BALL::NMRStarFile Member List

This is the complete list of members for BALL::NMRStarFile, including all inherited members.
atom_data_sets_BALL::NMRStarFile [private]
ATOM_GROUP enum valueBALL::NMRStarFile [private]
ATOM_TYPE enum valueBALL::NMRStarFile [private]
clear()BALL::NMRStarFile [virtual]
close()BALL::File
copy(String source_name, String destination_name, Size buffer_size=4096)BALL::File [static]
copyTo(const String &destination_name, Size buffer_size=4096)BALL::File
createTemporaryFilename(String &temporary)BALL::File [static]
DIRECT_TYPE enum valueBALL::NMRStarFile
disableTransformation(Transformation transformation)BALL::File [static]
enableTransformation(Transformation transformation)BALL::File [static]
enableTrimWhitespaces(bool state)BALL::LineBasedFile
EXTERNAL_REFERENCE enum valueBALL::NMRStarFile
File()BALL::File
File(const String &name, OpenMode open_mode=std::ios::in)BALL::File
File(const File &file)BALL::File
getData() const BALL::NMRStarFile
getField(Index pos=0, const String &quotes="", const String &delimiters=String::CHARACTER_CLASS__WHITESPACE) const BALL::LineBasedFile
getFileStream()BALL::File
getLine() const BALL::LineBasedFile
getLine()BALL::LineBasedFile
getLineNumber() const BALL::LineBasedFile
getName() const BALL::File
getNumberOfAtoms() const BALL::NMRStarFile
getOpenMode() const BALL::File
getOriginalName() const BALL::File
getSize()BALL::File
getSize(String name)BALL::File [static]
getTransformationManager()BALL::File
getTransformationManager() const BALL::File
getType(String name, bool trace_link)BALL::File [static]
getType(bool trace_link) const BALL::File
gotoLine(Position line_number)BALL::LineBasedFile
has(const String &text) const BALL::LineBasedFile
INDIRECT_SHIFT_RATIO enum valueBALL::NMRStarFile [private]
INDIRECT_TYPE enum valueBALL::NMRStarFile
initializeReferenceOptions_()BALL::NMRStarFile [private, static]
INTERNAL_REFERENCE enum valueBALL::NMRStarFile
is_open_BALL::File [protected]
is_temporary_BALL::File [protected]
isAccessible(String name)BALL::File [static]
isAccessible() const BALL::File
isCanonized() const BALL::File
isClosed() const BALL::File
isExecutable(String name)BALL::File [static]
isExecutable() const BALL::File
isOpen() const BALL::File
ISOTOPE_NUMBER enum valueBALL::NMRStarFile [private]
isReadable(String name)BALL::File [static]
isReadable() const BALL::File
isTransformationEnabled(Transformation transformation)BALL::File [static]
isValid() const BALL::File
isWritable(String name)BALL::File [static]
isWritable() const BALL::File
line_BALL::LineBasedFile [protected]
line_number_BALL::LineBasedFile [protected]
LineBasedFile()BALL::LineBasedFile
LineBasedFile(const String &filename, File::OpenMode open_mode=std::ios::in, bool trim_whitespaces=false)BALL::LineBasedFile
LineBasedFile(const LineBasedFile &f)BALL::LineBasedFile
MODE_APPBALL::File [static]
MODE_ATEBALL::File [static]
MODE_BINARYBALL::File [static]
MODE_INBALL::File [static]
MODE_OUTBALL::File [static]
MODE_TRUNCBALL::File [static]
MOL_COMMON_NAME enum valueBALL::NMRStarFile [private]
move(const String &source_name, const String &destination_name)BALL::File [static]
moveTo(const String &destination_name)BALL::File
name_BALL::File [protected]
NMRStarFile()BALL::NMRStarFile
NMRStarFile(const NMRStarFile &f)BALL::NMRStarFile
NMRStarFile(const String &file_name)BALL::NMRStarFile
number_of_shifts_BALL::NMRStarFile [private]
open(const String &name, File::OpenMode open_mode=std::ios::in)BALL::File
open_mode_BALL::File [protected]
OpenMode typedefBALL::File
operator!=(const NMRStarFile &f)BALL::NMRStarFile
BALL::LineBasedFile::operator!=(const LineBasedFile &f)BALL::LineBasedFile
BALL::File::operator!=(const File &file) const BALL::File
operator=(const NMRStarFile &f)BALL::NMRStarFile
BALL::LineBasedFile::operator=(const LineBasedFile &file)BALL::LineBasedFile
BALL::File::operator=(const File &file)BALL::File
operator==(const NMRStarFile &f)BALL::NMRStarFile
BALL::LineBasedFile::operator==(const LineBasedFile &f)BALL::LineBasedFile
BALL::File::operator==(const File &file) const BALL::File
original_name_BALL::File [protected]
parseColumnFormat(const char *format, Position index, Size length, void *arg)BALL::LineBasedFile
processShiftLine_()BALL::NMRStarFile [private]
readEntryInformation_()BALL::NMRStarFile [private]
readLine()BALL::LineBasedFile
readMolSystem_()BALL::NMRStarFile [private]
readSampleConditions_()BALL::NMRStarFile [private]
readShiftReferences_()BALL::NMRStarFile [private]
readShifts_()BALL::NMRStarFile [private]
REFERENCE_METHOD enum valueBALL::NMRStarFile [private]
reference_options_BALL::NMRStarFile [private, static]
REFERENCE_TYPE enum valueBALL::NMRStarFile [private]
ReferenceMethod enum nameBALL::NMRStarFile
ReferenceType enum nameBALL::NMRStarFile
registerTransformation(const String &pattern, const String &exec)BALL::File [static]
remove(String name)BALL::File [static]
remove()BALL::File
rename(String old_path, String new_path)BALL::File [static]
renameTo(const String &new_path)BALL::File
reopen()BALL::File
reopen(File::OpenMode open_mode)BALL::File
rewind()BALL::LineBasedFile
sample_conditions_BALL::NMRStarFile [private]
search(const String &text, bool return_to_start=false)BALL::LineBasedFile
search(const String &text, const String &stop, bool return_to_start=false)BALL::LineBasedFile
setName(const String &name)BALL::File
shift_references_BALL::NMRStarFile [private]
SHIFT_UNITS enum valueBALL::NMRStarFile [private]
SHIFT_VALUE enum valueBALL::NMRStarFile [private]
ShiftReferenceTypes_ enum nameBALL::NMRStarFile [private]
skipLines(Size number=1)BALL::LineBasedFile
startsWith(const String &text) const BALL::LineBasedFile
switchString(const std::vector< String > &data) const BALL::LineBasedFile
system_name_BALL::NMRStarFile [private]
test(const char *file, int line, bool condition, const String &msg) const BALL::LineBasedFile
Transformation enum nameBALL::File
TRANSFORMATION__EXEC enum valueBALL::File
TRANSFORMATION__FILTER enum valueBALL::File
TRANSFORMATION__URL enum valueBALL::File
TRANSFORMATION_EXEC_PREFIXBALL::File [static]
TRANSFORMATION_FILE_PREFIXBALL::File [static]
TRANSFORMATION_FTP_PREFIXBALL::File [static]
TRANSFORMATION_HTTP_PREFIXBALL::File [static]
transformation_manager_BALL::File [protected, static]
transformation_methods_BALL::File [protected, static]
trim_whitespaces_BALL::LineBasedFile [protected]
trimWhiteSpacesEnabled() const BALL::LineBasedFile
truncate(String path, Size size=0)BALL::File [static]
truncate(Size size=0)BALL::File
Type enum nameBALL::File
TYPE__BLOCK_SPECIAL_FILE enum valueBALL::File
TYPE__CHAR_SPECIAL_FILE enum valueBALL::File
TYPE__DIRECTORY enum valueBALL::File
TYPE__FIFO_SPECIAL_FILE enum valueBALL::File
TYPE__REGULAR_FILE enum valueBALL::File
TYPE__SOCKET enum valueBALL::File
TYPE__SYMBOLIC_LINK enum valueBALL::File
TYPE__UNKNOWN enum valueBALL::File
UNKNOWN_REFERENCE enum valueBALL::NMRStarFile
UNKNOWN_TYPE enum valueBALL::NMRStarFile
unregisterTransformation(const String &pattern)BALL::File [static]
UNSET_REFERENCE enum valueBALL::NMRStarFile
UNSET_TYPE enum valueBALL::NMRStarFile
~File()BALL::File [virtual]
~NMRStarFile()BALL::NMRStarFile