, including all inherited members.
| AddBackboneModel() | BALL::VIEW::AddBackboneModel | |
| AddBackboneModel(const AddBackboneModel &add_Backbone_model) | BALL::VIEW::AddBackboneModel | |
| argument_pointer typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| argument_reference typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| argument_type typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| assignModelType(ModelPart &part) | BALL::VIEW::AddBackboneModel | [protected, virtual] |
| backbone_ | BALL::VIEW::AddBackboneModel | [protected] |
| calculateGuidePoints_() | BALL::VIEW::AddBackboneModel | [protected, virtual] |
| calculateModelParts(Protein &protein) | BALL::VIEW::AddBackboneModel | [protected, virtual] |
| calculateRibbonEllipse_(float ribbon_width, float ribbon_height) | BALL::VIEW::AddBackboneModel | [inline, protected] |
| calculateRibbonPoints_(Vector3 xn, Vector3 dir, vector< Vector3 > &points) | BALL::VIEW::AddBackboneModel | [inline, protected] |
| calculateTubePoints_(Vector3 right, Vector3 dir, vector< Vector3 > &points) | BALL::VIEW::AddBackboneModel | [inline, protected] |
| care_for_SS_ | BALL::VIEW::AddBackboneModel | [protected] |
| clear() | BALL::VIEW::AddBackboneModel | [virtual] |
| clear_() | BALL::VIEW::AddBackboneModel | [protected, virtual] |
| clearComposites() | BALL::VIEW::ModelProcessor | [inline, virtual] |
| clearProperty(Property property) | BALL::PropertyManager | |
| clearProperty(const string &name) | BALL::PropertyManager | |
| collectPositions(vector< Residue * > residues) | BALL::VIEW::AddBackboneModel | [protected, virtual] |
| const_argument_pointer typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| const_argument_reference typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| countNamedProperties() const | BALL::PropertyManager | |
| countProperties() const | BALL::PropertyManager | |
| createGeometricObjects() | BALL::VIEW::AddBackboneModel | [virtual] |
| createModel_(Position set_pos, Position model_pos) | BALL::VIEW::AddBackboneModel | [protected, virtual] |
| createRibbon_(Position set_pos, Position model_pos) | BALL::VIEW::AddBackboneModel | [protected, virtual] |
| createTube_(Position set_pos, Position model_pos) | BALL::VIEW::AddBackboneModel | [protected, virtual] |
| destroy() | BALL::PropertyManager | [virtual] |
| drawing_precision_ | BALL::VIEW::ModelProcessor | [protected] |
| dummy_chain_ | BALL::VIEW::AddBackboneModel | [protected] |
| dummy_protein_ | BALL::VIEW::AddBackboneModel | [protected] |
| dummy_ss_ | BALL::VIEW::AddBackboneModel | [protected] |
| dump(std::ostream &s=std::cout, Size depth=0) const | BALL::VIEW::AddBackboneModel | [virtual] |
| evaluateBSpline(const Vector3 &v1, const Vector3 &v2, const Vector3 &v3, float x, Vector3 &result) | BALL::VIEW::AddBackboneModel | [inline, protected] |
| finish() | BALL::UnaryProcessor< Composite > | [inline, virtual] |
| geometric_objects_ | BALL::VIEW::ModelProcessor | [protected] |
| get(PropertyManager &property_manager) const | BALL::PropertyManager | |
| getBitVector() | BALL::PropertyManager | |
| getBitVector() const | BALL::PropertyManager | |
| getDrawingPrecision() const | BALL::VIEW::ModelProcessor | |
| getGeometricObjects() | BALL::VIEW::ModelProcessor | [inline] |
| getGeometricObjects() const | BALL::VIEW::ModelProcessor | [inline] |
| getNamedProperty(Position index) const | BALL::PropertyManager | |
| getNamedProperty(Position index) | BALL::PropertyManager | |
| getProperty(const string &name) const | BALL::PropertyManager | |
| getSurfaceDrawingPrecision() const | BALL::VIEW::ModelProcessor | |
| getTubeRadius() const | BALL::VIEW::AddBackboneModel | [inline] |
| guide_points_ | BALL::VIEW::AddBackboneModel | [protected] |
| hasProperty(Property property) const | BALL::PropertyManager | |
| hasProperty(const string &name) const | BALL::PropertyManager | |
| interpolate_() | BALL::VIEW::AddBackboneModel | [protected, virtual] |
| interpolated_points_ | BALL::VIEW::AddBackboneModel | [protected] |
| interpolation_steps_ | BALL::VIEW::AddBackboneModel | [protected] |
| isValid() const | BALL::VIEW::ModelProcessor | [inline, virtual] |
| last_protein_ | BALL::VIEW::AddBackboneModel | [protected] |
| middle_ribbon_ | BALL::VIEW::AddBackboneModel | [protected] |
| middle_slide_ | BALL::VIEW::AddBackboneModel | [protected] |
| model_parts_ | BALL::VIEW::AddBackboneModel | [protected] |
| ModelProcessor() | BALL::VIEW::ModelProcessor | |
| ModelProcessor(const ModelProcessor &model_processor) | BALL::VIEW::ModelProcessor | |
| ModelTypes enum name | BALL::VIEW::AddBackboneModel | [protected] |
| NUCLEIC_ACID enum value | BALL::VIEW::AddBackboneModel | [protected] |
| number_of_ribbons_ | BALL::VIEW::AddBackboneModel | [protected] |
| offsets_ | BALL::VIEW::AddBackboneModel | [protected] |
| operator BitVector &() | BALL::PropertyManager | |
| operator!=(const PropertyManager &pm) const | BALL::PropertyManager | |
| operator()(Composite &composite) | BALL::VIEW::AddBackboneModel | [virtual] |
| operator=(const PropertyManager &property_manager) | BALL::PropertyManager | |
| operator==(const PropertyManager &pm) const | BALL::PropertyManager | |
| PropertyManager() | BALL::PropertyManager | |
| PropertyManager(const PropertyManager &property_manager) | BALL::PropertyManager | |
| read(PersistenceManager &pm) | BALL::PropertyManager | |
| refineGuidePoints_() | BALL::VIEW::AddBackboneModel | [inline, protected, virtual] |
| refineModelParts_() | BALL::VIEW::AddBackboneModel | [protected, virtual] |
| residues_to_be_rendered_ | BALL::VIEW::AddBackboneModel | [protected] |
| residuesAreConnected_(Residue &residue1, Residue &residue2) | BALL::VIEW::AddBackboneModel | [inline, protected] |
| result_type typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| RIBBON enum value | BALL::VIEW::AddBackboneModel | [protected] |
| ribbon_height_ | BALL::VIEW::AddBackboneModel | [protected] |
| ribbon_mode_ | BALL::VIEW::AddBackboneModel | [protected] |
| ribbon_width_ | BALL::VIEW::AddBackboneModel | [protected] |
| ribbonModeEnabled() const | BALL::VIEW::AddBackboneModel | [inline] |
| set(const PropertyManager &property_manager) | BALL::PropertyManager | |
| setDrawingPrecision(Index precision) | BALL::VIEW::ModelProcessor | |
| setProperty(Property property) | BALL::PropertyManager | |
| setProperty(const NamedProperty &property) | BALL::PropertyManager | |
| setProperty(const string &name) | BALL::PropertyManager | |
| setProperty(const string &name, bool value) | BALL::PropertyManager | |
| setProperty(const string &name, int value) | BALL::PropertyManager | |
| setProperty(const string &name, unsigned int value) | BALL::PropertyManager | |
| setProperty(const string &name, float value) | BALL::PropertyManager | |
| setProperty(const string &name, double value) | BALL::PropertyManager | |
| setProperty(const string &name, const string &value) | BALL::PropertyManager | |
| setProperty(const string &name, const PersistentObject &value) | BALL::PropertyManager | |
| setRibbonMode(bool state) | BALL::VIEW::AddBackboneModel | [inline] |
| setSurfaceDrawingPrecision(float precision) | BALL::VIEW::ModelProcessor | |
| setTubeRadius(float radius) | BALL::VIEW::AddBackboneModel | [inline] |
| slides_ | BALL::VIEW::AddBackboneModel | [protected] |
| slides_angle_ | BALL::VIEW::AddBackboneModel | [protected] |
| ss_ | BALL::VIEW::AddBackboneModel | [protected] |
| start() | BALL::VIEW::AddBackboneModel | [virtual] |
| surface_drawing_precision_ | BALL::VIEW::ModelProcessor | [protected] |
| swap(PropertyManager &property_manager) | BALL::PropertyManager | |
| temp_matrix_ | BALL::VIEW::AddBackboneModel | [protected] |
| toggleProperty(Property property) | BALL::PropertyManager | |
| TUBE enum value | BALL::VIEW::AddBackboneModel | [protected] |
| tube_radius_ | BALL::VIEW::AddBackboneModel | [protected] |
| UnaryProcessor() | BALL::UnaryProcessor< Composite > | [inline] |
| UnaryProcessor(const UnaryProcessor &) | BALL::UnaryProcessor< Composite > | [inline] |
| write(PersistenceManager &pm) const | BALL::PropertyManager | |
| xs_ | BALL::VIEW::AddBackboneModel | [protected] |
| ys_ | BALL::VIEW::AddBackboneModel | [protected] |
| ~AddBackboneModel() | BALL::VIEW::AddBackboneModel | [virtual] |
| ~ModelProcessor() | BALL::VIEW::ModelProcessor | [virtual] |
| ~PropertyManager() | BALL::PropertyManager | [virtual] |
| ~UnaryProcessor() | BALL::UnaryProcessor< Composite > | [inline, virtual] |