assign(System &system, bool overwrite_existing_typenames=true, bool overwrite_non_zero_charges=true) const | Templates | |
assignCharges(System &system, bool overwrite_non_zero_charges=true) const | Templates | |
assignTypeNames(System &system, bool overwrite_existing_typenames=true) const | Templates | |
charges_ (defined in Templates) | Templates | [protected] |
clear() | Templates | [virtual] |
entries_ (defined in ParameterSection) | ParameterSection | [protected] |
extractSection(Parameters ¶meters, const String §ion_name) | Templates | [virtual] |
format_line_ (defined in ParameterSection) | ParameterSection | [protected] |
getCharge(const String &name) const | Templates | |
getColumnIndex(const String &variable) const | ParameterSection | |
getKey(Position key_index) const | ParameterSection | |
getMaximumUnassignedAtoms() const | Templates | |
getNumberOfKeys() const | ParameterSection | |
getNumberOfUnassignedAtoms() const | Templates | |
getNumberOfVariables() const | ParameterSection | |
getSectionName() const | ParameterSection | |
getTypeName(const String &name) const | Templates | |
getUnassignedAtoms() | Templates | |
getValue(const String &key, const String &variable) const | ParameterSection | |
getValue(Position key_index, Position variable_index) const | ParameterSection | |
has(const String &name) const | Templates | |
ParameterSection::has(const String &key, const String &variable) const | ParameterSection | |
hasVariable(const String &variable) const | ParameterSection | |
isValid() const | ParameterSection | [virtual] |
keys_ (defined in ParameterSection) | ParameterSection | [protected] |
MAX_FIELDS enum value (defined in ParameterSection) | ParameterSection | |
max_number_unassigned_atoms_ (defined in Templates) | Templates | [protected] |
number_of_variables_ (defined in ParameterSection) | ParameterSection | [protected] |
operator=(const Templates &templates) | Templates | |
ParameterSection::operator=(const ParameterSection §ion) | ParameterSection | |
operator==(const ParameterSection ¶meter_section) const | ParameterSection | |
options | ParameterSection | |
ParameterSection() | ParameterSection | |
ParameterSection(const ParameterSection ¶meter_section) | ParameterSection | |
section_entries_ (defined in ParameterSection) | ParameterSection | [protected] |
section_name_ (defined in ParameterSection) | ParameterSection | [protected] |
setMaximumUnassignedAtoms(Size nr) | Templates | |
Templates() | Templates | |
Templates(const Templates &templates, bool deep=true) | Templates | |
type_names_ (defined in Templates) | Templates | [protected] |
unassigned_atoms_ (defined in Templates) | Templates | [protected] |
UNDEFINED | ParameterSection | [static] |
valid_ (defined in ParameterSection) | ParameterSection | [protected] |
variable_names_ (defined in ParameterSection) | ParameterSection | [protected] |
version_ (defined in ParameterSection) | ParameterSection | [protected] |
~ParameterSection() | ParameterSection | [virtual] |
~Templates() | Templates | [virtual] |