, including all inherited members.
all_small_beers_ | BALL::RingPerceptionProcessor | [protected, static] |
all_small_rings_ | BALL::RingPerceptionProcessor | [protected, static] |
argument_pointer typedef | BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
argument_reference typedef | BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
argument_type typedef | BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
atom_to_tnode_ | BALL::RingPerceptionProcessor | [protected, static] |
BalducciPearlmanAlgorithm_(std::vector< std::vector< Atom * > > &sssr, MolecularGraph &graph) | BALL::RingPerceptionProcessor | [protected] |
BalducciPearlmanRingSelector_(BitVector bit_vector) | BALL::RingPerceptionProcessor | [protected, static] |
BCC_ | BALL::RingPerceptionProcessor | [protected] |
bond_to_index_ | BALL::RingPerceptionProcessor | [protected, static] |
calculateSSSR(vector< vector< Atom * > > &sssr, AtomContainer &ac) | BALL::RingPerceptionProcessor | |
checkEdges_(HashSet< Atom * > &ring_set, AtomContainer &ac) | BALL::RingPerceptionProcessor | [protected] |
const_argument_pointer typedef | BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
const_argument_reference typedef | BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
DFSBCC_(std::vector< MolecularGraph * > &bccs, Size dfbi, HashMap< NodeItem< Index, Index > *, Size > DFBIndex, NodeItem< Index, Index > *v) | BALL::RingPerceptionProcessor | [protected] |
FiguerasAlgorithm_(vector< vector< Atom * > > &sssr, AtomContainer &ac) | BALL::RingPerceptionProcessor | [protected] |
findAllBCC(std::vector< MolecularGraph * > &bcc, MolecularGraph &graph) | BALL::RingPerceptionProcessor | |
findAllBCC_(std::vector< MolecularGraph * > &bcc, MolecularGraph &graph) | BALL::RingPerceptionProcessor | [protected] |
finish() | BALL::UnaryProcessor< AtomContainer > | [inline, virtual] |
forwarded_rings_ | BALL::RingPerceptionProcessor | [protected, static] |
getAllSmallRings() const | BALL::RingPerceptionProcessor | |
getRing_(Atom *n, HashSet< Atom * > &ring_set) | BALL::RingPerceptionProcessor | [protected] |
index_to_bond_ | BALL::RingPerceptionProcessor | [protected, static] |
matrix_ | BALL::RingPerceptionProcessor | [protected, static] |
operator()(AtomContainer &ac) | BALL::RingPerceptionProcessor | [virtual] |
operator=(const RingPerceptionProcessor &rp) | BALL::RingPerceptionProcessor | |
options | BALL::RingPerceptionProcessor | |
P_ | BALL::RingPerceptionProcessor | [protected] |
parents_ | BALL::RingPerceptionProcessor | [protected] |
result_type typedef | BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
RingPerceptionProcessor() | BALL::RingPerceptionProcessor | |
RingPerceptionProcessor(const RingPerceptionProcessor &rp) | BALL::RingPerceptionProcessor | |
rings_ | BALL::RingPerceptionProcessor | [protected, static] |
setDefaultOptions() | BALL::RingPerceptionProcessor | |
start() | BALL::UnaryProcessor< AtomContainer > | [inline, virtual] |
tested_beers_ | BALL::RingPerceptionProcessor | [protected, static] |
tnode_to_atom_ | BALL::RingPerceptionProcessor | [protected, static] |
UnaryProcessor() | BALL::UnaryProcessor< AtomContainer > | [inline] |
UnaryProcessor(const UnaryProcessor &) | BALL::UnaryProcessor< AtomContainer > | [inline] |
visited_ | BALL::RingPerceptionProcessor | [protected] |
visited_bonds_ | BALL::RingPerceptionProcessor | [protected] |
~RingPerceptionProcessor() | BALL::RingPerceptionProcessor | [virtual] |
~UnaryProcessor() | BALL::UnaryProcessor< AtomContainer > | [inline, virtual] |