OpenMS  2.4.0
BayesianProteinInferenceAlgorithm Member List

This is the complete list of members for BayesianProteinInferenceAlgorithm, including all inherited members.

BayesianProteinInferenceAlgorithm()BayesianProteinInferenceAlgorithm
check_defaults_DefaultParamHandlerprotected
CMD enum valueProgressLogger
current_logger_ProgressLoggermutableprotected
debug_times_BayesianProteinInferenceAlgorithmprivate
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
endProgress() constProgressLogger
error_name_DefaultParamHandlerprotected
getDefaults() constDefaultParamHandler
getLogType() constProgressLogger
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getSubsections() constDefaultParamHandler
gridBayesianProteinInferenceAlgorithmprivate
GUI enum valueProgressLogger
inferPosteriorProbabilities(std::vector< ProteinIdentification > &proteinIDs, std::vector< PeptideIdentification > &peptideIDs)BayesianProteinInferenceAlgorithm
inferPosteriorProbabilities(const StringList &idXMLs, const String db, const ExperimentalDesign &expDesign, ProteinIdentification &proteinIDs, std::vector< PeptideIdentification > &peptideIDs)BayesianProteinInferenceAlgorithm
inferPosteriorProbabilities(std::vector< PeptideIdentification > pepIdReplicates, ProteinIdentification &proteinIds, const String &db)BayesianProteinInferenceAlgorithm
last_invoke_ProgressLoggermutableprotected
LogType enum nameProgressLogger
logTypeToFactoryName_(LogType type)ProgressLoggerprotectedstatic
nextProgress() constProgressLogger
NONE enum valueProgressLogger
OpenMS::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other)ProgressLogger
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
ProgressLogger()ProgressLogger
ProgressLogger(const ProgressLogger &other)ProgressLogger
recursion_depth_ProgressLoggerprotectedstatic
setLogType(LogType type) constProgressLogger
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setProgress(SignedSize value) constProgressLogger
startProgress(SignedSize begin, SignedSize end, const String &label) constProgressLogger
subsections_DefaultParamHandlerprotected
type_ProgressLoggermutableprotected
updateMembers_()DefaultParamHandlerprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
~BayesianProteinInferenceAlgorithm() override=defaultBayesianProteinInferenceAlgorithm
~DefaultParamHandler()DefaultParamHandlervirtual
~ProgressLogger()ProgressLogger
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