BALL::AssignBondOrderProcessor Member List

This is the complete list of members for BALL::AssignBondOrderProcessor, including all inherited members.

ac_	BALL::AssignBondOrderProcessor	protected
add_missing_hydrogens_	BALL::AssignBondOrderProcessor	protected
alpha_	BALL::AssignBondOrderProcessor	protected
apply(Position i)	BALL::AssignBondOrderProcessor
apply_(BondOrderAssignment &solution)	BALL::AssignBondOrderProcessor	protected
argument_pointer typedef	BALL::UnaryFunctor< AtomContainer, Processor::Result >
argument_reference typedef	BALL::UnaryFunctor< AtomContainer, Processor::Result >
argument_type typedef	BALL::UnaryFunctor< AtomContainer, Processor::Result >
AssignBondOrderProcessor()	BALL::AssignBondOrderProcessor
AssignBondOrderProcessor(const AssignBondOrderProcessor &abop)	BALL::AssignBondOrderProcessor	protected
AStarBondOrderStrategy class	BALL::AssignBondOrderProcessor	friend
atom_to_block_	BALL::AssignBondOrderProcessor	protected
atom_to_virtual_bond_index_	BALL::AssignBondOrderProcessor	protected
atom_type_normalization_factor_	BALL::AssignBondOrderProcessor	protected
block_definition_	BALL::AssignBondOrderProcessor	protected
block_to_length_	BALL::AssignBondOrderProcessor	protected
block_to_start_idx_	BALL::AssignBondOrderProcessor	protected
block_to_start_valence_	BALL::AssignBondOrderProcessor	protected
bond_fixed_	BALL::AssignBondOrderProcessor	protected
bond_length_normalization_factor_	BALL::AssignBondOrderProcessor	protected
bond_lengths_penalties_	BALL::AssignBondOrderProcessor	protected
bond_to_index_	BALL::AssignBondOrderProcessor	protected
BondOrderAssignment class	BALL::AssignBondOrderProcessor	friend
BondOrderAssignmentStrategy class	BALL::AssignBondOrderProcessor	friend
BranchAndBoundBondOrderStrategy class	BALL::AssignBondOrderProcessor	friend
clear()	BALL::AssignBondOrderProcessor
compute_also_connectivity_	BALL::AssignBondOrderProcessor	protected
compute_also_non_optimal_solutions_	BALL::AssignBondOrderProcessor	protected
computeNextSolution(bool apply_solution=true)	BALL::AssignBondOrderProcessor
computeVirtualHydrogens_(Atom *atom)	BALL::AssignBondOrderProcessor	protected
const_argument_pointer typedef	BALL::UnaryFunctor< AtomContainer, Processor::Result >
const_argument_reference typedef	BALL::UnaryFunctor< AtomContainer, Processor::Result >
evaluatePenalty(AtomContainer *ac)	BALL::AssignBondOrderProcessor
evaluation_mode_	BALL::AssignBondOrderProcessor	protected
finish()	BALL::AssignBondOrderProcessor	virtual
fixed_val_	BALL::AssignBondOrderProcessor	protected
FPTBondOrderStrategy class	BALL::AssignBondOrderProcessor	friend
free_bonds_	BALL::AssignBondOrderProcessor	protected
getAtomContainer()	BALL::AssignBondOrderProcessor	inline
getAtomContainer() const	BALL::AssignBondOrderProcessor	inline
getNumberOfAddedHydrogens(Position i)	BALL::AssignBondOrderProcessor	inline
getNumberOfComputedSolutions()	BALL::AssignBondOrderProcessor	inline
getNumberOfNodeExpansions(Position i)	BALL::AssignBondOrderProcessor	inline
getNumberOfNodeExpansions_(const BondOrderAssignment &sol)	BALL::AssignBondOrderProcessor	inlineprotected
getPenaltyClass_(Atom *atom)	BALL::AssignBondOrderProcessor	protected
getQueueSize(Position i)	BALL::AssignBondOrderProcessor	inline
getQueueSize_(const BondOrderAssignment &sol)	BALL::AssignBondOrderProcessor	inlineprotected
getSolution(Position i)	BALL::AssignBondOrderProcessor
getTotalCharge(Position i)	BALL::AssignBondOrderProcessor	inline
getTotalCharge_(const BondOrderAssignment &sol)	BALL::AssignBondOrderProcessor	inlineprotected
getTotalPenalty(Position i=0)	BALL::AssignBondOrderProcessor	inline
getTotalPenalty_(const BondOrderAssignment &sol)	BALL::AssignBondOrderProcessor	inlineprotected
hasValidOptions()	BALL::AssignBondOrderProcessor	inline
ILPBondOrderStrategy class	BALL::AssignBondOrderProcessor	friend
index_to_bond_	BALL::AssignBondOrderProcessor	protected
KGreedyBondOrderStrategy class	BALL::AssignBondOrderProcessor	friend
last_applied_solution_	BALL::AssignBondOrderProcessor	protected
max_bond_order_	BALL::AssignBondOrderProcessor	protected
max_number_of_solutions_	BALL::AssignBondOrderProcessor	protected
max_penalty_	BALL::AssignBondOrderProcessor	protected
num_of_free_bonds_	BALL::AssignBondOrderProcessor	protected
num_of_virtual_bonds_	BALL::AssignBondOrderProcessor	protected
number_of_virtual_hydrogens_	BALL::AssignBondOrderProcessor	protected
operator()(AtomContainer &ac)	BALL::AssignBondOrderProcessor	virtual
operator=(const AssignBondOrderProcessor &abop)	BALL::AssignBondOrderProcessor	protected
options	BALL::AssignBondOrderProcessor
PartialBondOrderAssignment class	BALL::AssignBondOrderProcessor	friend
penalties_	BALL::AssignBondOrderProcessor	protected
PQ_Entry_ class	BALL::AssignBondOrderProcessor	friend
preassignPenaltyClasses_()	BALL::AssignBondOrderProcessor	protected
precomputeBondLengthPenalties_()	BALL::AssignBondOrderProcessor	protected
readAtomPenalties_()	BALL::AssignBondOrderProcessor	protected
readOptions_()	BALL::AssignBondOrderProcessor	protected
resetBondOrders()	BALL::AssignBondOrderProcessor
result_type typedef	BALL::UnaryFunctor< AtomContainer, Processor::Result >
setDefaultOptions()	BALL::AssignBondOrderProcessor
solutions_	BALL::AssignBondOrderProcessor	protected
start()	BALL::AssignBondOrderProcessor	virtual
starting_configuration_	BALL::AssignBondOrderProcessor	protected
storeOriginalConfiguration_()	BALL::AssignBondOrderProcessor	protected
strategies_	BALL::AssignBondOrderProcessor	protected
timer_	BALL::AssignBondOrderProcessor	protected
total_num_of_bonds_	BALL::AssignBondOrderProcessor	protected
UnaryProcessor()	BALL::UnaryProcessor< AtomContainer >	inline
UnaryProcessor(const UnaryProcessor &)	BALL::UnaryProcessor< AtomContainer >	inline
use_fine_penalty_	BALL::AssignBondOrderProcessor	protected
valid_	BALL::AssignBondOrderProcessor	protected
virtual_bond_	BALL::AssignBondOrderProcessor	protected
virtual_bond_index_to_atom_	BALL::AssignBondOrderProcessor	protected
virtual_bond_index_to_number_of_virtual_hydrogens_	BALL::AssignBondOrderProcessor	protected
~AssignBondOrderProcessor()	BALL::AssignBondOrderProcessor	virtual
~UnaryProcessor()	BALL::UnaryProcessor< AtomContainer >	inlinevirtual