| clear() | MMFF94NonBonded | [virtual] |
| determineMethodOfAtomPairGeneration() | MMFF94NonBonded | [virtual] |
| energy_ (defined in ForceFieldComponent) | ForceFieldComponent | [protected] |
| es_energy_ (defined in MMFF94NonBonded) | MMFF94NonBonded | [protected] |
| force_field_ (defined in ForceFieldComponent) | ForceFieldComponent | [protected] |
| ForceFieldComponent() | ForceFieldComponent | |
| ForceFieldComponent(ForceField &force_field) | ForceFieldComponent | |
| ForceFieldComponent(const ForceFieldComponent &force_field_component) | ForceFieldComponent | |
| getAtomPairs() const (defined in MMFF94NonBonded) | MMFF94NonBonded | |
| getEnergy() const | ForceFieldComponent | [virtual] |
| getESEnergy() const (defined in MMFF94NonBonded) | MMFF94NonBonded | |
| getForceField() const | ForceFieldComponent | |
| getName() const | ForceFieldComponent | |
| getNonBondedData() const (defined in MMFF94NonBonded) | MMFF94NonBonded | |
| getVDWEnergy() const (defined in MMFF94NonBonded) | MMFF94NonBonded | |
| isEnabled() const (defined in ForceFieldComponent) | ForceFieldComponent | |
| MMFF94NonBonded() | MMFF94NonBonded | |
| MMFF94NonBonded(ForceField &force_field) | MMFF94NonBonded | |
| MMFF94NonBonded(const MMFF94NonBonded &MMFF94_non_bonded) | MMFF94NonBonded | |
| operator=(const MMFF94NonBonded &anb) | MMFF94NonBonded | |
| operator==(const MMFF94NonBonded &anb) | MMFF94NonBonded | |
| setEnabled(bool state) (defined in ForceFieldComponent) | ForceFieldComponent | |
| setForceField(ForceField &force_field) | ForceFieldComponent | |
| setName(const String &name) | ForceFieldComponent | |
| setup() | MMFF94NonBonded | [virtual] |
| update() | MMFF94NonBonded | [virtual] |
| updateEnergy() | MMFF94NonBonded | [virtual] |
| updateForces() | MMFF94NonBonded | [virtual] |
| vdw_energy_ (defined in MMFF94NonBonded) | MMFF94NonBonded | [protected] |
| ~ForceFieldComponent() | ForceFieldComponent | [virtual] |
| ~MMFF94NonBonded() | MMFF94NonBonded | [virtual] |