| applyFirstSnapShot() | SnapShotManager | [virtual] |
| applyLastSnapShot() | SnapShotManager | [virtual] |
| applyNextSnapShot() | SnapShotManager | [virtual] |
| applySnapShot(Size number) | SnapShotManager | [virtual] |
| buffer_counter_ (defined in SnapShotManager) | SnapShotManager | [protected] |
| calculateKineticEnergy_() (defined in SnapShotManager) | SnapShotManager | [protected] |
| clear() | SnapShotManager | [virtual] |
| clearBuffer() | SnapShotManager | |
| current_snapshot_ (defined in SnapShotManager) | SnapShotManager | [protected] |
| flush_to_disk_frequency_ (defined in SnapShotManager) | SnapShotManager | [protected] |
| flushToDisk() | SnapShotManager | [virtual] |
| force_field_ptr_ (defined in SnapShotManager) | SnapShotManager | [protected] |
| getCurrentSnapshotNumber() const (defined in SnapShotManager) | SnapShotManager | |
| getFlushToDiskFrequency() const | SnapShotManager | |
| getForceField() const | SnapShotManager | |
| getNumberOfSnapShotsInBuffer() (defined in SnapShotManager) | SnapShotManager | |
| getSystem() const | SnapShotManager | |
| getTrajectoryFile() const | SnapShotManager | |
| isValid() const | SnapShotManager | [virtual] |
| operator=(const SnapShotManager &manager) | SnapShotManager | |
| options | SnapShotManager | |
| readFromFile() | SnapShotManager | |
| setFlushToDiskFrequency(Size number) | SnapShotManager | |
| setForceField(const ForceField *my_ff) | SnapShotManager | |
| setSystem(System *my_system) | SnapShotManager | |
| setTrajectoryFile(TrajectoryFile *my_file) | SnapShotManager | |
| setup(System *my_system, const ForceField *my_forcefield, TrajectoryFile *my_snapshot_file) | SnapShotManager | |
| setup() | SnapShotManager | [virtual] |
| snapshot_buffer_ (defined in SnapShotManager) | SnapShotManager | [protected] |
| SnapShotManager() | SnapShotManager | |
| SnapShotManager(System *my_system, const ForceField *my_force_field, TrajectoryFile *my_snapshot_file) | SnapShotManager | |
| SnapShotManager(System *my_system, const ForceField *my_force_field, const Options &my_options, TrajectoryFile *file) | SnapShotManager | |
| SnapShotManager(const SnapShotManager &manager) | SnapShotManager | |
| system_ptr_ (defined in SnapShotManager) | SnapShotManager | [protected] |
| takeSnapShot() | SnapShotManager | [virtual] |
| trajectory_file_ptr_ (defined in SnapShotManager) | SnapShotManager | [protected] |
| ~SnapShotManager() | SnapShotManager | [virtual] |