IndexedMzMLFileLoader.h

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//                   OpenMS -- Open-Source Mass Spectrometry               
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// $Maintainer: Hannes Roest $
// $Authors: Hannes Roest $
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#pragma once

#include <OpenMS/KERNEL/StandardTypes.h>
#include <OpenMS/FORMAT/OPTIONS/PeakFileOptions.h>

namespace OpenMS
{
  class OnDiscMSExperiment;
  typedef OpenMS::OnDiscMSExperiment OnDiscPeakMap;

  class OPENMS_DLLAPI IndexedMzMLFileLoader
  {
    public:

    IndexedMzMLFileLoader();

    ~IndexedMzMLFileLoader();

    PeakFileOptions& getOptions();

    const PeakFileOptions& getOptions() const;

    void setOptions(const PeakFileOptions &);

    bool load(const String& filename, OnDiscPeakMap& exp);

    void store(const String& filename, OnDiscPeakMap& exp);

    void store(const String& filename, PeakMap& exp);

private:

    PeakFileOptions options_;

  };
}