alpha | MessagePasserFactory< Label > | private |
beta | MessagePasserFactory< Label > | private |
createBFPeptideProbabilisticAdderFactor(const std::set< Label > &parentProteinIDs, Label nId, const std::vector< TableDependency< Label > > &deps) | MessagePasserFactory< Label > | |
createPeptideEvidenceFactor(Label id, double prob) | MessagePasserFactory< Label > | |
createPeptideProbabilisticAdderFactor(const std::set< Label > &parentProteinIDs, Label nId) | MessagePasserFactory< Label > | |
createPeptideProbabilisticAdderFactor(const std::vector< Label > &parentProteinIDs, Label nId) | MessagePasserFactory< Label > | |
createProteinFactor(Label id, int nrMissingPeps=0) | MessagePasserFactory< Label > | |
createProteinFactor(Label id, double prior, int nrMissingPeps=0) | MessagePasserFactory< Label > | |
createSumEvidenceFactor(size_t nrParents, Label nId, Label pepId) | MessagePasserFactory< Label > | |
createSumFactor(size_t nrParents, Label nId) | MessagePasserFactory< Label > | |
fillVectorsOfMessagePassers(const std::vector< Label > &protIDs, const std::vector< std::vector< Label >> &parentsOfPeps, const std::vector< double > &pepEvidences, InferenceGraphBuilder< Label > &igb) | MessagePasserFactory< Label > | |
gamma | MessagePasserFactory< Label > | private |
MessagePasserFactory(double alpha, double beta, double gamma, double p) | MessagePasserFactory< Label > | |
minInputsPAF | MessagePasserFactory< Label > | private |
notConditionalGivenSum(unsigned long summ) | MessagePasserFactory< Label > | inlineprivate |
offset | MessagePasserFactory< Label > | private |
p | MessagePasserFactory< Label > | private |