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Sample
BALL::NMRStarFile::Sample
searchTextChanged
BALL::VIEW::ShortcutDialog
send
BALL::RingPerceptionProcessor::TNode_
sendObject
BALL::VIEW::ServerWidget::BALLViewServer
set
BALL::Exception::GlobalExceptionHandler::set()
BALL::Composite::set()
BALL::PropertyManager::set()
BALL::Selectable::set()
BALL::PreciseTime::set(long secs, long usecs)
BALL::PreciseTime::set(const PreciseTime &time)
BALL::BitVector::set(const BitVector &bit_vector)
BALL::BitVector::set(const char *bit_string)
BALL::HashGrid3::set(const Vector3 &origin, const Vector3 &unit, Size dimension_x, Size dimension_y, Size dimension_z)
BALL::HashGrid3::set(const Vector3 &origin, float unit, Size size)
BALL::HashGrid3::set(const HashGrid3 &grid, bool deep=true)
BALL::HashSet::set()
BALL::List::set()
BALL::Options::set()
BALL::Quadruple::set()
BALL::RegularExpression::set(const RegularExpression ®ular_expression)
BALL::RegularExpression::set(const String &pattern, bool wildcard_pattern=false)
BALL::String::set(const String &s)
BALL::String::set(const String &string, Index from, Size len=EndPos)
BALL::String::set(const char *char_ptr, Index from=0, Size len=EndPos)
BALL::String::set(Size buffer_size, const char *format,...)
BALL::String::set(std::strstream &s)
BALL::String::set(char c, Size len=1)
BALL::String::set(unsigned char uc)
BALL::String::set(short s)
BALL::String::set(unsigned short us)
BALL::String::set(int i)
BALL::String::set(unsigned int ui)
BALL::String::set(long l)
BALL::String::set(unsigned long ul)
BALL::String::set(float f)
BALL::String::set(double d)
BALL::Substring::set(const String &string)
BALL::Substring::set(const Substring &s)
BALL::Substring::set(const char *char_ptr, Size size=String::EndPos)
BALL::StringHashMap::set()
BALL::Triple::set()
BALL::PDB::Residue::set()
BALL::ResourceEntry::set()
BALL::Atom::set()
BALL::AtomContainer::set()
BALL::Chain::set()
BALL::Molecule::set()
BALL::NucleicAcid::set()
BALL::Nucleotide::set()
BALL::PDBAtom::set()
BALL::Protein::set()
BALL::Residue::set()
BALL::SecondaryStructure::set()
BALL::System::set()
BALL::TAngle::set(const T &new_value, bool radian=true)
BALL::TAngle::set(const TAngle &angle)
BALL::TBox3::set()
BALL::TCircle3::set(const TCircle3 &circle)
BALL::TCircle3::set(const TVector3< T > &point, const TVector3< T > &normal, const T &rad)
BALL::TLine3::set(const TLine3 &line)
BALL::TLine3::set(const TVector3< T > &point, const TVector3< T > &vector, Form form=FORM__PARAMETER)
BALL::TMatrix4x4::set(const T *ptr)
BALL::TMatrix4x4::set(const T ptr[4][4])
BALL::TMatrix4x4::set(const TMatrix4x4 &m)
BALL::TMatrix4x4::set(const TVector4< T > &col1, const TVector4< T > &col2, const TVector4< T > &col3, const TVector4< T > &col4)
BALL::TMatrix4x4::set(const T &m11, const T &m12, const T &m13, const T &m14, const T &m21, const T &m22, const T &m23, const T &m24, const T &m31, const T &m32, const T &m33, const T &m34, const T &m41, const T &m42, const T &m43, const T &m44)
BALL::TMatrix4x4::set(const T &t=(T) 1)
BALL::PiecewiseFunction::set()
BALL::PiecewisePolynomial::set()
BALL::TPlane3::set(const TPlane3 &plane)
BALL::TPlane3::set(const TVector3< T > &point, const TVector3< T > &normal)
BALL::TPlane3::set(const TVector3< T > &a, const TVector3< T > &b, const TVector3< T > &c)
BALL::TQuaternion::set(const TQuaternion &q)
BALL::TQuaternion::set(const boost::math::quaternion< T > &q)
BALL::TQuaternion::set(const TVector3< T > &axis, const T &angle)
BALL::TQuaternion::set(const T &w, const T &i, const T &j, const T &k)
BALL::TSimpleBox3::set(const TSimpleBox3 &box)
BALL::TSimpleBox3::set(const TVector3< T > &lower, const TVector3< T > &upper)
BALL::TSimpleBox3::set(const T &ax, const T &ay, const T &az, const T &bx, const T &by, const T &bz)
BALL::TSphere3::set(const TSphere3 &sphere)
BALL::TSphere3::set(const TVector3< T > &point, const T &r)
BALL::TSurface::set()
BALL::TVector2::set(const T &value)
BALL::TVector2::set(const T &vx, const T &vy)
BALL::TVector2::set(const TVector2 &vector)
BALL::TVector3::set(const T *ptr)
BALL::TVector3::set(const T &value)
BALL::TVector3::set(const T &vx, const T &vy, const T &vz)
BALL::TVector3::set(const TVector3 &vector)
BALL::TVector3::set(const T &r, const TAngle< T > &phi, const TAngle< T > &theta)
BALL::TVector4::set(const T *ptr)
BALL::TVector4::set(const T &rx, const T &ry, const T &rz, const T &rh=(T) 1)
BALL::TVector4::set(const TVector4 &vector)
BALL::TVector4::set(const T &value=(T) 1)
BALL::AtomVector::set(const AtomVector &atoms)
BALL::AtomVector::set(const Composite &composite, bool selected_only=false)
BALL::Gradient::set(const Gradient &gradient)
BALL::Gradient::set(const AtomVector &atoms)
BALL::RuleProcessor::set()
BALL::MolecularDynamics::set()
BALL::CosineTorsion::Values::set()
BALL::GraphEdge::set(const GraphEdge< Vertex, Edge, Face > &edge, bool deep=false)
BALL::GraphEdge::set(Vertex *vertex0, Vertex *vertex1, Face *face0, Face *face1, Index index)
BALL::GraphFace::set()
BALL::GraphTriangle::set(const GraphTriangle< Vertex, Edge, Face > &face, bool deep=false)
BALL::GraphTriangle::set(Vertex *vertex1, Vertex *vertex2, Vertex *vertex3, Edge *edge1, Edge *edge2, Edge *edge3, Index index)
BALL::GraphVertex::set()
BALL::ReducedSurface::set()
BALL::RSEdge::set(const RSEdge &rsedge, bool deep=false)
BALL::RSEdge::set(RSVertex *vertex0, RSVertex *vertex1, RSFace *face0, RSFace *face1, const TVector3< double > ¢er_of_torus, const double &radius_of_torus, const TAngle< double > &angle, const TCircle3< double > &circle0, const TCircle3< double > &circle1, const TVector3< double > &intersection_point0, const TVector3< double > &intersection_point1, bool singular, Index index)
BALL::RSFace::set(const RSFace &rsface, bool deep=false)
BALL::RSFace::set(RSVertex *vertex1, RSVertex *vertex2, RSVertex *vertex3, RSEdge *edge1, RSEdge *edge2, RSEdge *edge3, const TVector3< double > ¢er, const TVector3< double > &normal, bool singular, Index index)
BALL::RSVertex::set()
BALL::SASEdge::set(const SASEdge &sasedge, bool deep=false)
BALL::SASEdge::set(SASVertex *vertex0, SASVertex *vertex1, SASFace *face0, SASFace *face1, const TCircle3< double > &circle, const TAngle< double > &angle, Index index)
BALL::SASFace::set()
BALL::SASVertex::set(const SASVertex &sasvertex, bool deep=false)
BALL::SASVertex::set(const TVector3< double > point, Index index)
BALL::SESEdge::set(const SESEdge &sesedge, bool deep=false)
BALL::SESEdge::set(SESVertex *vertex0, SESVertex *vertex1, SESFace *face0, SESFace *face1, const TCircle3< double > &circle, RSEdge *rsedge, Type type, Index index)
BALL::SESFace::set()
BALL::SESVertex::set(const SESVertex &sesvertex, bool deep=false)
BALL::SESVertex::set(const TVector3< double > point, const TVector3< double > &normal, Index atom, Index index)
BALL::StructureMapper::set()
BALL::Triangle::set()
BALL::TrianglePoint::set()
BALL::TriangulatedSAS::set()
BALL::TriangulatedSES::set()
BALL::TriangulatedSurface::set()
BALL::TriangulatedSphere::set()
BALL::Directory::set(const String &directory_path, bool set_current=false)
BALL::Directory::set(const Directory &directory)
BALL::VIEW::ColorExtension2::set()
BALL::VIEW::MultiColorExtension::set()
BALL::VIEW::ColorHSV::set(const ColorHSV &color)
BALL::VIEW::ColorHSV::set(const ColorRGBA &color)
BALL::VIEW::ColorHSV::set(const char *value)
BALL::VIEW::ColorHSV::set(const String &value)
BALL::VIEW::ColorHSV::set(const ColorUnitHue &hue, const ColorUnit &saturation, const ColorUnit &value)
BALL::VIEW::ColorRGBA::set(const ColorRGBA &color)
BALL::VIEW::ColorRGBA::set(const ColorHSV &color)
BALL::VIEW::ColorRGBA::set(const char *value)
BALL::VIEW::ColorRGBA::set(const String &value)
BALL::VIEW::ColorRGBA::set(const QColor &color)
BALL::VIEW::ColorRGBA::set(const ColorUnit &red_value, const ColorUnit &green_value, const ColorUnit &blue_value, const ColorUnit &alpha_value=(float) 1)
BALL::VIEW::ColorUnit::set(const ColorUnit &color_unit)
BALL::VIEW::ColorUnit::set(const char *value)
BALL::VIEW::ColorUnit::set(const String &value)
BALL::VIEW::ColorUnit::set(const unsigned char value)
BALL::VIEW::ColorUnit::set(const short value)
BALL::VIEW::ColorUnit::set(const unsigned short value)
BALL::VIEW::ColorUnit::set(const int value)
BALL::VIEW::ColorUnit::set(const unsigned int value)
BALL::VIEW::ColorUnit::set(const long value)
BALL::VIEW::ColorUnit::set(const unsigned long value)
BALL::VIEW::ColorUnit::set(const float value)
BALL::VIEW::ColorUnit::set(const double value)
BALL::VIEW::ColorUnitHue::set(const ColorUnitHue &color_unit_hue)
BALL::VIEW::ColorUnitHue::set(const char *value)
BALL::VIEW::ColorUnitHue::set(const String &value)
BALL::VIEW::ColorUnitHue::set(const short value)
BALL::VIEW::ColorUnitHue::set(const unsigned short value)
BALL::VIEW::ColorUnitHue::set(const int value)
BALL::VIEW::ColorUnitHue::set(const unsigned int value)
BALL::VIEW::ColorUnitHue::set(const long value)
BALL::VIEW::ColorUnitHue::set(const unsigned long value)
BALL::VIEW::ColorUnitHue::set(const float value)
BALL::VIEW::ColorUnitHue::set(const double value)
BALL::VIEW::ColorUnitHue::set(const long double value)
BALL::VIEW::Dataset::set()
BALL::VIEW::Vertex::set()
BALL::VIEW::Vertex2::set()
BALL::VIEW::GeometricObject::set()
BALL::VIEW::AtomBondModelBaseProcessor::set()
BALL::VIEW::AddBallAndStickModel::set()
BALL::VIEW::ColorProcessor::set()
BALL::VIEW::HBondModelProcessor::set()
BALL::VIEW::Box::set()
BALL::VIEW::Disc::set()
BALL::VIEW::Label::set()
BALL::VIEW::Line::set()
BALL::VIEW::Mesh::set()
BALL::VIEW::MultiLine::set()
BALL::VIEW::Point::set()
BALL::VIEW::SimpleBox::set()
BALL::VIEW::Sphere::set()
BALL::VIEW::Tube::set()
BALL::VIEW::TwoColoredLine::set()
BALL::VIEW::TwoColoredTube::set()
BALL::VIEW::Hotkey::set()
BALL::VIEW::Scene::set()
setChain
BALL::NMRStarFile::BALLToBMRBMapper
setContentSize
BALL::VIEW::MainControl
setDefaultPage
BALL::VIEW::HelpViewer
setDeleteEntryEnabled
BALL::VIEW::MainControl
setErrorText
BALL::VIEW::EditSingleShortcut
setFile
BALL::Exception::GlobalExceptionHandler
setKw
BALL::QSAR::ALLModel
setLabelText_
BALL::VIEW::ModelSettingsDialog
setLinked
BALL::ConnectedToPredicate::CTPNode
setLocked
BALL::VIEW::ServerWidget::BALLViewServer
setMMFF94
BALL::VIEW::MMFF94ConfigurationDialog
setObject
BALL::VIEW::RegisterHelpSystemMessage
setOmega
BALL::Peptides::AminoAcidDescriptor
setPhi
BALL::Peptides::AminoAcidDescriptor
setProperty
BALL::PropertyManager::setProperty(Property property)
BALL::PropertyManager::setProperty(const NamedProperty &property)
BALL::PropertyManager::setProperty(const string &name)
BALL::PropertyManager::setProperty(const string &name, bool value)
BALL::PropertyManager::setProperty(const string &name, int value)
BALL::PropertyManager::setProperty(const string &name, unsigned int value)
BALL::PropertyManager::setProperty(const string &name, float value)
BALL::PropertyManager::setProperty(const string &name, double value)
BALL::PropertyManager::setProperty(const string &name, const string &value)
BALL::PropertyManager::setProperty(const string &name, const PersistentObject &value)
BALL::SmartsParser::SPAtom::setProperty(PropertyType type, int int_value)
BALL::SmartsParser::SPAtom::setProperty(PropertyType type, bool flag)
BALL::SmartsParser::SPAtom::setProperty(PropertyType type, const Element *element)
BALL::SmartsParser::SPAtom::setProperty(PropertyType type, ChiralClass chirality)
BALL::SmartsParser::SPAtom::setProperty(Property property)
setPsi
BALL::Peptides::AminoAcidDescriptor
setQ2
BALL::QSAR::RegressionValidation
setRS
BALL::SolventAccessibleSurface
setShortcutText
BALL::VIEW::EditSingleShortcut
setStyle
BALL::VIEW::MainControlPreferences
setTexture
BALL::VIEW::GridVisualisation
setTextureUpDirection_
BALL::VIEW::StageSettings
setTo
BALL::TContourSurface::Cube
setType_
BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
setup
BALL::RandomNumberGenerator::setup()
BALL::AmberBend::setup()
BALL::AmberNonBonded::setup()
BALL::AmberStretch::setup()
BALL::AmberTorsion::setup()
BALL::CharmmBend::setup()
BALL::CharmmImproperTorsion::setup()
BALL::CharmmNonBonded::setup()
BALL::CharmmStretch::setup()
BALL::CharmmTorsion::setup()
BALL::ForceField::setup(System &system)
BALL::ForceField::setup(System &system, const Options &options)
BALL::ForceFieldComponent::setup()
BALL::PeriodicBoundary::setup()
BALL::SnapShotManager::setup(System *my_system, const ForceField *my_forcefield, TrajectoryFile *my_snapshot_file)
BALL::SnapShotManager::setup(System *my_system, TrajectoryFile *my_snapshot_file)
BALL::SnapShotManager::setup()
BALL::CanonicalMD::setup(ForceField &force_field, SnapShotManager *ssm=0)
BALL::CanonicalMD::setup(ForceField &force_field, SnapShotManager *ssm, const Options &options)
BALL::MicroCanonicalMD::setup(ForceField &myforcefield, SnapShotManager *ssm)
BALL::MicroCanonicalMD::setup(ForceField &myforcefield, SnapShotManager *ssm, const Options &myoptions)
BALL::MolecularDynamics::setup(ForceField &force_field, SnapShotManager *snapshot_man)
BALL::MolecularDynamics::setup(ForceField &forcefield, SnapShotManager *snapshot_man, const Options &myoptions)
BALL::EnergyMinimizer::setup(ForceField &force_field)
BALL::EnergyMinimizer::setup(ForceField &force_field, SnapShotManager *ssm)
BALL::EnergyMinimizer::setup(ForceField &force_field, SnapShotManager *ssm, const Options &options)
BALL::EnergyMinimizer::setup(ForceField &force_field, const Options &options)
BALL::MMFF94NonBonded::setup()
BALL::MMFF94OutOfPlaneBend::setup()
BALL::MMFF94ChargeProcessor::setup()
BALL::MMFF94StretchBend::setup()
BALL::MMFF94Torsion::setup()
BALL::ScoringComponent::setup()
BALL::ScoringFunction::setup()
BALL::ScoringFunction::setup(Molecule &receptor, Molecule &ligand)
BALL::ScoringFunction::setup(Molecule &receptor, Molecule &ligand, const Options &options)
BALL::ScoringTypes::setup()
BALL::AromaticRingStacking::setup()
BALL::BuriedPolar::setup()
BALL::CHPI::setup()
BALL::HydrogenBond::setup()
BALL::Lipophilic::setup()
BALL::ChemScoreMetal::setup()
BALL::NonpolarSolvation::setup()
BALL::PolarSolvation::setup()
BALL::RotationalEntropyLoss::setup()
BALL::VanDerWaals::setup()
BALL::FresnoTypes::setup()
BALL::GeneralizedBornModel::setup()
BALL::FDPB::setup(System &system)
BALL::FDPB::setup(System &system, Options &options)
BALL::AtomTyper::setup()
BALL::DNAMutator::setup()
BALL::ConformationSet::setup()
BALL::DockingAlgorithm::setup(System &system1, System &system2, Options &new_options)
BALL::DockingAlgorithm::setup(System &system1, System &system2)
BALL::GeometricFit::setup(System &system1, System &system2, Options &new_options)
BALL::GeometricFit::setup(System &system1, System &system2)
BALL::Kekuliser::setup()
BALL::VIEW::EditSingleShortcut::setup()
BALL::VIEW::SnapshotManagerInterface::setup()
BALL::VIEW::FakeDriver::setUp()
BALL::VIEW::InputDeviceDriver::setUp()
showEntry
BALL::VIEW::Preferences
showText
BALL::VIEW::Scene
shrink
BALL::TriangulatedSurface
sort
BALL::ResidueRotamerSet::sort()
BALL::RotamerLibrary::sort()
BALL::SESSingularityCleaner::sort(SESFace *face1, SESFace *face2, std::vector< SESEdge * > &sesedge1, std::vector< SESEdge * > &sesedge2, std::vector< SESVertex * > &sesvertex1, std::vector< SESVertex * > &sesvertex2)
BALL::SESSingularityCleaner::sort(Index u1, Index u2, Index u3, Index &s1, Index &s2, Index &s3)
Sphere_
BALL::BindingPocketProcessor::Sphere_
sq
BALL::QSAR::Statistics
sslErrors
BALL::SimpleDownloaderHelper::BasicHelper
stop_
BALL::VIEW::SnapshotVisualisationDialog
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