BALL::VanDerWaals Member List
This is the complete list of members for
BALL::VanDerWaals
, including all inherited members.
calculateScore
()
BALL::VanDerWaals
[virtual]
calculateVDWEnergy_
(const AtomVector &atom_vector)
BALL::VanDerWaals
[private]
CALCULATION__FULL_LJ_POTENTIAL
enum value
BALL::VanDerWaals
CALCULATION__SOFTENED_LJ_POTENTIAL_LOG
enum value
BALL::VanDerWaals
CALCULATION__SOFTENED_LJ_POTENTIAL_SIMPLE
enum value
BALL::VanDerWaals
calculation_method_
BALL::VanDerWaals
[private]
CalculationMethod
enum name
BALL::VanDerWaals
clear
()
BALL::VanDerWaals
[virtual]
createNonBondedList_
(const ForceField::PairVector &atom_pair_vector)
BALL::VanDerWaals
[private]
cut_off_vdw_
BALL::VanDerWaals
[private]
cut_on_vdw_
BALL::VanDerWaals
[private]
getName
() const
BALL::ScoringComponent
getScore
() const
BALL::ScoringComponent
[virtual]
getScoringFunction
() const
BALL::ScoringComponent
hydrogen_bond_
BALL::VanDerWaals
[protected]
is_hydrogen_bond_
BALL::VanDerWaals
[protected]
lennard_jones_
BALL::VanDerWaals
[protected]
non_bonded_
BALL::VanDerWaals
[protected]
number_of_1_4_
BALL::VanDerWaals
[protected]
number_of_h_bonds_
BALL::VanDerWaals
[protected]
scaling_vdw_1_4_
BALL::VanDerWaals
[private]
score_
BALL::ScoringComponent
[protected]
scoring_function_
BALL::ScoringComponent
[protected]
ScoringComponent
()
BALL::ScoringComponent
ScoringComponent
(const ScoringComponent &sc)
BALL::ScoringComponent
ScoringComponent
(ScoringFunction &sf)
BALL::ScoringComponent
setName
(const String &name)
BALL::ScoringComponent
setScoringFunction
(ScoringFunction &sf)
BALL::ScoringComponent
setup
()
BALL::VanDerWaals
[virtual]
softening_limit_
BALL::VanDerWaals
[private]
VanDerWaals
()
BALL::VanDerWaals
VanDerWaals
(ScoringFunction &sf)
BALL::VanDerWaals
VanDerWaals
(ScoringComponent &sc)
BALL::VanDerWaals
vdw_ligand_
BALL::VanDerWaals
[private]
vdw_receptor_
BALL::VanDerWaals
[private]
vdw_system_
BALL::VanDerWaals
[private]
verbosity_
BALL::VanDerWaals
[private]
~ScoringComponent
()
BALL::ScoringComponent
[virtual]
~VanDerWaals
()
BALL::VanDerWaals
[virtual]