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abortClicked BALL::VIEW::DockProgressDialog
abortScript BALL::VIEW::PyWidget
abortTest BALL::VIEW::TestFramework
about BALL::Mainframe
aboutToExit BALL::VIEW::MainControl
abs BALL::Maths
ac_split_ BALL::AntechamberFile
activate_async BALL::TCPServerThread
activatedItem_ BALL::VIEW::MolecularControl
activatedOrderItem_ BALL::VIEW::EditableScene
adaptWaterBox BALL::MolmecSupport
addAlgorithm BALL::VIEW::DockDialog
addAllRecords_ BALL::PDBFile
addAtom BALL::VIEW::AtomDistanceColorProcessor
addBasisOption BALL::GAMESSLogFile
addCESelementConnectionPredicate BALL::GAFFCESParser::CESPredicate
addCESelementPredicate BALL::GAFFCESParser::CESPredicate
addCESwildcardsConnectionPredicate BALL::GAFFCESParser::CESPredicate
addCESwildcardsPredicate BALL::GAFFCESParser::CESPredicate
addChild BALL::ConnectedToPredicate::CTPNode
addCoefficient BALL::GAMESSLogFile
addComponent BALL::ComposedEnergyProcessor
addComposite BALL::VIEW::MolecularControl
addComposite_ BALL::VIEW::MolecularStructure
addDataItem BALL::CIFFile::SaveFrame
addDataPath BALL::Path
addEdge BALL::SmartsParser
addEditOperation BALL::VIEW::EditOperationDialog
addEmptyRow BALL::VIEW::HotkeyTable
addEntry BALL::QSAR::Registry
addGlWindow BALL::VIEW::Scene
addHydrogen_ BALL::AddHydrogenProcessor
addHydrogens BALL::VIEW::MolecularStructure
addItem_ BALL::VIEW::GeometricControl
AdditionalAtomInfo BALL::PDB::AdditionalAtomInfo
addLambda BALL::QSAR::Model
addLightPressed BALL::VIEW::LightSettings
addLightSource BALL::VIEW::Stage
addMissingHydrogens BALL::SmilesParser
addModel_ BALL::VIEW::RaytraceableContourSurfaceDialog
addModularWidget BALL::VIEW::MainControl
addMonomericPolymer BALL::NMRStarFile
addMovable_ BALL::ResidueRotamerSet
addNeededObjects_ BALL::PersistenceManager
addNewAND BALL::GAFFCESParser::CESPredicate
addNewFragment_ BALL::FragmentDB
addNewOR BALL::GAFFCESParser::CESPredicate
addNode BALL::SmartsParser
addNonOverlappingMolecules BALL::MolmecSupport
addPair BALL::CIFFile::Item
addPointerPair_ BALL::PersistenceManager
addPropertiesFromSPAtom BALL::SmartsParser::SPAtom
addRecursiveEdge BALL::SmartsParser
addRepresentation BALL::VIEW::GeometricControl
addRingConnection BALL::SmartsParser
addRow BALL::VIEW::GenericControl
addScoring BALL::DockResult
addSolutionToStructures BALL::VIEW::AssignBondOrderResultsDialog
addSolvent BALL::PeriodicBoundary
addSPEdge BALL::SmartsParser::SPNode
addSphere_s_ BALL::BindingPocketProcessor
addStructure BALL::VIEW::EditableScene
addStructure_ BALL::VIEW::EditableScene
addTextNode_ BALL::PubChemDownloader
addTriangles_ BALL::TContourSurface
addTruePredicate BALL::GAFFCESParser::CESPredicate
addValue BALL::CIFFile::Item
addVariants BALL::Enumerator
addWidget_ BALL::VIEW::PropEditorWidget
advancedClicked BALL::VIEW::DockResultDialog
after BALL::String
ala_pressed BALL::VIEW::PeptideDialog
algAdvancedPressed BALL::VIEW::DockDialog
algorithmChosen BALL::VIEW::DockDialog
ALLModel BALL::QSAR::ALLModel
allowPaste_ BALL::VIEW::MolecularControl
alreadySeenThisAtom BALL::GAFFCESParser::CESPredicate
AmberConfigurationDialog BALL::VIEW::AmberConfigurationDialog
ambientFactorChanged BALL::VIEW::MaterialSettings
analyticallyIntegrateInterval BALL::Pair6_12RDFIntegrator
angle_changed BALL::VIEW::PeptideDialog
animate_ BALL::VIEW::Scene
animateClicked BALL::VIEW::SnapshotVisualisationDialog
animationSpeedChanged BALL::VIEW::SnapshotVisualisationDialog
AnimationThread BALL::VIEW::AnimationThread
annotateAliphaticAndAromaticRingAtoms_ BALL::GAFFTypeProcessor
annotateBondTypes_ BALL::GAFFTypeProcessor
annotatePlanarRingAtoms_ BALL::GAFFTypeProcessor
annotateRingSizes_ BALL::GAFFTypeProcessor
appendHotkey BALL::VIEW::HotkeyTable
appendIconPath BALL::VIEW::IconLoader
appendSection BALL::INIFile
appendText BALL::VIEW::PyWidget
appendText_ BALL::VIEW::PyWidget
appendToHistory_ BALL::VIEW::PyWidget
applied BALL::VIEW::Preferences
applyAncestor BALL::Composite
applyBonds BALL::Atom
applyChild BALL::Composite
applyChildNostart_ BALL::Composite
applyColoringSettings_ BALL::VIEW::DisplayProperties
applyDescendant BALL::Composite
applyDescendantPostorder BALL::Composite
applyDescendantPreorder BALL::Composite
applyFirstSnapShot BALL::SnapShotManager
applyForceFieldSettings_ BALL::VIEW::MolecularStructure
applyInterBond BALL::AtomContainer
applyIntraBond BALL::AtomContainer
applyLastSnapShot BALL::SnapShotManager
applyLevel BALL::Composite
applyLevelNostart_ BALL::Composite
applyModelSettings_ BALL::VIEW::DisplayProperties
applyNextSnapShot BALL::SnapShotManager
applyNostart_ BALL::ResourceEntry
applyPostorder BALL::Composite
applyPreferencesClicked_ BALL::VIEW::MainControl
applyPreorder BALL::Composite
applyPreorderNostart_ BALL::Composite
applySettings BALL::VIEW::NetworkPreferences
applySolution_ BALL::Kekuliser
applySplit BALL::VIEW::ModifyRepresentationDialog
applyTo_ BALL::VIEW::DisplayProperties
APSMatcher BALL::GAFFCESParser::APSMatcher
APSTerm BALL::GAFFCESParser::APSMatcher::APSTerm
areInOneAromaticRing BALL::MMFF94
areInOneRing BALL::MMFF94
arg_pressed BALL::VIEW::PeptideDialog
aromatize BALL::AromaticityProcessor
aromatizeSimple BALL::AromaticityProcessor
arrangeBonds_ BALL::Bond
ascii BALL::VIEW
asn_pressed BALL::VIEW::PeptideDialog
asp_pressed BALL::VIEW::PeptideDialog
assembleSD_ BALL::SDGenerator
assign BALL::Templates
assignAromaticType_5_ BALL::MMFF94AtomTyper
assignAtomtype_ BALL::GAFFTypeProcessor
assignBackboneAtoms BALL::AtomBijection
AssignBaseProcessor BALL::AssignBaseProcessor
AssignBondOrderConfigurationDialog BALL::VIEW::AssignBondOrderConfigurationDialog
AssignBondOrderResultsDialog BALL::VIEW::AssignBondOrderResultsDialog
assignBondTypes_ BALL::MMFF94
assignByName BALL::AtomBijection
assignCAlphaAtoms BALL::AtomBijection
assignCharges BALL::Templates
assignFormalCharge BALL::MMFF94ChargeProcessor
assignMMFF94BondType BALL::MMFF94
assignNucleotideAtoms_ BALL::VIEW::AddCartoonModel
assignPartialCharges_ BALL::MMFF94ChargeProcessor
assignRTD_ BALL::RingAnalyser
assignShifts_ BALL::NMRStarFile
assignSpecificValues_ BALL::AtomTyper
assignTorsion BALL::ResidueTorsions
assignTrivial BALL::AtomBijection
AssignTypeNameProcessor BALL::AssignTypeNameProcessor
assignTypeNames BALL::Templates
AssignTypeProcessor BALL::AssignTypeProcessor
AtomEntry BALL::PDB::Structure::AtomEntry
AtomOverview BALL::VIEW::AtomOverview
attachBridged_ BALL::SDGenerator
attachCore_ BALL::SDGenerator
attachFused_ BALL::SDGenerator
attachSpiro_ BALL::SDGenerator
attachTemplate_ BALL::SDGenerator
AutomaticModelCreator BALL::QSAR::AutomaticModelCreator
autoScaleRequested BALL::VIEW::GridColorWidget
AverageBondAngle_ BALL::HybridisationProcessor
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