CVTermList.h

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// $Maintainer: Mathias Walzer $
// $Authors: Andreas Bertsch, Mathias Walzer $
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#pragma once

#include <OpenMS/METADATA/CVTerm.h>
#include <OpenMS/METADATA/MetaInfoInterface.h>
#include <map>

namespace OpenMS
{
  class OPENMS_DLLAPI CVTermList :
    public MetaInfoInterface
  {
public:

    CVTermList() = default;

    CVTermList(const CVTermList&) = default;

    // note: we implement the move constructor ourselves due to a bug in MSVS
    // 2015/2017 which cannot produce a default move constructor for classes
    // that contain STL containers (other than vector).

    CVTermList(CVTermList&&) noexcept;

    virtual ~CVTermList();

    CVTermList& operator=(const CVTermList& rhs) & = default;

    CVTermList& operator=(CVTermList&&) & = default;

    void setCVTerms(const std::vector<CVTerm>& terms);

    void replaceCVTerm(const CVTerm& cv_term);

    void replaceCVTerms(const std::vector<CVTerm>& cv_terms, const String& accession);

    void replaceCVTerms(const std::map<String, std::vector<CVTerm> >& cv_term_map);

    void consumeCVTerms(const std::map<String, std::vector<CVTerm> >& cv_term_map);

    const std::map<String, std::vector<CVTerm> >& getCVTerms() const;

    void addCVTerm(const CVTerm& term);

    //bool checkCVTerms(const ControlledVocabulary& cv) const;

    //void correctCVTermNames();

    bool operator==(const CVTermList& cv_term_list) const;

    bool operator!=(const CVTermList& cv_term_list) const;

    bool hasCVTerm(const String& accession) const;

    //bool checkCVTerms(const CVMappingRule & rule, const ControlledVocabulary & cv) const;

    bool empty() const;
    //}

protected:

  std::map<String, std::vector<CVTerm> > cv_terms_;

  };

} // namespace OpenMS