, including all inherited members.
| argument_pointer typedef (defined in UnaryFunctor< AtomContainer, Processor::Result >) | UnaryFunctor< AtomContainer, Processor::Result > | |
| argument_reference typedef (defined in UnaryFunctor< AtomContainer, Processor::Result >) | UnaryFunctor< AtomContainer, Processor::Result > | |
| argument_type typedef (defined in UnaryFunctor< AtomContainer, Processor::Result >) | UnaryFunctor< AtomContainer, Processor::Result > | |
| BALL_CREATE(BuildBondsProcessor) (defined in BuildBondsProcessor) | BuildBondsProcessor | |
| bond_lengths_ | BuildBondsProcessor | [protected] |
| buildBondsHashGrid3_(AtomContainer &ac) | BuildBondsProcessor | [protected] |
| BuildBondsProcessor() | BuildBondsProcessor | |
| BuildBondsProcessor(const BuildBondsProcessor &bbp) | BuildBondsProcessor | |
| BuildBondsProcessor(const String &file_name) | BuildBondsProcessor | |
| const_argument_pointer typedef (defined in UnaryFunctor< AtomContainer, Processor::Result >) | UnaryFunctor< AtomContainer, Processor::Result > | |
| const_argument_reference typedef (defined in UnaryFunctor< AtomContainer, Processor::Result >) | UnaryFunctor< AtomContainer, Processor::Result > | |
| deleteOverestimatedBonds_(AtomContainer &ac) | BuildBondsProcessor | [protected] |
| estimateBondOrders_(AtomContainer &ac) | BuildBondsProcessor | [protected] |
| finish() | UnaryProcessor< AtomContainer > | [virtual] |
| getMaxBondLength_(float &length, Size an1, Size an2) (defined in BuildBondsProcessor) | BuildBondsProcessor | [protected] |
| getMinBondLength_(float &length, Size an1, Size an2) (defined in BuildBondsProcessor) | BuildBondsProcessor | [protected] |
| getNearestBondOrder_(float length, Size e1, Size e2) (defined in BuildBondsProcessor) | BuildBondsProcessor | [protected] |
| getNumberOfBondsBuilt() | BuildBondsProcessor | |
| max_bond_lengths_ | BuildBondsProcessor | [protected] |
| max_length_ | BuildBondsProcessor | [protected] |
| min_bond_lengths_ | BuildBondsProcessor | [protected] |
| num_bonds_ | BuildBondsProcessor | [protected] |
| operator()(AtomContainer &ac) | BuildBondsProcessor | [virtual] |
| operator=(const BuildBondsProcessor &bbp) | BuildBondsProcessor | |
| options | BuildBondsProcessor | |
| readBondLengthsFromFile_(const String &file_name="") | BuildBondsProcessor | [protected] |
| reestimateBondOrdersRings_(AtomContainer &ac) | BuildBondsProcessor | [protected] |
| result_type typedef (defined in UnaryFunctor< AtomContainer, Processor::Result >) | UnaryFunctor< AtomContainer, Processor::Result > | |
| setBondLengths(const String &file_name) | BuildBondsProcessor | |
| setDefaultOptions() | BuildBondsProcessor | |
| start() | BuildBondsProcessor | [virtual] |
| UnaryProcessor() | UnaryProcessor< AtomContainer > | |
| UnaryProcessor(const UnaryProcessor &) | UnaryProcessor< AtomContainer > | |
| ~BuildBondsProcessor() | BuildBondsProcessor | [virtual] |
| ~UnaryProcessor() | UnaryProcessor< AtomContainer > | [virtual] |