BALL
1.4.2
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BALL
AmberFF
BALL::AmberFF Member List
This is the complete list of members for
BALL::AmberFF
, including all inherited members.
AmberFF
()
BALL::AmberFF
AmberFF
(System &system)
BALL::AmberFF
AmberFF
(System &system, const Options &options)
BALL::AmberFF
AmberFF
(const AmberFF &force_field)
BALL::AmberFF
atoms_
BALL::ForceField
protected
clear
()
BALL::AmberFF
virtual
collectAtoms_
(const System &system)
BALL::ForceField
protected
components_
BALL::ForceField
protected
countComponents
() const
BALL::ForceField
disableSelection
()
BALL::ForceField
enableSelection
()
BALL::ForceField
energy_
BALL::ForceField
protected
error
()
BALL::ForceField
filename_
BALL::AmberFF
protected
ForceField
()
BALL::ForceField
ForceField
(System &system)
BALL::ForceField
ForceField
(System &system, const Options &options)
BALL::ForceField
ForceField
(const ForceField &force_field)
BALL::ForceField
getAtoms
() const
BALL::ForceField
getBendEnergy
() const
BALL::AmberFF
getComponent
(const Size index) const
BALL::ForceField
getComponent
(const String &name) const
BALL::ForceField
getEnergy
() const
BALL::ForceField
getESEnergy
() const
BALL::AmberFF
getMaximumNumberOfErrors
() const
BALL::ForceField
getName
() const
BALL::ForceField
getNonbondedEnergy
() const
BALL::AmberFF
getNumberOfAtoms
() const
BALL::ForceField
getNumberOfMovableAtoms
() const
BALL::ForceField
getParameters
()
BALL::ForceField
getResults
() const
BALL::AmberFF
virtual
getRMSGradient
() const
BALL::ForceField
getSetupTime
() const
BALL::ForceField
getStretchEnergy
() const
BALL::AmberFF
getSystem
()
BALL::ForceField
getSystem
() const
BALL::ForceField
getTorsionEnergy
() const
BALL::AmberFF
getUnassignedAtoms
()
BALL::ForceField
getUpdateFrequency
() const
BALL::AmberFF
virtual
getUpdateTime
() const
BALL::ForceField
getUseSelection
() const
BALL::ForceField
getVdWEnergy
() const
BALL::AmberFF
hasInitializedParameters
() const
BALL::AmberFF
insertComponent
(ForceFieldComponent *force_field_component)
BALL::ForceField
isSelectionEnabled
() const
BALL::ForceField
isValid
() const
BALL::ForceField
max_number_of_errors_
BALL::ForceField
protected
name_
BALL::ForceField
protected
number_of_errors_
BALL::ForceField
protected
number_of_movable_atoms_
BALL::ForceField
protected
operator=
(const AmberFF &force_field)
BALL::AmberFF
BALL::ForceField::operator=
(const ForceField &force_field)
BALL::ForceField
options
BALL::ForceField
PairVector
typedef
BALL::ForceField
parameters_
BALL::ForceField
protected
parameters_initialized_
BALL::AmberFF
protected
performRequiredUpdates_
()
BALL::ForceField
protected
virtual
periodic_boundary
BALL::ForceField
removeComponent
(const ForceFieldComponent *force_field_component)
BALL::ForceField
removeComponent
(const String &name)
BALL::ForceField
selection_enabled_
BALL::ForceField
protected
setMaximumNumberOfErrors
(Size nr)
BALL::ForceField
setName
(const String &name)
BALL::ForceField
setup
(System &system)
BALL::ForceField
setup
(System &system, const Options &options)
BALL::ForceField
setup_time_stamp_
BALL::ForceField
protected
sortSelectedAtomVector_
()
BALL::ForceField
protected
specificSetup
()
BALL::AmberFF
virtual
system_
BALL::ForceField
protected
unassigned_atoms_
BALL::ForceField
protected
update
()
BALL::ForceField
virtual
update_time_stamp_
BALL::ForceField
protected
updateEnergy
()
BALL::ForceField
updateForces
()
BALL::ForceField
use_selection_
BALL::ForceField
protected
valid_
BALL::ForceField
protected
~AmberFF
()
BALL::AmberFF
virtual
~ForceField
()
BALL::ForceField
virtual
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