BALL::AmberNonBonded Member List
This is the complete list of members for
BALL::AmberNonBonded
, including all inherited members.
algorithm_type_
BALL::AmberNonBonded
[private]
AmberNonBonded
()
BALL::AmberNonBonded
AmberNonBonded
(ForceField &force_field)
BALL::AmberNonBonded
AmberNonBonded
(const AmberNonBonded &amber_non_bonded)
BALL::AmberNonBonded
buildVectorOfNonBondedAtomPairs
(const std::vector< std::pair< Atom *, Atom * > > &atom_vector, const LennardJones &lennard_jones, const Potential1210 &hydrogen_bond)
BALL::AmberNonBonded
[virtual]
clear
()
BALL::AmberNonBonded
[virtual]
cut_off_
BALL::AmberNonBonded
[private]
cut_off_electrostatic_
BALL::AmberNonBonded
[private]
cut_off_vdw_
BALL::AmberNonBonded
[private]
cut_on_electrostatic_
BALL::AmberNonBonded
[private]
cut_on_vdw_
BALL::AmberNonBonded
[private]
determineMethodOfAtomPairGeneration
()
BALL::AmberNonBonded
[virtual]
electrostatic_energy_
BALL::AmberNonBonded
[protected]
energy_
BALL::ForceFieldComponent
[protected]
force_field_
BALL::ForceFieldComponent
[protected]
ForceFieldComponent
()
BALL::ForceFieldComponent
ForceFieldComponent
(ForceField &force_field)
BALL::ForceFieldComponent
ForceFieldComponent
(const ForceFieldComponent &force_field_component)
BALL::ForceFieldComponent
getElectrostaticEnergy
() const
BALL::AmberNonBonded
[virtual]
getEnergy
() const
BALL::ForceFieldComponent
[virtual]
getForceField
() const
BALL::ForceFieldComponent
getName
() const
BALL::ForceFieldComponent
getVdwEnergy
() const
BALL::AmberNonBonded
[virtual]
hydrogen_bond_
BALL::AmberNonBonded
[private]
inverse_distance_off_on_electrostatic_3_
BALL::AmberNonBonded
[private]
inverse_distance_off_on_vdw_3_
BALL::AmberNonBonded
[private]
is_hydrogen_bond_
BALL::AmberNonBonded
[private]
isEnabled
() const
BALL::ForceFieldComponent
[inline]
non_bonded_
BALL::AmberNonBonded
[private]
number_of_1_4_
BALL::AmberNonBonded
[private]
number_of_h_bonds_
BALL::AmberNonBonded
[private]
operator=
(const AmberNonBonded &anb)
BALL::AmberNonBonded
operator==
(const AmberNonBonded &anb)
BALL::AmberNonBonded
scaling_electrostatic_1_4_
BALL::AmberNonBonded
[private]
scaling_vdw_1_4_
BALL::AmberNonBonded
[private]
setEnabled
(bool state)
BALL::ForceFieldComponent
[inline]
setForceField
(ForceField &force_field)
BALL::ForceFieldComponent
setName
(const String &name)
BALL::ForceFieldComponent
setup
()
BALL::AmberNonBonded
[virtual]
update
()
BALL::AmberNonBonded
[virtual]
updateEnergy
()
BALL::AmberNonBonded
[virtual]
updateForces
()
BALL::AmberNonBonded
[virtual]
use_dist_depend_dielectric_
BALL::AmberNonBonded
[private]
van_der_waals_
BALL::AmberNonBonded
[private]
vdw_energy_
BALL::AmberNonBonded
[protected]
~AmberNonBonded
()
BALL::AmberNonBonded
[virtual]
~ForceFieldComponent
()
BALL::ForceFieldComponent
[virtual]