, including all inherited members.
| all_small_beers_ | BALL::RingPerceptionProcessor | [protected, static] |
| all_small_rings_ | BALL::RingPerceptionProcessor | [protected, static] |
| argument_pointer typedef | BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
| argument_reference typedef | BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
| argument_type typedef | BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
| atom_to_tnode_ | BALL::RingPerceptionProcessor | [protected, static] |
| BalducciPearlmanAlgorithm_(std::vector< std::vector< Atom * > > &sssr, MolecularGraph &graph) | BALL::RingPerceptionProcessor | [protected] |
| BalducciPearlmanRingSelector_(BitVector bit_vector) | BALL::RingPerceptionProcessor | [protected, static] |
| BCC_ | BALL::RingPerceptionProcessor | [protected] |
| bond_to_index_ | BALL::RingPerceptionProcessor | [protected, static] |
| calculateSSSR(vector< vector< Atom * > > &sssr, AtomContainer &ac) | BALL::RingPerceptionProcessor | |
| checkEdges_(HashSet< Atom * > &ring_set, AtomContainer &ac) | BALL::RingPerceptionProcessor | [protected] |
| const_argument_pointer typedef | BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
| const_argument_reference typedef | BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
| DFSBCC_(std::vector< MolecularGraph * > &bccs, Size dfbi, HashMap< NodeItem< Index, Index > *, Size > DFBIndex, NodeItem< Index, Index > *v) | BALL::RingPerceptionProcessor | [protected] |
| FiguerasAlgorithm_(vector< vector< Atom * > > &sssr, AtomContainer &ac) | BALL::RingPerceptionProcessor | [protected] |
| findAllBCC(std::vector< MolecularGraph * > &bcc, MolecularGraph &graph) | BALL::RingPerceptionProcessor | |
| findAllBCC_(std::vector< MolecularGraph * > &bcc, MolecularGraph &graph) | BALL::RingPerceptionProcessor | [protected] |
| finish() | BALL::UnaryProcessor< AtomContainer > | [inline, virtual] |
| forwarded_rings_ | BALL::RingPerceptionProcessor | [protected, static] |
| getAllSmallRings() const | BALL::RingPerceptionProcessor | |
| getRing_(Atom *n, HashSet< Atom * > &ring_set) | BALL::RingPerceptionProcessor | [protected] |
| index_to_bond_ | BALL::RingPerceptionProcessor | [protected, static] |
| matrix_ | BALL::RingPerceptionProcessor | [protected, static] |
| operator()(AtomContainer &ac) | BALL::RingPerceptionProcessor | [virtual] |
| operator=(const RingPerceptionProcessor &rp) | BALL::RingPerceptionProcessor | |
| options | BALL::RingPerceptionProcessor | |
| P_ | BALL::RingPerceptionProcessor | [protected] |
| parents_ | BALL::RingPerceptionProcessor | [protected] |
| result_type typedef | BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
| RingPerceptionProcessor() | BALL::RingPerceptionProcessor | |
| RingPerceptionProcessor(const RingPerceptionProcessor &rp) | BALL::RingPerceptionProcessor | |
| rings_ | BALL::RingPerceptionProcessor | [protected, static] |
| setDefaultOptions() | BALL::RingPerceptionProcessor | |
| start() | BALL::UnaryProcessor< AtomContainer > | [inline, virtual] |
| tested_beers_ | BALL::RingPerceptionProcessor | [protected, static] |
| tnode_to_atom_ | BALL::RingPerceptionProcessor | [protected, static] |
| UnaryProcessor() | BALL::UnaryProcessor< AtomContainer > | [inline] |
| UnaryProcessor(const UnaryProcessor &) | BALL::UnaryProcessor< AtomContainer > | [inline] |
| visited_ | BALL::RingPerceptionProcessor | [protected] |
| visited_bonds_ | BALL::RingPerceptionProcessor | [protected] |
| ~RingPerceptionProcessor() | BALL::RingPerceptionProcessor | [virtual] |
| ~UnaryProcessor() | BALL::UnaryProcessor< AtomContainer > | [inline, virtual] |