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DownloadHelper BALL::VIEW::PubChemDialog
p_i_ BALL::ConjugateGradientMinimizer
p_t_ BALL::ConjugateGradientMinimizer
Pa BALL::Element
paintEngine BALL::VIEW::GLOffscreenTarget
paintGL BALL::VIEW::Scene
pair_charges_ BALL::GeneralizedBornModel
pair_distances_ BALL::GeneralizedBornModel
pair_items BALL::CIFFile::SaveFrame
pair_list_ BALL::GeneralizedBornModel
PairListAlgorithmType BALL::MolmecSupport
PALLADIUM BALL::Element
par1 BALL::QSAR::Kernel
par2 BALL::QSAR::Kernel
param BALL::QSAR::LibsvmModel::svm_model
parameterDefaults BALL::QSAR::RegistryEntry
parameterNames BALL::QSAR::RegistryEntry
Parameters BALL
parameters_by_row_ BALL::MMFF94StretchBendParameters
PARENT_DIRECTORY BALL::FileSystem
parent_widget_ BALL::VIEW::ServerWidget::BALLViewServer
parents_ BALL::RingPerceptionProcessor
parity BALL::MOLFile::AtomStruct
pars_ BALL::Bruker1DFile
parse_partial_charges_ BALL::PDBFile
parseAtoms_ BALL::FragmentDB
parseAtomtypeTableFile_ BALL::GAFFTypeProcessor
parseBonds_ BALL::FragmentDB
parseColumnFormat BALL::LineBasedFile
parseDataFile_ BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
parseDelete_ BALL::FragmentDB
ParsedFunction_delBuffer parsedFunction.h
ParsedFunction_initBuffer parsedFunction.h
ParsedFunctionDialog BALL::VIEW::ParsedFunctionDialog
ParsedFunctionparse parsedFunction.h
ParsedFunctionResult parsedFunction.h
ParsedResult_ BALL::VIEW::PubChemDialog
ParseError BALL::Exception
ParseError BALL::Exception::ParseError
parseItemRecursive_ BALL::VIEW::PubChemDialog
parseLine BALL::PDBFile
parseLine_ BALL::VIEW::PyWidget
parseProperties_ BALL::FragmentDB
parser_ BALL::GAFFCESParser::CESPredicate
parseRecordANISOU BALL::PDBFile
parseRecordATOM BALL::PDBFile
parseRecordAUTHOR BALL::PDBFile
parseRecordCAVEAT BALL::PDBFile
parseRecordCISPEP BALL::PDBFile
parseRecordCOMPND BALL::PDBFile
parseRecordCONECT BALL::PDBFile
parseRecordCRYST1 BALL::PDBFile
parseRecordDBREF BALL::PDBFile
parseRecordEND BALL::PDBFile
parseRecordENDMDL BALL::PDBFile
parseRecordEXPDTA BALL::PDBFile
parseRecordFORMUL BALL::PDBFile
parseRecordFTNOTE BALL::PDBFile
parseRecordHEADER BALL::PDBFile
parseRecordHELIX BALL::PDBFile
parseRecordHET BALL::PDBFile
parseRecordHETATM BALL::PDBFile
parseRecordHETNAM BALL::PDBFile
parseRecordHETSYN BALL::PDBFile
parseRecordHYDBND BALL::PDBFile
parseRecordJRNL BALL::PDBFile
parseRecordKEYWDS BALL::PDBFile
parseRecordMASTER BALL::PDBFile
parseRecordMODEL BALL::PDBFile
parseRecordMODRES BALL::PDBFile
parseRecordMTRIX1 BALL::PDBFile
parseRecordMTRIX2 BALL::PDBFile
parseRecordMTRIX3 BALL::PDBFile
parseRecordOBSLTE BALL::PDBFile
parseRecordORIGX1 BALL::PDBFile
parseRecordORIGX2 BALL::PDBFile
parseRecordORIGX3 BALL::PDBFile
parseRecordREMARK BALL::PDBFile
parseRecordREVDAT BALL::PDBFile
parseRecordSCALE1 BALL::PDBFile
parseRecordSCALE2 BALL::PDBFile
parseRecordSCALE3 BALL::PDBFile
parseRecordSEQADV BALL::PDBFile
parseRecordSEQRES BALL::PDBFile
parseRecordSHEET BALL::PDBFile
parseRecordSIGATM BALL::PDBFile
parseRecordSIGUIJ BALL::PDBFile
parseRecordSITE BALL::PDBFile
parseRecordSLTBRG BALL::PDBFile
parseRecordSOURCE BALL::PDBFile
parseRecordSPRSDE BALL::PDBFile
parseRecordSSBOND BALL::PDBFile
parseRecordTER BALL::PDBFile
parseRecordTITLE BALL::PDBFile
parseRecordTURN BALL::PDBFile
parseRecordTVECT BALL::PDBFile
parseRename_ BALL::FragmentDB
parsf1_ BALL::Bruker2DFile
parsf2_ BALL::Bruker2DFile
partial_charge BALL::PDB::RecordATOM
partitionFreeSingularEdge BALL::SESTriangulator
partitionNonFreeSingularEdge BALL::SESTriangulator
partitionOfCircle BALL::SESTriangulator
partitionSingularEdge BALL::SESTriangulator
partitionSingularEdges BALL::SESTriangulator
partner1Chosen BALL::VIEW::DockDialog
partner2Chosen BALL::VIEW::DockDialog
partner_atom BALL::PDB::RecordSLTBRG
partner_id BALL::Kekuliser::AtomInfo
partner_residue BALL::PDB::RecordSSBOND
partner_type_to_htype_ BALL::MMFF94AtomTyper
PartnerAtom BALL::PDB::RecordSLTBRG
past_the_end_ BALL::Enumerator::IteratorTraits_
paste_action_ BALL::VIEW::MolecularControl
paste_id_ BALL::VIEW::MolecularControl
pasteAllowedFor_ BALL::VIEW::MolecularControl
Path BALL
path_array_ BALL::Path
path_array_valid_ BALL::Path
PATH_SEPARATOR BALL::FileSystem
PathMessage_ BALL::RingPerceptionProcessor
PathStrings BALL::PyInterpreter
pattern_ BALL::RegularExpression
pause BALL::DockingAlgorithm
pause_ BALL::DockingAlgorithm
pauseClicked BALL::VIEW::DockProgressDialog
pauseRendering BALL::VIEW::RenderSetup
Pb BALL::Element
pbcis_ BALL::MMFF94ESParameters
pbuf_ BALL::LogStreamBuf
pcd_ BALL::VIEW::PubChemDialog
pcm_ BALL::NonpolarSolvation
pcount BALL::TriangulatedSphere::Face
PCRModel BALL::QSAR::PCRModel
PCRModel BALL::QSAR
Pd BALL::Element
PDB_atom_map_ BALL::PDBFile
PDB_FILE BALL::VIEW::MolecularFileDialog
pdb_id BALL::PDB::AdditionalAtomInfo
PDBAtom BALL
PDBAtomMap BALL::PDBFile
PDBAtoms BALL
pdbDownloadChecked BALL::VIEW::DownloadElectronDensity
PDBFile BALL
PDBInfo BALL
PDBInfoEditorWidget BALL::VIEW
PDBList BALL::PDB
PDBRecords BALL
PDBString BALL::PDB
Peak BALL
Peak1D BALL
Peak2D BALL
Peak3D BALL
Peak_ BALL::GeometricFit::Peak_
Peak_ BALL::GeometricFit
peak_list_ BALL::Experiment
peak_set_ BALL::GeometricFit
PeakList BALL
PeakList1D BALL
PeakList2D BALL
PeakList3D BALL
peaklist_ BALL::CreateSpectrumProcessor
peeling_order_ BALL::RingAnalyser
peelNextRing_ BALL::RingAnalyser
peelRings_ BALL::RingAnalyser
penalties_ BALL::AssignBondOrderProcessor
pentakisDodecaeder BALL::TriangulatedSphere
peptide_ BALL::Peptides::PeptideBuilder
PeptideBuilder BALL::Peptides
PeptideCapProcessor BALL::PeptideCapProcessor
PeptideDialog BALL::VIEW
PeptideDialog BALL::VIEW::PeptideDialog
performAStarStep_ BALL::AssignBondOrderProcessor
performBranchAndBound_ BALL::AssignBondOrderProcessor
performGreedy_ BALL::AssignBondOrderProcessor
performRequiredUpdates_ BALL::ForceField
Period BALL::Element
period_ BALL::Element
periodic_boundary BALL::ForceField
permuteComponentSigns_ BALL::PolarSolvation
PersistentObject BALL::PersistentObject
PERSPECTIVE BALL::VIEW::Camera
phe_pressed BALL::VIEW::PeptideDialog
phi_grid BALL::FDPB
phis_ BALL::MMFF94ESParameters
PHOSPHORUS BALL::Element
pick_select_ BALL::VIEW::Scene
PICKING__MODE BALL::VIEW::Scene
picking_action_ BALL::VIEW::Scene
picking_mode_ BALL::VIEW::GLRenderer
pickingMode_ BALL::VIEW::Scene
pickObjects BALL::VIEW::RenderSetup
pickObjects1 BALL::VIEW::GLRenderer
pickObjects2 BALL::VIEW::GLRenderer
pickParent_ BALL::VIEW::Scene
PIECEWISE_POLYNOMIAL BALL::RDFSection
pilp BALL::MMFF94AtomType
pitch BALL::VIEW::FrameBufferFormat
pixel_buffer_ BALL::VIEW::GLOffscreenTarget
PixelFormat BALL::VIEW
pixmap_ BALL::VIEW::CanvasWidget::PixmapItem
PixmapItem BALL::VIEW::CanvasWidget
placeSubstituent_ BALL::SDGenerator
PLANAR_FRAMEBUFFER BALL::VIEW::PixelFormat
planarAtom_ BALL::GAFFTypeProcessor
PLANE BALL::VIEW::GridVisualisation
Plane3 BALL
plane_ BALL::VIEW::SetClippingPlane
plane_to_item_ BALL::VIEW::GeometricControl
PlaneMap BALL::MMFF94PlaneParameters
PLATINUM BALL::Element
PLSModel BALL::QSAR
PLSModel BALL::QSAR::PLSModel
pluginChanged BALL::VIEW::PluginDialog
PluginDialog BALL::VIEW
PluginDialog BALL::VIEW::PluginDialog
PluginModel BALL::VIEW
PluginModel BALL::VIEW::PluginModel
pluginsLoaded BALL::VIEW::PluginModel
PLUMBUM BALL::Element
plus_ BALL::DSN6File
PLUTONIUM BALL::Element
Pm BALL::Element
Po BALL::Element
Point BALL::VIEW
point_ptr_ BALL::VIEW::Sphere
pointer_list_ BALL::PersistenceManager
pointer_map_ BALL::PersistenceManager
PointerList BALL::PersistenceManager
PointerMap BALL::PersistenceManager
PointIterator BALL::TriangulatedSurface
points BALL::VIEW::GridVisualisation
points_ BALL::TriangulatedSurface
PointVector BALL::RMSDMinimizer
POLAK_RIBIERE BALL::ConjugateGradientMinimizer
polar_color_ BALL::VIEW::ResidueTypeColorProcessor
pollPubChem_ BALL::PubChemDownloader
POLONIUM BALL::Element
polymer_class BALL::NMRStarFile::MonomericPolymer
pool_ BALL::SmartsMatcher
pop BALL::ResourceEntry::IteratorTraits_
pop_back BALL::PDBRecords
popRepresentationToUpdate BALL::VIEW::RepresentationManager
PopUpID BALL::VIEW::MainControl
pos_ BALL::SmartsMatcher::RecStruct_
pos_C BALL::HBondProcessor::ResidueData
pos_H BALL::HBondProcessor::ResidueData
pos_N BALL::HBondProcessor::ResidueData
pos_O BALL::HBondProcessor::ResidueData
posbridges_ BALL::SecondaryStructureProcessor
position_data_size BALL::TRRFile::TRRHeader
POSITION_VALUE_NA BALL::NMRStarFile
POSITIONAL BALL::VIEW::LightSource
PositionColorProcessor BALL::VIEW::PositionColorProcessor
PositionType BALL::Spectrum
positionTypeChanged BALL::VIEW::LightSettings
possible_hydrogen_bonds_ BALL::HydrogenBond
possible_metal_interactions_ BALL::ChemScoreMetal
Postcondition BALL::Exception
Postcondition BALL::Exception::Postcondition
postProcessAtomTypes_ BALL::GAFFTypeProcessor
postprocessHelices_ BALL::PDBFile
postprocessRandomCoils_ BALL::PDBFile
postprocessSheetsTurns_ BALL::PDBFile
postprocessSSBonds_ BALL::PDBFile
POTASSIUM BALL::Element
potential_energy_ BALL::SnapShot
potential_grid_ BALL::VIEW::FieldLineCreator
pov_nr_ BALL::VIEW::Scene
POVColorRGBA BALL::VIEW::POVRenderer
POVFinish BALL::VIEW::POVRenderer
POVRenderer BALL::VIEW
POVRendererClippingPlane BALL::VIEW::POVRenderer
POVVector3 BALL::VIEW::POVRenderer
PQ_Entry_ BALL::AssignBondOrderProcessor
Pr BALL::Element
PRASEODYMIUM BALL::Element
pre_translation_a_ BALL::GeometricFit
pre_translation_b_ BALL::GeometricFit
preassignPenaltyClasses_ BALL::AssignBondOrderProcessor
PRECISION classTest.h
precision_ BALL::TRRFile
precisionBoxChanged BALL::VIEW::DisplayProperties
precisionSliderChanged BALL::VIEW::DisplayProperties
precomputeAtomProperties_ BALL::GAFFTypeProcessor
precomputeBondLengthPenalties_ BALL::AssignBondOrderProcessor
precomputeBondProperties_ BALL::GAFFTypeProcessor
preComputeBonds_ BALL::HBondProcessor
Precondition BALL::Exception
Precondition BALL::Exception::Precondition
predecessor BALL::RingAnalyser::Ring
predicate BALL::ExpressionParser::SyntaxTree
PredictionConfiguration BALL::QSAR::PredictionConfiguration
PredictionMethod BALL::HBondProcessor
predQualFetcher_ BALL::QSAR::RegressionValidation
Preferences BALL::VIEW
preferences_action_ BALL::VIEW::MainControl
preferences_dialog_ BALL::VIEW::MainControl
preferences_file_ BALL::VIEW::MainControl
PreferencesEntry BALL::VIEW::PreferencesEntry
PreferencesEntry BALL::VIEW
PreferencesObject BALL::PreferencesObject
prefix BALL::LogStreamBuf::StreamStruct
prepare_ BALL::SDGenerator
prepareBufferedRendering BALL::VIEW::BufferedRenderer
prepareUpscaling BALL::VIEW::GLOffscreenTarget
prependChild BALL::Composite
pres_size BALL::TRRFile::TRRHeader
prev_shift_val_ BALL::ShiftedLVMMMinimizer
preview_ BALL::VIEW::Scene
previous_ BALL::Composite
primitive_manager_ BALL::VIEW::MainControl
print BALL::VIEW::PixelFormat
print_expected BALL::QSAR::PredictionConfiguration
printAPS BALL::GAFFCESParser::APSMatcher
printCursorPosition_ BALL::VIEW::PyWidget
printEnergy BALL::EnergyMinimizer
printScene BALL::VIEW::Scene
printSelectionInfos BALL::VIEW::MainControl
printUCK BALL::UCK
pro_pressed BALL::VIEW::PeptideDialog
probA BALL::QSAR::LibsvmModel::svm_model
probabilities_ BALL::QSAR::NBModel
probB BALL::QSAR::LibsvmModel::svm_model
probe_intersections_ BALL::SESSingularityCleaner
probe_positions_ BALL::RSComputer
probe_weight BALL::BindingPocketProcessor::Sphere_
probeIntersection BALL::SESSingularityCleaner
ProbeIntersection BALL::SESSingularityCleaner
ProbePosition BALL::RSComputer
probeRadiusChanged BALL::VIEW::ModelSettingsDialog
ProbeStatus BALL::RSComputer
proceed BALL::DockingAlgorithm
processDropEvent BALL::VIEW
processEvent_ BALL::VIEW::TestFramework
processEvents BALL::VIEW::MainControl
processing_message_queue_ BALL::VIEW::ConnectionObject
processMoveModeMouseEvents_ BALL::VIEW::Scene
Processor BALL
processRotateModeMouseEvents_ BALL::VIEW::Scene
prod_ BALL::DSN6File
Product BALL
progress_ BALL::VIEW::PubChemDialog
progress_dialog_ BALL::VIEW::DockingController
project_target_to_ring_plane_ BALL::HaighMallionShiftProcessor
projection_mode_ BALL::VIEW::Camera
ProjectionMode BALL::VIEW::Camera
projectionTransformationChanged BALL::VIEW::StageSettings
prolineActivated BALL::VIEW::PeptideDialog
prolineDeactivated BALL::VIEW::PeptideDialog
PROMETHIUM BALL::Element
prop_ BALL::DNAMutator
PropDeleteWidget BALL::VIEW
PropDeleteWidget BALL::VIEW::PropDeleteWidget
PropEditorWidget BALL::VIEW
PropEditorWidget BALL::VIEW::PropEditorWidget
Properties BALL::VIEW::Representation
properties_real_ BALL::EmpiricalHSShiftProcessor::PropertiesForShift_
properties_string_ BALL::EmpiricalHSShiftProcessor::PropertiesForShift_
PropertiesForShift_ BALL::EmpiricalHSShiftProcessor::PropertiesForShift_
PropertiesForShift_ BALL::EmpiricalHSShiftProcessor
Property BALL::SmartsParser::SPAtom
Property BALL::MOLFile
PROPERTY__3_PRIME BALL::Nucleotide
PROPERTY__5_PRIME BALL::Nucleotide
PROPERTY__ALWAYS_FRONT BALL::VIEW::Representation
PROPERTY__AMINO_ACID BALL::Residue
PROPERTY__ANISOTROPY_SHIFT BALL::AnisotropyShiftProcessor
PROPERTY__C_TERMINAL BALL::Residue
PROPERTY__CYCLIC BALL::Residue
PROPERTY__EF_SHIFT BALL::EFShiftProcessor
PROPERTY__EHS_SHIFT BALL::EmpiricalHSShiftProcessor
PROPERTY__EXPERIMENTAL__SHIFT BALL::ShiftModule
PROPERTY__HAS_SSBOND BALL::Residue
PROPERTY__HBOND_SHIFT BALL::HBondShiftProcessor
PROPERTY__HETATM BALL::PDBAtom
PROPERTY__IS_COORDINATE_SYSTEM BALL::VIEW::Representation
PROPERTY__N_TERMINAL BALL::Residue
PROPERTY__NON_STANDARD BALL::Residue
PROPERTY__NUCLEOTIDE BALL::Nucleotide
PROPERTY__RANDOM_COIL_SHIFT BALL::RandomCoilShiftProcessor
PROPERTY__SHIFT BALL::ShiftModule
PROPERTY__WATER BALL::Residue
property_files_ BALL::EmpiricalHSShiftProcessor
property_pairs_ BALL::EmpiricalHSShiftProcessor
PropertyEditor BALL::VIEW
PropertyError BALL::QSAR::Exception::PropertyError
PropertyError BALL::QSAR::Exception
PropertyType BALL::SmartsParser::SPAtom
PropertyValue BALL::SmartsParser::SPAtom
PROTACTINIUM BALL::Element
Protein BALL
protein_ BALL::VIEW::PeptideDialog
PROTEIN_A BALL::GeometricFit
PROTEIN_B BALL::GeometricFit
protein_clash_rad_ BALL::BindingPocketProcessor
protein_grid_ BALL::BindingPocketProcessor
ProteinIndex BALL::GeometricFit
proteinname_ BALL::Peptides::PeptideBuilder
proteins BALL
protomode BALL::VIEW::ExportGeometryDialog
proxy_model_ BALL::VIEW::ShortcutTableView
proxyEnabled BALL::VIEW::NetworkPreferences
proxyModeChanged BALL::VIEW::NetworkPreferences
pseudo_conventions_ BALL::Peptides::NameConverter
pseudo_conversion_table_ BALL::Peptides::NameConverter
Pt BALL::Element
PTE BALL
PTE_ BALL
PTEDialog BALL::VIEW
PTEDialog BALL::VIEW::PTEDialog
ptr_ BALL::TContourSurface::Cube
Pu BALL::Element
PubChemDialog BALL::VIEW
PubChemDialog BALL::VIEW::PubChemDialog
PubChemDownloader BALL::PubChemDownloader
pug_base_url_ BALL::PubChemDownloader
PURE_DOUBLE_BOND BALL::GAFFCESParser::APSMatcher
PURE_DOUBLE_BOND_TO_PARENT BALL::GAFFCESParser::APSMatcher
PURE_SINGLE_BOND BALL::GAFFCESParser::APSMatcher
PURE_SINGLE_BOND_TO_PARENT BALL::GAFFCESParser::APSMatcher
push_back BALL::PDBRecords
pushbackNCS BALL::CrystalInfo
pushBackNormal BALL::TSurface
pushBackTriangle BALL::TSurface
pushBackVertex BALL::TSurface
pushCFS_ BALL::SDGenerator
pushConcaveEdge BALL::SESComputer
pushVertex BALL::SESComputer
putbackLine BALL::QSAR::ConfigIO
pw_grid_ BALL::BindingPocketProcessor
PyInterpreter BALL::PyInterpreter
python_format BALL::VIEW::PythonHighlighter
python_keywords BALL::VIEW::PythonHighlighter
python_line_ BALL::VIEW::TestFramework
python_patterns BALL::VIEW::PythonHighlighter
python_settings_ BALL::VIEW::PyWidget
PythonHighlighter BALL::VIEW::PythonHighlighter
PythonHighlighter BALL::VIEW
PythonSettings BALL::VIEW::PythonSettings
PythonSettings BALL::VIEW
PythonValidator BALL::VIEW
PythonValidator BALL::VIEW::PythonValidator
PyWidget BALL::VIEW
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