| clear() | MMFF94AtomTypeEquivalences | [virtual] |
| equiv_ (defined in MMFF94ParametersBase) | MMFF94ParametersBase | [protected] |
| equivalences_ (defined in MMFF94AtomTypeEquivalences) | MMFF94AtomTypeEquivalences | [protected] |
| exists_ (defined in MMFF94AtomTypeEquivalences) | MMFF94AtomTypeEquivalences | [protected] |
| getEquivalence(Position original, Position number) const | MMFF94AtomTypeEquivalences | |
| is_initialized_ (defined in MMFF94ParametersBase) | MMFF94ParametersBase | [protected] |
| isInitialized() (defined in MMFF94ParametersBase) | MMFF94ParametersBase | |
| MMFF94AtomTypeEquivalences() (defined in MMFF94AtomTypeEquivalences) | MMFF94AtomTypeEquivalences | |
| MMFF94AtomTypeEquivalences(const MMFF94AtomTypeEquivalences &to_copy) (defined in MMFF94AtomTypeEquivalences) | MMFF94AtomTypeEquivalences | |
| MMFF94ParametersBase() | MMFF94ParametersBase | |
| names_ (defined in MMFF94AtomTypeEquivalences) | MMFF94AtomTypeEquivalences | [protected] |
| number_expected_fields_ (defined in MMFF94ParametersBase) | MMFF94ParametersBase | [protected] |
| operator=(const MMFF94ParametersBase &) | MMFF94ParametersBase | |
| readParameters(const String &filename) (defined in MMFF94ParametersBase) | MMFF94ParametersBase | |
| setEquivalences(const MMFF94AtomTypeEquivalences &equi) (defined in MMFF94ParametersBase) | MMFF94ParametersBase | |
| setup_(const vector< vector< String > > &) (defined in MMFF94AtomTypeEquivalences) | MMFF94AtomTypeEquivalences | [protected, virtual] |
| ~MMFF94AtomTypeEquivalences() (defined in MMFF94AtomTypeEquivalences) | MMFF94AtomTypeEquivalences | |
| ~MMFF94ParametersBase() | MMFF94ParametersBase | [virtual] |