RTAlignment.h

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2022.
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// $Maintainer: Chris Bielow $
// $Authors: Juliane Schmachtenberg, Chris Bielow $
// --------------------------------------------------------------------------

#pragma once

#include <OpenMS/QC/QCBase.h>

namespace OpenMS
{
  class FeatureMap;
  class PeptideIdentification;
  class TransformationDescription;

  class OPENMS_DLLAPI RTAlignment : public QCBase
  {
    public:
    RTAlignment() = default;
    
    virtual ~RTAlignment() = default;

    void compute(FeatureMap& fm, const TransformationDescription& trafo) const;
    
    void compute(std::vector<PeptideIdentification>& ids, const TransformationDescription& trafo) const;

    const String& getName() const override;
    
    Status requires() const override;
    
  private:
    const String name_ = "RTAlignment";
  };
}