acceptor_occupied_ | BALL::HBondShiftProcessor | [private] |
acceptor_types_ | BALL::HBondShiftProcessor | [protected] |
acceptors_ | BALL::HBondShiftProcessor | [protected] |
alpha_proton_oxygen_hydrogen_separation_distance_ | BALL::HBondShiftProcessor | [protected] |
amide_proton_factor_ | BALL::HBondShiftProcessor | [protected] |
amide_proton_oxygen_hydrogen_separation_distance_ | BALL::HBondShiftProcessor | [protected] |
amide_proton_subtrahend_ | BALL::HBondShiftProcessor | [protected] |
amide_protons_are_targets_ | BALL::HBondShiftProcessor | [protected] |
argument_pointer typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
argument_reference typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
argument_type typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
clear() | BALL::ShiftModule | [virtual] |
const_argument_pointer typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
const_argument_reference typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
donor_occupied_ | BALL::HBondShiftProcessor | [private] |
donors_ | BALL::HBondShiftProcessor | [protected] |
exclude_selfinteraction_ | BALL::HBondShiftProcessor | [protected] |
finish() | BALL::HBondShiftProcessor | [virtual] |
getDonor_(Atom *a) | BALL::HBondShiftProcessor | [private] |
getName() const | BALL::ShiftModule | |
getParameters() const | BALL::ShiftModule | |
hbonds_ | BALL::HBondShiftProcessor | [private] |
HBondShiftProcessor() | BALL::HBondShiftProcessor | |
HBondShiftProcessor(const HBondShiftProcessor &processor) | BALL::HBondShiftProcessor | |
init() | BALL::HBondShiftProcessor | [virtual] |
isValid() const | BALL::ShiftModule | |
module_name_ | BALL::ShiftModule | [protected] |
operator()(Composite &composite) | BALL::HBondShiftProcessor | [virtual] |
operator=(const ShiftModule &module) | BALL::ShiftModule | |
parameters_ | BALL::ShiftModule | [protected] |
postprocessing_() | BALL::HBondShiftProcessor | [private] |
printEffectors_() | BALL::HBondShiftProcessor | [private] |
printParameters_() | BALL::HBondShiftProcessor | [private] |
printTargets_() | BALL::HBondShiftProcessor | [private] |
PROPERTY__EXPERIMENTAL__SHIFT | BALL::ShiftModule | [static] |
PROPERTY__HBOND_SHIFT | BALL::HBondShiftProcessor | [static] |
PROPERTY__SHIFT | BALL::ShiftModule | [static] |
result_type typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
setName(const String &name) | BALL::ShiftModule | |
setParameters(Parameters ¶meters) | BALL::ShiftModule | |
ShiftModule() | BALL::ShiftModule | |
ShiftModule(Parameters ¶meters, const String &name="") | BALL::ShiftModule | |
ShiftModule(const ShiftModule &module) | BALL::ShiftModule | |
ShiftXwise_hydrogen_bonds_computation_ | BALL::HBondShiftProcessor | [protected] |
start() | BALL::HBondShiftProcessor | [virtual] |
UnaryProcessor() | BALL::UnaryProcessor< Composite > | [inline] |
UnaryProcessor(const UnaryProcessor &) | BALL::UnaryProcessor< Composite > | [inline] |
valid_ | BALL::ShiftModule | [protected] |
~HBondShiftProcessor() | BALL::HBondShiftProcessor | [virtual] |
~ShiftModule() | BALL::ShiftModule | [virtual] |
~UnaryProcessor() | BALL::UnaryProcessor< Composite > | [inline, virtual] |