| aromatic_rings_ (defined in AtomTyper) | AtomTyper | [protected] |
| assignSpecificValues_(Atom &) | AtomTyper | [protected, virtual] |
| assignTo(System &s) (defined in AtomTyper) | AtomTyper | [virtual] |
| assignTo(Molecule &mol) (defined in AtomTyper) | AtomTyper | [protected] |
| atoms_ (defined in AtomTyper) | AtomTyper | [protected] |
| AtomTyper() (defined in AtomTyper) | AtomTyper | |
| AtomTyper(const AtomTyper &t) (defined in AtomTyper) | AtomTyper | |
| element_to_rules_ (defined in AtomTyper) | AtomTyper | [protected] |
| fields_ (defined in AtomTyper) | AtomTyper | [protected] |
| names_ (defined in AtomTyper) | AtomTyper | [protected] |
| number_expected_fields_ (defined in AtomTyper) | AtomTyper | [protected] |
| rings_ (defined in AtomTyper) | AtomTyper | [protected] |
| rule_times (defined in AtomTyper) | AtomTyper | [static] |
| rules_ (defined in AtomTyper) | AtomTyper | [protected] |
| setAromaticRings(const vector< HashSet< Atom * > > &rings) (defined in AtomTyper) | AtomTyper | |
| setRings(const vector< HashSet< Atom * > > &rings) (defined in AtomTyper) | AtomTyper | |
| setup(const String &filename) | AtomTyper | |
| specificSetup_() | AtomTyper | [protected, virtual] |
| types_ (defined in AtomTyper) | AtomTyper | [protected] |
| ~AtomTyper() (defined in AtomTyper) | AtomTyper | [virtual] |