OpenMS
FLASHDeconvSpectrumFile Member List

This is the complete list of members for FLASHDeconvSpectrumFile, including all inherited members.

topFD_max_peak_count_FLASHDeconvSpectrumFileprivatestatic
topFD_min_peak_count_FLASHDeconvSpectrumFileprivatestatic
writeDeconvolvedMasses(DeconvolvedSpectrum &dspec, std::fstream &fs, const String &file_name, const FLASHDeconvHelperStructs::PrecalculatedAveragine &avg, double tol, bool write_detail, bool record_decoy)FLASHDeconvSpectrumFilestatic
writeDeconvolvedMassesHeader(std::fstream &fs, uint ms_level, bool detail, bool report_decoy)FLASHDeconvSpectrumFilestatic
writeDLMatrix(std::vector< DeconvolvedSpectrum > &dspecs, double tol, std::fstream &fs, const FLASHDeconvHelperStructs::PrecalculatedAveragine &avg)FLASHDeconvSpectrumFilestatic
writeDLMatrixHeader(std::fstream &fs)FLASHDeconvSpectrumFilestatic
writeIsobaricQuantification(std::fstream &fs, std::vector< DeconvolvedSpectrum > &deconvolved_spectra)FLASHDeconvSpectrumFilestatic
writeMzML(const MSExperiment &map, std::vector< DeconvolvedSpectrum > &deconvolved_spectra, const String &deconvolved_mzML_file, const String &annotated_mzML_file, int mzml_charge, DoubleList tols)FLASHDeconvSpectrumFilestatic
writeTopFD(DeconvolvedSpectrum &dspec, std::fstream &fs, const String &filename, const double snr_threshold=1.0, const double qval_threshold=1.0, const uint min_ms_level=1, bool randomize_precursor_mass=false, bool randomize_fragment_mass=false)FLASHDeconvSpectrumFilestatic
writeTopFDHeader(std::fstream &fs, const Param &param)FLASHDeconvSpectrumFilestatic