::ShiftedLVMMMinimizer
RATIO_OF_SHIFT_PARAMS BALL::ShiftedLVMMMinimizer
RaytraceableContourSurfaceDialog BALL::VIEW::RaytraceableContourSurfaceDialog
RaytraceableGrid BALL::VIEW
RaytracingMaterial BALL::VIEW::Stage
Rb BALL::Element
rb_ BALL::VIEW::Scene
rdbuf BALL::LogStream
rdf_indices_ BALL::RDFParameter
rdf_integrator_ BALL::Pair6_12InteractionEnergyProcessor
rdf_list_ BALL::RDFParameter
RDFSection BALL
Re BALL::Element
reacting_center_status BALL::MOLFile::BondStruct
reaction_component_number BALL::MOLFile::AtomStruct
reaction_component_type BALL::MOLFile::AtomStruct
reactTo BALL::VIEW::PyWidget
reactToKeyEvent_ BALL::VIEW::EditableScene
reactToMessages_ BALL::VIEW::MolecularControl
read_all_pdb_models_ BALL::VIEW::MolecularFileDialog
read_atoms_ BALL::SDFile
read_sd_descriptors BALL::QSAR::InputConfiguration
read_start_ BALL::GAFFCESParser
readACFile BALL::VIEW::MolecularFileDialog
readAndInitBondAnglesFromFile_ BALL::HybridisationProcessor
readAtomicPolarizabilities_ BALL::SimpleBase
readAtomLine_ BALL::MOLFile
readAtomPenalties_ BALL::AssignBondOrderProcessor
readAtomSection_ BALL::MOL2File
readAtomTypeSmartsFromFile_ BALL::HybridisationProcessor
readBinValueasFloat_ BALL::CCP4File
readBinValueasInt_ BALL::CCP4File
readBondLengthsFromFile_ BALL::BuildBondsProcessor
readBondLine_ BALL::MOLFile
readBondSection_ BALL::MOL2File
readClassInformationFromFile BALL::QSAR::ClassificationModel
readCommentSection_ BALL::MOL2File
readConversionTable_ BALL::Peptides::NameConverter
readCountsLine_ BALL::MOLFile
readCTAB_ BALL::MOLFile
readDCDFile BALL::ConformationSet
readDELIMITER_ BALL::KCFFile
readDescriptorInformation BALL::QSAR::Model
readEDGE_ BALL::KCFFile
readElectronAffinities_ BALL::PartialChargeProcessor
readENTRY_ BALL::KCFFile
readEntryInformation_ BALL::NMRStarFile
readFeatureSelectionConfiguration BALL::QSAR::ConfigIO
readFiles BALL::VIEW::MolecularFileDialog
readFirstRecord BALL::PDBFile
readFloat_ BALL::DCDFile
readFromString BALL::VIEW::Camera
readHeaderValue_ BALL::DSN6File
readHINFile BALL::VIEW::MolecularFileDialog
readInputConfiguration BALL::QSAR::ConfigIO
readInputPartitioningConfiguration BALL::QSAR::ConfigIO
readInvalidRecord BALL::PDBFile
readIonizationEnergies_ BALL::PartialChargeProcessor
readKernelParametersFromFile BALL::QSAR::KernelModel
readLabels BALL::QSAR::ClassificationModel
readLights_ BALL::VIEW::Scene
ReadLocker BALL
readModelConfiguration BALL::QSAR::ConfigIO
readModelParametersFromFile BALL::QSAR::Model
readMOL2File BALL::VIEW::MolecularFileDialog
readMoleculeSection_ BALL::MOL2File
readMOLFile BALL::VIEW::MolecularFileDialog
readMolSystem_ BALL::NMRStarFile
readMonomericPolymers_ BALL::NMRStarFile
readMSMSFile BALL::TSurface
readNextHeader BALL::TRRFile
readNextRecord BALL::PDBFile
readNMRSpectrometer_ BALL::NMRStarFile
readNODE_ BALL::KCFFile
readObject BALL::PersistenceManager
readObjectArray BALL::PersistenceManager
readObjectPointer BALL::PersistenceManager
readObjectPointerArray BALL::PersistenceManager
readObjectReference BALL::PersistenceManager
readObjectSmartPointer BALL::PersistenceManager
readOptionFile BALL::Options
readParameters BALL::MMFF94ParametersBase
readPDBFile BALL::VIEW::MolecularFileDialog
readPredictionConfiguration BALL::QSAR::ConfigIO
readPrimitive BALL::PersistenceManager
readPropertyBlock_ BALL::SDFile
readPseudoAtomsConversionTable_ BALL::Peptides::NameConverter
readRecords BALL::PDBFile
readSampleConditions_ BALL::NMRStarFile
readSamples_ BALL::NMRStarFile
readScalingFactors BALL::GeneralizedBornModel
readSetSection_ BALL::MOL2File
readShiftReferences_ BALL::NMRStarFile
readShifts_ BALL::NMRStarFile
readShortcutsFromFile BALL::VIEW::ShortcutRegistry
readStorableObject BALL::PersistenceManager
readSubstructureSection_ BALL::MOL2File
readSymmetryRecords BALL::CCP4File
readTrainingData BALL::QSAR::Model
readTrainingResult BALL::QSAR::KernelModel
readUnknownRecord BALL::PDBFile
readValidationConfiguration BALL::QSAR::ConfigIO
readVector BALL::QSAR::Model
readVector_ BALL::DCDFile
readXYZFile BALL::VIEW::MolecularFileDialog
REAL__CHI BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
REAL__DISCRETE BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
REAL__REAL BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
real_renderer_ BALL::VIEW::TilingRenderer
rebuild_ BALL::VIEW::Representation
rebuildAllRepresentations BALL::VIEW::RepresentationManager
rec_edges_ BALL::SmartsParser
rec_matches_ BALL::SmartsMatcher
rec_struct_core_ BALL::SmartsMatcher::RecStruct_
rec_struct_pool_ BALL::SmartsMatcher::RecStructPool_
receive_updates_ BALL::VIEW::RenderSetup
received_composite_ BALL::VIEW::ServerWidget::BALLViewServer
receivedData BALL::SimpleDownloaderHelper::DLHelper
receiveOptions BALL::MPISupport
receivePersistenceStream_ BALL::MPISupport
receiver_ BALL::VIEW::InputDeviceDriver
receiverLock BALL::VIEW::InputDeviceDriver
receivesBufferUpdates BALL::VIEW::RenderSetup
receiveSystem BALL::MPISupport
receptor_rings_ BALL::AromaticRingStacking
recieve BALL::RingPerceptionProcessor::TNode_
recieve_buffer BALL::RingPerceptionProcessor::TNode_
Reciprocal BALL
reconstructFragment BALL::ReconstructFragmentProcessor
record_animation_action_ BALL::VIEW::Scene
record_fields_ BALL::PDBFile
record_name
BALL::PDB::RecordANISOU::record_name() BALL::PDB::RecordATOM::record_name() BALL::PDB::RecordAUTHOR::record_name() BALL::PDB::RecordCAVEAT::record_name() BALL::PDB::RecordCISPEP::record_name() BALL::PDB::RecordCOMPND::record_name() BALL::PDB::RecordCONECT::record_name() BALL::PDB::RecordCON06::record_name() BALL::PDB::RecordCON061::record_name() BALL::PDB::RecordCON062::record_name() BALL::PDB::RecordCON063::record_name() BALL::PDB::RecordCON064::record_name() BALL::PDB::RecordCRYST1::record_name() BALL::PDB::RecordDBREF::record_name() BALL::PDB::RecordEND::record_name() BALL::PDB::RecordENDMDL::record_name() BALL::PDB::RecordEXPDTA::record_name() BALL::PDB::RecordFORMUL::record_name() BALL::PDB::RecordFTNOTE::record_name() BALL::PDB::RecordHEADER::record_name() BALL::PDB::RecordHELIX::record_name() BALL::PDB::RecordHET::record_name() BALL::PDB::RecordHETATM::record_name() BALL::PDB::RecordHETNAM::record_name() BALL::PDB::RecordHETSYN::record_name() BALL::PDB::RecordHYDBND::record_name() BALL::PDB::RecordJRNL::record_name() BALL::PDB::RecordKEYWDS::record_name() BALL::PDB::RecordLINK::record_name() BALL::PDB::RecordMASTER::record_name() BALL::PDB::RecordMODEL::record_name() BALL::PDB::RecordMODRES::record_name() BALL::PDB::RecordMTRIX1::record_name() BALL::PDB::RecordMTRIX2::record_name() BALL::PDB::RecordMTRIX3::record_name() BALL::PDB::RecordOBSLTE::record_name() BALL::PDB::RecordORIGX1::record_name() BALL::PDB::RecordORIGX2::record_name() BALL::PDB::RecordORIGX3::record_name() BALL::PDB::RecordREMARK::record_name() BALL::PDB::RecordREVDAT::record_name() BALL::PDB::RecordSCALE1::record_name() BALL::PDB::RecordSCALE2::record_name() BALL::PDB::RecordSCALE3::record_name() BALL::PDB::RecordSEQADV::record_name() BALL::PDB::RecordSEQRES::record_name() BALL::PDB::RecordSHEET::record_name() BALL::PDB::RecordSIGATM::record_name() BALL::PDB::RecordSIGUIJ::record_name() BALL::PDB::RecordSITE::record_name() BALL::PDB::RecordSLTBRG::record_name() BALL::PDB::RecordSOURCE::record_name() BALL::PDB::RecordSPRSDE::record_name() BALL::PDB::RecordSSBOND::record_name() BALL::PDB::RecordTER::record_name() BALL::PDB::RecordTITLE::record_name() BALL::PDB::RecordTURN::record_name() BALL::PDB::RecordTVECT::record_name()
record_serial_number BALL::PDB::RecordCISPEP
RECORD_TAG_ANISOU BALL::PDB
RECORD_TAG_ATOM BALL::PDB
RECORD_TAG_AUTHOR BALL::PDB
RECORD_TAG_CAVEAT BALL::PDB
RECORD_TAG_CISPEP BALL::PDB
RECORD_TAG_COMPND BALL::PDB
RECORD_TAG_CON06 BALL::PDB
RECORD_TAG_CON061 BALL::PDB
RECORD_TAG_CON062 BALL::PDB
RECORD_TAG_CON063 BALL::PDB
RECORD_TAG_CON064 BALL::PDB
RECORD_TAG_CONECT BALL::PDB
RECORD_TAG_CRYST1 BALL::PDB
RECORD_TAG_DBREF BALL::PDB
RECORD_TAG_END BALL::PDB
RECORD_TAG_ENDMDL BALL::PDB
RECORD_TAG_EXPDTA BALL::PDB
RECORD_TAG_FORMUL BALL::PDB
RECORD_TAG_FTNOTE BALL::PDB
RECORD_TAG_HEADER BALL::PDB
RECORD_TAG_HELIX BALL::PDB
RECORD_TAG_HET BALL::PDB
RECORD_TAG_HETATM BALL::PDB
RECORD_TAG_HETNAM BALL::PDB
RECORD_TAG_HETSYN BALL::PDB
RECORD_TAG_HYDBND BALL::PDB
RECORD_TAG_JRNL BALL::PDB
RECORD_TAG_KEYWDS BALL::PDB
RECORD_TAG_MASTER BALL::PDB
RECORD_TAG_MODEL BALL::PDB
RECORD_TAG_MODRES BALL::PDB
RECORD_TAG_MTRIX1 BALL::PDB
RECORD_TAG_MTRIX2 BALL::PDB
RECORD_TAG_MTRIX3 BALL::PDB
RECORD_TAG_OBSLTE BALL::PDB
RECORD_TAG_ORIGX1 BALL::PDB
RECORD_TAG_ORIGX2 BALL::PDB
RECORD_TAG_ORIGX3 BALL::PDB
RECORD_TAG_REMARK BALL::PDB
RECORD_TAG_REVDAT BALL::PDB
RECORD_TAG_SCALE1 BALL::PDB
RECORD_TAG_SCALE2 BALL::PDB
RECORD_TAG_SCALE3 BALL::PDB
RECORD_TAG_SEQADV BALL::PDB
RECORD_TAG_SEQRES BALL::PDB
RECORD_TAG_SHEET BALL::PDB
RECORD_TAG_SIGATM BALL::PDB
RECORD_TAG_SIGUIJ BALL::PDB
RECORD_TAG_SITE BALL::PDB
RECORD_TAG_SLTBRG BALL::PDB
RECORD_TAG_SOURCE BALL::PDB
RECORD_TAG_SPRSDE BALL::PDB
RECORD_TAG_SSBOND BALL::PDB
RECORD_TAG_TER BALL::PDB
RECORD_TAG_TITLE BALL::PDB
RECORD_TAG_TURN BALL::PDB
RECORD_TAG_TVECT BALL::PDB
record_type
BALL::PDB::RecordTypeFormat::record_type() BALL::PDB::RecordANISOU::record_type() BALL::PDB::RecordATOM::record_type() BALL::PDB::RecordAUTHOR::record_type() BALL::PDB::RecordCAVEAT::record_type() BALL::PDB::RecordCISPEP::record_type() BALL::PDB::RecordCOMPND::record_type() BALL::PDB::RecordCONECT::record_type() BALL::PDB::RecordCON06::record_type() BALL::PDB::RecordCON061::record_type() BALL::PDB::RecordCON062::record_type() BALL::PDB::RecordCON063::record_type() BALL::PDB::RecordCON064::record_type() BALL::PDB::RecordCRYST1::record_type() BALL::PDB::RecordDBREF::record_type() BALL::PDB::RecordEND::record_type() BALL::PDB::RecordENDMDL::record_type() BALL::PDB::RecordEXPDTA::record_type() BALL::PDB::RecordFORMUL::record_type() BALL::PDB::RecordFTNOTE::record_type() BALL::PDB::RecordHEADER::record_type() BALL::PDB::RecordHELIX::record_type() BALL::PDB::RecordHET::record_type() BALL::PDB::RecordHETATM::record_type() BALL::PDB::RecordHETNAM::record_type() BALL::PDB::RecordHETSYN::record_type() BALL::PDB::RecordHYDBND::record_type() BALL::PDB::RecordJRNL::record_type() BALL::PDB::RecordKEYWDS::record_type() BALL::PDB::RecordLINK::record_type() BALL::PDB::RecordMASTER::record_type() BALL::PDB::RecordMODEL::record_type() BALL::PDB::RecordMODRES::record_type() BALL::PDB::RecordMTRIX1::record_type() BALL::PDB::RecordMTRIX2::record_type() BALL::PDB::RecordMTRIX3::record_type() BALL::PDB::RecordOBSLTE::record_type() BALL::PDB::RecordORIGX1::record_type() BALL::PDB::RecordORIGX2::record_type() BALL::PDB::RecordORIGX3::record_type() BALL::PDB::RecordREMARK::record_type() BALL::PDB::RecordREVDAT::record_type() BALL::PDB::RecordSCALE1::record_type() BALL::PDB::RecordSCALE2::record_type() BALL::PDB::RecordSCALE3::record_type() BALL::PDB::RecordSEQADV::record_type() BALL::PDB::RecordSEQRES::record_type() BALL::PDB::RecordSHEET::record_type() BALL::PDB::RecordSIGATM::record_type() BALL::PDB::RecordSIGUIJ::record_type() BALL::PDB::RecordSITE::record_type() BALL::PDB::RecordSLTBRG::record_type() BALL::PDB::RecordSOURCE::record_type() BALL::PDB::RecordSPRSDE::record_type() BALL::PDB::RecordSSBOND::record_type() BALL::PDB::RecordTER::record_type() BALL::PDB::RecordTITLE::record_type() BALL::PDB::RecordTURN::record_type() BALL::PDB::RecordTVECT::record_type()
RECORD_TYPE__ATOM BALL::PDB
RECORD_TYPE__CON06 BALL::PDB
RECORD_TYPE__DBREF BALL::PDB
RECORD_TYPE__END BALL::PDB
RECORD_TYPE__HELIX BALL::PDB
RECORD_TYPE__HET BALL::PDB
RECORD_TYPE__JRNL BALL::PDB
RECORD_TYPE__MODEL BALL::PDB
RECORD_TYPE__SHEET BALL::PDB
RECORD_TYPE__SITE BALL::PDB
RECORD_TYPE__TER BALL::PDB
RECORD_TYPE__TITLE BALL::PDB
RECORD_TYPE__TURN BALL::PDB
RECORD_TYPE__TVECT BALL::PDB
RECORD_TYPE_FORMAT BALL::PDB
RecordANISOU BALL::PDB
RecordATOM BALL::PDB
RecordAUTHOR BALL::PDB
RecordCAVEAT BALL::PDB
RecordCISPEP BALL::PDB
RecordCOMPND BALL::PDB
RecordCON06 BALL::PDB
RecordCON061 BALL::PDB
RecordCON062 BALL::PDB
RecordCON063 BALL::PDB
RecordCON064 BALL::PDB
RecordCONECT BALL::PDB
RecordCRYST1 BALL::PDB
RecordDBREF BALL::PDB
RecordEND BALL::PDB
RecordENDMDL BALL::PDB
RecordEXPDTA BALL::PDB
RecordFORMUL BALL::PDB
RecordFTNOTE BALL::PDB
RecordHEADER BALL::PDB
RecordHELIX BALL::PDB
RecordHELIX BALL::PDB::RecordHELIX
RecordHET BALL::PDB
RecordHETATM BALL::PDB
RecordHETNAM BALL::PDB
RecordHETSYN BALL::PDB
RecordHYDBND BALL::PDB
recording_ BALL::VIEW::TestFramework
RecordJRNL BALL::PDB
RecordKEYWDS BALL::PDB
RecordMASTER BALL::PDB
RecordMASTER BALL::PDB::RecordMASTER
RecordMODEL BALL::PDB
RecordMODRES BALL::PDB
RecordMTRIX1 BALL::PDB
RecordMTRIX2 BALL::PDB
RecordMTRIX3 BALL::PDB
RecordName BALL::PDB
RecordOBSLTE BALL::PDB
RecordORIGX1 BALL::PDB
RecordORIGX2 BALL::PDB
RecordORIGX3 BALL::PDB
RecordREMARK BALL::PDB
RecordREVDAT BALL::PDB
records_ BALL::PDBRecords
RecordSCALE1 BALL::PDB
RecordSCALE2 BALL::PDB
RecordSCALE3 BALL::PDB
RecordSEQADV BALL::PDB
RecordSEQRES BALL::PDB
RecordSEQRES BALL::PDB::RecordSEQRES
RecordSHEET BALL::PDB
RecordSHEET BALL::PDB::RecordSHEET
RecordSIGATM BALL::PDB
RecordSIGUIJ BALL::PDB
RecordSITE BALL::PDB
RecordSLTBRG BALL::PDB
RecordSOURCE BALL::PDB
RecordSPRSDE BALL::PDB
RecordSSBOND BALL::PDB::RecordSSBOND
RecordSSBOND BALL::PDB
RecordTER BALL::PDB
RecordTITLE BALL::PDB
RecordTURN BALL::PDB::RecordTURN
RecordTURN BALL::PDB
RecordTVECT BALL::PDB
RecordType BALL::PDB
RecordTypeFormat BALL::PDB
RecordUNKNOWN BALL::PDB
RecStruct_ BALL::SmartsMatcher
RecStructCore_ BALL::SmartsMatcher
RecStructPool_ BALL::SmartsMatcher
recurseGeneration_ BALL::VIEW::MolecularControl
recursion_ BALL::ConnectivityBase
red_ BALL::VIEW::ColorRGBA
RED_CHANNEL BALL::VIEW::ChannelFormat
redock_ BALL::VIEW::DockResultDialog
redock_partner1_ BALL::VIEW::DockResultDialog
redock_partner2_ BALL::VIEW::DockResultDialog
REDRAW BALL::VIEW::SceneMessage
redraw_queue_ BALL::SDGenerator
redrawAllRepresentations BALL::VIEW::MainControl
reduceSelection_ BALL::VIEW::MainControl
reestimateBondOrdersRings_ BALL::BuildBondsProcessor
reference_composite_ BALL::FragmentDistanceCollector
reference_method BALL::NMRStarFile::ShiftReferenceElement
reference_temperature_ BALL::MolecularDynamics
reference_type BALL::NMRStarFile::ShiftReferenceElement
refineModelParts_ BALL::VIEW::AddBackboneModel
reflective_color BALL::VIEW::Stage::RaytracingMaterial
reflective_intensity BALL::VIEW::Stage::RaytracingMaterial
reflectivenessFactorChanged BALL::VIEW::MaterialSettings
regex_ BALL::RegularExpression
register_ BALL::VIEW::RegisterHelpSystemMessage
registerAt BALL::LogStreamNotifier
registerChildEntry BALL::VIEW::PluginDialog
registerClass BALL::PersistenceManager
registerConnectionObject BALL::VIEW::ConnectionObject
registerController BALL::VIEW::DatasetControl
registered_at_ BALL::LogStreamNotifier
registered_models BALL::QSAR::Registry
registered_modules_ BALL::ShiftModel
registered_objects_ BALL::VIEW::PreferencesEntry
registerHandler BALL::PluginManager
RegisterHelpSystemMessage BALL::VIEW::RegisterHelpSystemMessage
registerInstance_ BALL::Embeddable
registerKernelClasses_ BALL::PersistenceManager
registerModule BALL::ShiftModel
registerObject_ BALL::VIEW::PreferencesEntry
registerObjectCreator BALL::VIEW::ServerWidget
registerPredicate BALL::Expression
registerShortcut BALL::VIEW::ShortcutRegistry
registerStandardModules_ BALL::ShiftModel
registerStandardPredicates_ BALL::Expression
registerThis BALL::Embeddable
registerTypes_ BALL::MPISupport
registerWidget BALL::VIEW::ModularWidget
registerWidgetForHelpSystem_ BALL::VIEW::PreferencesEntry
registerWidgets_ BALL::VIEW::PreferencesEntry
Registry BALL::QSAR
RegistryEntry BALL::QSAR
regr_model_ BALL::QSAR::RegressionValidation
regression BALL::QSAR::RegistryEntry
regression_statistics BALL::QSAR::Registry
RegressionModel BALL::QSAR
RegressionModel BALL::QSAR::RegressionModel
RegularData1DWidget BALL::VIEW
RegularData2DWidget BALL::VIEW
rehash BALL::HashSet
rehash_ BALL::HashSet
RelatedDB BALL::NMRStarFile::MolecularSystem
RelatedDB BALL::NMRStarFile::MolecularSystem::RelatedDB
relation_type BALL::NMRStarFile::MolecularSystem::RelatedDB
relative_ BALL::VIEW::LightSource
remark_number BALL::PDB::RecordREMARK
remark_records BALL::PDB::BookKeeping
remoteness_indicator_ BALL::PDBAtom
RemotenessIndicator BALL::PDBAtom
REMOVE
BALL::VIEW::DatasetMessage::REMOVE() BALL::VIEW::RepresentationMessage::REMOVE() BALL::LogStream::remove() BALL::HashGridBox3::remove() BALL::HashGrid3::remove(Position x, Position y, Position z, const Item &item) BALL::HashGrid3::remove(const Vector3 &vector, const Item &item) BALL::List::remove() BALL::StringHashMap::remove() BALL::AtomContainer::remove(Atom &atom) BALL::AtomContainer::remove(AtomContainer &atom_container) BALL::Chain::remove(SecondaryStructure &secondary_structure) BALL::Chain::remove(Residue &residue) BALL::Chain::remove(Atom &atom) BALL::Chain::remove(AtomContainer &atom_container) BALL::Molecule::remove(Atom &atom) BALL::Molecule::remove(AtomContainer &atom_container) BALL::Molecule::remove(Molecule &molecule) BALL::Nucleotide::remove(Atom &atom) BALL::Nucleotide::remove(AtomContainer &AtomContainer) BALL::Residue::remove(PDBAtom &atom) BALL::Residue::remove(AtomContainer &AtomContainer) BALL::SecondaryStructure::remove(Residue &residue) BALL::SecondaryStructure::remove(Atom &atom) BALL::SecondaryStructure::remove(AtomContainer &atom_container) BALL::System::remove() BALL::GraphEdge::remove() BALL::GraphFace::remove(Vertex *vertex) BALL::GraphFace::remove(Edge *edge) BALL::GraphVertex::remove(Edge *edge) BALL::GraphVertex::remove(Face *face) BALL::RSFace::remove() BALL::Triangle::remove() BALL::TriangulatedSurface::remove(TrianglePoint *point, bool deep=true) BALL::TriangulatedSurface::remove(PointIterator p, bool deep=true) BALL::TriangulatedSurface::remove(TriangleEdge *edge, bool deep=true) BALL::TriangulatedSurface::remove(EdgeIterator e, bool deep=true) BALL::TriangulatedSurface::remove(Triangle *triangle, bool deep=true) BALL::TriangulatedSurface::remove(TriangleIterator t, bool deep=true) BALL::Directory::remove(String old_path) BALL::Directory::remove() BALL::File::remove(String name) BALL::File::remove() BALL::VIEW::CompositeManager::remove() BALL::VIEW::MainControl::remove(Representation &rep) BALL::VIEW::MainControl::remove(Composite &composite, bool to_delete=true, bool update=true) BALL::VIEW::RepresentationManager::remove()
remove_ BALL::VIEW::MainControl
REMOVE_COORDINATE_SYSTEM BALL::VIEW::SceneMessage
remove_correlated BALL::QSAR::FeatureSelectionConfiguration
removeAll BALL::HashGridBox3
removeClippingPlane BALL::VIEW::RepresentationManager
removeComposite BALL::VIEW::MolecularControl
REMOVED_COMPOSITE BALL::VIEW::CompositeMessage
removedComposite BALL::VIEW::RepresentationManager
removeEmptyDescriptors BALL::QSAR::FeatureSelection
removeEntry BALL::VIEW::Preferences
removeGrid_ BALL::VIEW::ModifyRepresentationDialog
removeGridTextures BALL::VIEW::RenderSetup
removeHighlyCorrelatedFeatures BALL::QSAR::FeatureSelection
removeHotkey BALL::VIEW::PyWidget
removeInsideTriangles BALL::SASTriangulator
removeLightPressed BALL::VIEW::LightSettings
removeLightSource BALL::VIEW::Stage
removeLowResponseCorrelation BALL::QSAR::FeatureSelection
removeMenuEntry BALL::VIEW::MainControl
removeModularWidget BALL::VIEW::MainControl
removeRecursive_ BALL::VIEW::MolecularControl
removeSelected BALL::Composite
removeSelection BALL::VIEW::HotkeyTable
removeSolvent BALL::PeriodicBoundary
removeTextureFor_ BALL::VIEW::GLRenderer
removeUnselected BALL::Composite
renameRepresentation BALL::VIEW::GeometricControl
render BALL::VIEW::GLRenderer
render_mode_ BALL::VIEW::GLRenderer
RENDER_MODE_ALWAYS_FRONT BALL::VIEW::GLRenderer
RENDER_MODE_SOLID BALL::VIEW::GLRenderer
RENDER_MODE_TRANSPARENT BALL::VIEW::GLRenderer
RENDER_MODE_UNDEFINED BALL::VIEW::GLRenderer
render_mutex_ BALL::VIEW::RenderSetup
render_timer_ BALL::VIEW::MainControl
renderDashedBond_ BALL::VIEW::AddBallAndStickModel
Renderer BALL::VIEW
rendererChanged BALL::VIEW::MaterialSettings
renderers_ BALL::VIEW::Scene
renderGrid_ BALL::VIEW::EditableScene
rendering_paused_ BALL::VIEW::RenderSetup
RenderMode BALL::VIEW::GLRenderer
renderMultipleBond_ BALL::VIEW::AddBallAndStickModel
renderNucleotideOutline_ BALL::VIEW::AddCartoonModel
renderRepresentation_ BALL::VIEW::GLRenderer
renderRepresentations_ BALL::VIEW::GLRenderer
renderSD_ BALL::VIEW::SDWidget
RenderSetup BALL::VIEW
renderStandardBond_ BALL::VIEW::AddBallAndStickModel
RenderTarget BALL::VIEW
renderToBuffer_ BALL::VIEW::RenderSetup
renderToBufferImpl BALL::VIEW::BufferedRenderer
RenderWindow BALL::VIEW::RenderWindow
RenderWindow BALL::VIEW
rep_label_ BALL::VIEW::MainControl
rep_label_delta_ BALL::VIEW::MainControl
rep_label_nr_ BALL::VIEW::MainControl
rep_to_buffers_ BALL::VIEW::GLRenderer
replace BALL::Composite
replacing_entry_code BALL::PDB::RecordOBSLTE
reply_ BALL::SimpleDownloaderHelper::BasicHelper
Representation BALL::VIEW
representation_to_item_ BALL::VIEW::GeometricControl
RepresentationList BALL::VIEW
RepresentationMessageType BALL::VIEW::RepresentationMessage
RepresentationsConstIterator BALL::VIEW::RepresentationManager
RepresentationSet BALL::VIEW::RepresentationManager
RepresentationsIterator BALL::VIEW::RepresentationManager
reps BALL::VIEW::ExportGeometryDialog
reps_ BALL::VIEW::ClippingPlane
request_ BALL::PubChemDownloader
res BALL::HBondProcessor::ResidueData
resetBondOrders BALL::AssignBondOrderProcessor
resetCamera_ BALL::VIEW::Scene
resetLanguageChanged BALL::VIEW::MainControlPreferences
resetPositions BALL::AtomVector
resetScoring BALL::ConformationSet
resetTo_pressed BALL::VIEW::UndoManagerDialog
resetTracking BALL::VIEW::Scene
Residue BALL::PDB
Residue BALL
residue_data_ BALL::HBondProcessor
residue_id BALL::PDB::AdditionalAtomInfo
residue_in_current_strand BALL::PDB::RecordSHEET
residue_in_previous_strand BALL::PDB::RecordSHEET
residue_insertion_code BALL::PDB::AdditionalAtomInfo
residue_label BALL::NMRStarFile::NMRAtomData
residue_name_ BALL::PDBFile
residue_ptr_to_position_ BALL::HBondProcessor
residue_seq_code BALL::NMRStarFile::NMRAtomData
residue_sequence BALL::NMRStarFile::MonomericPolymer
residue_sequence_number_ BALL::PDBFile
residue_torsions_ BALL::CharmmTorsion
ResidueData BALL::HBondProcessor
ResidueMap BALL::PDBFile
ResidueName BALL::PDB
ResidueNameColorProcessor BALL::VIEW::ResidueNameColorProcessor
ResidueNumberColorProcessor BALL::VIEW::ResidueNumberColorProcessor
ResidueQuadruple BALL::PDBFile
residues_by_index BALL::NMRStarFile::MonomericPolymer
residues_to_be_rendered_ BALL::VIEW::AddBackboneModel
residues_with_rings_ BALL::JohnsonBoveyShiftProcessor
residuesAreConnected_ BALL::VIEW::AddBackboneModel
ResidueTorsions BALL::ResidueTorsions
ResidueTypeColorProcessor BALL::VIEW::ResidueTypeColorProcessor
resize_ BALL::SmartsMatcher::RecStructPool_
resize_to_parent_ BALL::VIEW::SDWidget
resized BALL::VIEW::FrameBufferFormat
resizeNormals BALL::TSurface
resizeTriangles BALL::TSurface
resizeVertices BALL::TSurface
Resolution BALL::VIEW
resolvePseudoAtoms BALL::Peptides::NameConverter
restart_ BALL::TCPServer
restart_frequency_ BALL::ConjugateGradientMinimizer
restoreItem_ BALL::VIEW::AtomOverview
restoreRepresentations BALL::VIEW::RepresentationManager
restoreTrainingResults BALL::QSAR::RegressionValidation
restoreValues_ BALL::VIEW::PreferencesEntry
restoreViewPoint BALL::VIEW::Scene
results BALL::FDPB
results_ BALL::VIEW::PyWidget
retrieveHistoryLine_ BALL::VIEW::PyWidget
retrieveSymOps_ BALL::CrystalInfo
returnPressed BALL::VIEW::PyWidget
reverse BALL::String
reverse_iterator BALL::PDBRecords
revert BALL::GraphEdge
rewind BALL::LineBasedFile
Rf BALL::Element
RGB_24 BALL::VIEW::PixelFormat
RGB_32 BALL::VIEW::PixelFormat
RGB_3_2_2 BALL::VIEW::PixelFormat
RGBA_32 BALL::VIEW::PixelFormat
RGBF_96 BALL::VIEW::PixelFormat
Rh BALL::Element
RHENIUM BALL::Element
rho BALL::QSAR::LibsvmModel::svm_model
rho_ BALL::StrangLBFGSMinimizer
RHODIUM BALL::Element
RIBBON BALL::VIEW::AddBackboneModel
ribbon_height_ BALL::VIEW::AddBackboneModel
ribbon_mode_ BALL::VIEW::AddBackboneModel
ribbon_radius_ BALL::VIEW::AddCartoonModel
ribbonModeEnabled BALL::VIEW::AddBackboneModel
ribbonsEnabled BALL::VIEW::AddCartoonModel
right BALL::String
right_ BALL::VIEW::GLRenderer
RIGHT_EYE BALL::VIEW::RenderSetup
RIGHT_EYE_WINDOW BALL::VIEW::Scene
rij BALL::MMFF94NonBonded::NonBondedPairData
rij_ BALL::MMFF94VDWParameters
rij_7 BALL::MMFF94NonBonded::NonBondedPairData
rij_7_ BALL::MMFF94VDWParameters
Ring BALL::RingAnalyser
Ring BALL::JohnsonBoveyShiftProcessor
ring_analyser_ BALL::SDGenerator
ring_bonds_ BALL::VIEW::AddBallAndStickModel
RING_CONNECTED BALL::SmartsParser::SPAtom
ring_connections_ BALL::SmartsParser
ring_proc_ BALL::SMARTSPredicate
ring_systems_ BALL::RingAnalyser
RingAnalyser BALL::RingAnalyser
RingFinder BALL
ringIsClockwise_ BALL::SDGenerator
rings_per_bond_ BALL::RingAnalyser
RingType BALL::RingAnalyser
rint BALL::Maths
rms BALL::Gradient
rmsd_ BALL::StructureMapper
Rn BALL::Element
root BALL::GAFFCESParser
root_atom BALL::MOL2File::SubstructureStruct
root_predicate BALL::GAFFCESParser
Rotamer BALL
RotamerProbabilityGreaterThan_ BALL::ResidueRotamerSet
rotamers_ BALL::ResidueRotamerSet
rotatable_bonds_ BALL::RotationalEntropyLoss
ROTATE__MODE BALL::VIEW::Scene
ROTATE_ACTION BALL::VIEW::Scene
rotate_action_ BALL::VIEW::Scene
ROTATE_CLOCKWISE_ACTION BALL::VIEW::Scene
rotateBases BALL::DNAMutator
rotateClockwise BALL::VIEW::Scene
rotateComposites BALL::VIEW::Scene
rotateMode_ BALL::VIEW::Scene
rotateSameBases BALL::DNAMutator
rotateSystem_ BALL::VIEW::Scene
rotateSystemClockwise_ BALL::VIEW::Scene
rotateVector3Angle_ BALL::VIEW::GLRenderer
rotateX BALL::TMatrix4x4
rotateY BALL::TMatrix4x4
rotateZ BALL::TMatrix4x4
RotationAngles_ BALL::GeometricFit
round BALL::Maths
row_ BALL::VIEW::AtomOverview::ApplyProcessor
row_averages_ BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
row_axis_ BALL::CCP4File
row_spacing_ BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
rowSelected BALL::VIEW::PythonSettings
RRModel BALL::QSAR::RRModel
RRModel BALL::QSAR
RSComputer BALL
RSEdge BALL
RSFace BALL
rsface_ BALL::SESFace
RSVertex BALL
rsvertex_ BALL::SESFace
rt_contour_surface_dialog_ BALL::VIEW::RaytraceableGridController
rt_material_ BALL::VIEW::Stage
Ru BALL::Element
RUBIDIUM BALL::Element
rule_map_ BALL::RuleEvaluator
rule_times BALL::AtomTyper
rule_types_ BALL::MMFF94ChargeProcessor
RuleList BALL::RuleEvaluator
RuleMap BALL::RuleEvaluator
rules_ BALL::AtomTyper
run_test BALL::VIEW::TestFramework
runBondOrderAssignment BALL::VIEW::MolecularStructure
runCommand_ BALL::VIEW::PyWidget
runCurrentScript BALL::VIEW::PyWidget
runDocking BALL::VIEW::DockingController
runFile BALL::PyInterpreter
RunGAMESSDialog BALL::VIEW
RunGAMESSDialog BALL::VIEW::RunGAMESSDialog
runMinimization BALL::VIEW::MolecularStructure
running_ BALL::VIEW::PyWidget
running_plugins_ BALL::PluginHandler
RunPythonThread BALL::VIEW
RunPythonThread BALL::VIEW::RunPythonThread
runScoring_ BALL::VIEW::DockingController
runString BALL::VIEW::PyWidget
runTest BALL::VIEW::TestFramework
runtime_ BALL::VIEW::TestFramework
RUTHENIUM BALL::Element
RUTHERFORDIUM BALL::Element
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