PeakGroup Member List

This is the complete list of members for PeakGroup, including all inherited members.

avg_ppm_error_	PeakGroup	private
begin() const noexcept	PeakGroup
begin() noexcept	PeakGroup
charge_score_	PeakGroup	private
clear()	PeakGroup
decoy_index_	PeakGroup	private
empty() const	PeakGroup
end() const noexcept	PeakGroup
end() noexcept	PeakGroup
getAbsChargeRange() const	PeakGroup
getAvgPPMError() const	PeakGroup
getChargeIntensity(const int abs_charge) const	PeakGroup
getChargeIsotopeCosine(const int abs_charge) const	PeakGroup
getChargeScore() const	PeakGroup
getChargeSNR(const int abs_charge) const	PeakGroup
getDecoyIndex() const	PeakGroup
getIntensity() const	PeakGroup
getIsotopeCosine() const	PeakGroup
getIsotopeDaDistance() const	PeakGroup
getIsotopeIntensities() const	PeakGroup
getMaxQScoreMzRange() const	PeakGroup
getMonoMass() const	PeakGroup
getMzRange(int abs_charge) const	PeakGroup
getQScore() const	PeakGroup
getQvalue() const	PeakGroup
getQvalueWithChargeDecoyOnly() const	PeakGroup
getQvalueWithIsotopeDecoyOnly() const	PeakGroup
getQvalueWithNoiseDecoyOnly() const	PeakGroup
getRepAbsCharge() const	PeakGroup
getScanNumber() const	PeakGroup
getSecondBestMonoMass() const	PeakGroup
getSNR() const	PeakGroup
intensity_	PeakGroup	private
is_positive_	PeakGroup	private
is_targeted_	PeakGroup	private
iso_da_distance_	PeakGroup	private
isotope_cosine_score_	PeakGroup	private
isPositive() const	PeakGroup
isSignalMZ(const double mz, const double tol) const	PeakGroup
isTargeted() const	PeakGroup
LogMzPeak typedef	PeakGroup	private
logMzpeaks_	PeakGroup	private
max_abs_charge_	PeakGroup	private
max_qscore_abs_charge_	PeakGroup	private
max_qscore_mz_end_	PeakGroup	private
max_qscore_mz_start_	PeakGroup	private
min_abs_charge_	PeakGroup	private
monoisotopic_mass_	PeakGroup	private
noisy_peaks	PeakGroup
operator<(const PeakGroup &a) const	PeakGroup
operator=(const PeakGroup &t)=default	PeakGroup
operator==(const PeakGroup &a) const	PeakGroup
operator>(const PeakGroup &a) const	PeakGroup
operator[](const Size i) const	PeakGroup
PeakGroup()=default	PeakGroup
PeakGroup(const int min_abs_charge, const int max_abs_charge, const bool is_positive)	PeakGroup	explicit
PeakGroup(const PeakGroup &)=default	PeakGroup
PeakGroup(PeakGroup &&other)=default	PeakGroup
per_charge_cos_	PeakGroup	private
per_charge_int_	PeakGroup	private
per_charge_pwr_	PeakGroup	private
per_charge_signal_pwr_	PeakGroup	private
per_charge_snr_	PeakGroup	private
per_isotope_int_	PeakGroup	private
PrecalculatedAveragine typedef	PeakGroup	private
push_back(const FLASHDeconvHelperStructs::LogMzPeak &pg)	PeakGroup
qscore_	PeakGroup	private
qvalue_	PeakGroup	private
qvalue_with_charge_decoy_only_	PeakGroup	private
qvalue_with_isotope_decoy_only_	PeakGroup	private
qvalue_with_noise_decoy_only_	PeakGroup	private
recruitAllPeaksInSpectrum(const MSSpectrum &spec, const double tol, const FLASHDeconvHelperStructs::PrecalculatedAveragine &avg, double mono_mass, bool write_detail)	PeakGroup
reserve(Size n)	PeakGroup
scan_number_	PeakGroup	private
second_best_monomass_	PeakGroup	private
setAbsChargeRange(const int min_abs_charge, const int max_abs_charge)	PeakGroup
setAvgPPMError(const float error)	PeakGroup
setChargeIsotopeCosine(const int abs_charge, const float cos)	PeakGroup
setChargePowers_(const int abs_charge, const double signal_pwr, const double noise_pwr, const double intensity)	PeakGroup	private
setChargeScore(const float charge_score)	PeakGroup
setChargeSNR(const int abs_charge, const float c_snr)	PeakGroup
setDecoyIndex(int index)	PeakGroup
setIsotopeCosine(const float cos)	PeakGroup
setIsotopeDaDistance(const double d)	PeakGroup
setMaxQScoreMzRange(const double min, const double max)	PeakGroup
setQScore(const float qscore)	PeakGroup
setQvalue(const float q)	PeakGroup
setQvalueWithChargeDecoyOnly(const float q)	PeakGroup
setQvalueWithIsotopeDecoyOnly(const float q)	PeakGroup
setQvalueWithNoiseDecoyOnly(const float q)	PeakGroup
setRepAbsCharge(const int max_qscore_charge)	PeakGroup
setScanNumber(const int scan_number)	PeakGroup
setSecondBestMonsMass(const double mass)	PeakGroup
setSNR(const float snr)	PeakGroup
setTargeted()	PeakGroup
shrink_to_fit()	PeakGroup
size() const noexcept	PeakGroup
snr_	PeakGroup	private
sort()	PeakGroup
swap(std::vector< FLASHDeconvHelperStructs::LogMzPeak > &x)	PeakGroup
updateAvgPPMError_(double iso_da_distance)	PeakGroup	private
updateChargeFitScoreAndChargeIntensities_()	PeakGroup	private
updateIsotopeCosineAndQScore(const FLASHDeconvHelperStructs::PrecalculatedAveragine &avg, double min_cos, double iso_da_distance)	PeakGroup
updateMonomassAndIsotopeIntensities()	PeakGroup
updateSNR()	PeakGroup
~PeakGroup()	PeakGroup