, including all inherited members.
atom_status_ | BALL::RSComputer | [protected] |
AtomStatus enum name | BALL::RSComputer | |
centerOfProbe(const SortedPosition3 &pos, TVector3< double > &c1, TVector3< double > &c2) | BALL::RSComputer | [private] |
checkProbe(const TSphere3< double > &probe, const SortedPosition3 &pos) | BALL::RSComputer | [private] |
correct(Index atom) | BALL::RSComputer | [private] |
correctProbePosition(Position atom) | BALL::RSComputer | [private] |
correctProbePosition(const SortedPosition3 &pos) | BALL::RSComputer | [private] |
createFreeEdge(RSVertex *vertex1, RSVertex *vertex2) | BALL::RSComputer | [private] |
extendComponent() | BALL::RSComputer | [private] |
faceExists(RSFace *face, const std::list< RSVertex * > &vertices) | BALL::RSComputer | [private] |
findEdge(Position direction, Position extrem) | BALL::RSComputer | [private] |
findFace(Position direction, Position extrem) | BALL::RSComputer | [private] |
findFirstAtom(Position direction, Position extrem) | BALL::RSComputer | [private] |
findFirstEdge() | BALL::RSComputer | [private] |
findFirstFace() | BALL::RSComputer | [private] |
findFirstVertex() | BALL::RSComputer | [private] |
findSecondAtom(Index atom, Position direction, Position extrem) | BALL::RSComputer | [private] |
findThirdAtom(Index atom1, Index atom2, const std::deque< Index > &third, std::deque< std::pair< Index, TSphere3< double > > > &atoms) | BALL::RSComputer | [private] |
getCircleExtremum(const TCircle3< double > &circle, Position direction, Position extrem) | BALL::RSComputer | [private] |
getCircles(Index atom1, Index atom2, TCircle3< double > &circle1, TCircle3< double > &circle2, TCircle3< double > &circle3) | BALL::RSComputer | [private] |
getFaceNormal(const TSphere3< double > &atom1, const TSphere3< double > &atom2, const TSphere3< double > &atom3, const TSphere3< double > &probe) | BALL::RSComputer | [private] |
getRSComponent() | BALL::RSComputer | [private] |
getStartPosition() | BALL::RSComputer | [private] |
insert(RSVertex *vertex) | BALL::RSComputer | [private] |
insert(RSEdge *edge) | BALL::RSComputer | [private] |
insert(RSFace *face) | BALL::RSComputer | [private] |
neighbours_ | BALL::RSComputer | [protected] |
neighbours_of_two_ | BALL::RSComputer | [protected] |
neighboursOfThreeAtoms(Index atom1, Index atom2, Index atom3, std::deque< Index > &output_list) | BALL::RSComputer | [private] |
neighboursOfTwoAtoms(const SortedPosition2 &pos) | BALL::RSComputer | [private] |
new_faces_ | BALL::RSComputer | [protected] |
new_vertices_ | BALL::RSComputer | [protected] |
preProcessing() | BALL::RSComputer | [private] |
probe_positions_ | BALL::RSComputer | [protected] |
ProbeStatus enum name | BALL::RSComputer | |
rs_ | BALL::RSComputer | [protected] |
RSComputer() | BALL::RSComputer | |
RSComputer(ReducedSurface *rs) | BALL::RSComputer | |
run() | BALL::RSComputer | |
STATUS_INSIDE enum value | BALL::RSComputer | |
STATUS_NOT_OK enum value | BALL::RSComputer | |
STATUS_NOT_TESTED enum value | BALL::RSComputer | |
STATUS_OK enum value | BALL::RSComputer | |
STATUS_ON_SURFACE enum value | BALL::RSComputer | |
STATUS_UNKNOWN enum value | BALL::RSComputer | |
thirdAtom(RSVertex *vertex1, RSVertex *vertex2, RSFace *face, TSphere3< double > &probe, TAngle< double > &phi) | BALL::RSComputer | [private] |
treatEdge(RSEdge *edge) | BALL::RSComputer | [private] |
treatFace(RSFace *face) | BALL::RSComputer | [private] |
updateFaceAndEdges(RSVertex *v1, RSVertex *v2, RSVertex *v3, RSEdge *e1, RSEdge *e2, RSEdge *e3, RSFace *f, const TSphere3< double > &probe) | BALL::RSComputer | [private] |
vertices_ | BALL::RSComputer | [protected] |
~RSComputer() | BALL::RSComputer | [virtual] |