| addSolvent(const String &filename) const | PeriodicBoundary | |
| AtomIndexArray typedef (defined in PeriodicBoundary) | PeriodicBoundary | |
| AtomIndexPair typedef (defined in PeriodicBoundary) | PeriodicBoundary | |
| clear() | PeriodicBoundary | [virtual] |
| disable() | PeriodicBoundary | |
| enable() | PeriodicBoundary | |
| generateMoleculesVector() | PeriodicBoundary | |
| getBox() const | PeriodicBoundary | |
| isEnabled() const | PeriodicBoundary | |
| operator=(const PeriodicBoundary &periodic_boundary) | PeriodicBoundary | |
| options | PeriodicBoundary | |
| PeriodicBoundary() | PeriodicBoundary | |
| PeriodicBoundary(const ForceField &force_field) | PeriodicBoundary | |
| PeriodicBoundary(const PeriodicBoundary &periodic_boundary) | PeriodicBoundary | |
| removeSolvent() const | PeriodicBoundary | |
| setBox(const SimpleBox3 &box) | PeriodicBoundary | |
| setup() | PeriodicBoundary | |
| updateMolecules() | PeriodicBoundary | |
| ~PeriodicBoundary() | PeriodicBoundary | [virtual] |