OpenMS
2.4.0
OpenMS
IDMergerAlgorithm
IDMergerAlgorithm Member List
This is the complete list of members for
IDMergerAlgorithm
, including all inherited members.
check_defaults_
DefaultParamHandler
protected
checkOldRunConsistency_
(const std::vector< ProteinIdentification > &protRuns, const String &experiment_type) const
IDMergerAlgorithm
private
checkOldRunConsistency_
(const std::vector< ProteinIdentification > &protRuns, const ProteinIdentification &ref, const String &experiment_type) const
IDMergerAlgorithm
private
CMD
enum value
ProgressLogger
copySearchParams_
(ProteinIdentification &from, ProteinIdentification &to)
IDMergerAlgorithm
private
current_logger_
ProgressLogger
mutable
protected
DefaultParamHandler
(const String &name)
DefaultParamHandler
DefaultParamHandler
(const DefaultParamHandler &rhs)
DefaultParamHandler
defaults_
DefaultParamHandler
protected
defaultsToParam_
()
DefaultParamHandler
protected
endProgress
() const
ProgressLogger
error_name_
DefaultParamHandler
protected
fileOriginToIdx
IDMergerAlgorithm
private
filled
IDMergerAlgorithm
private
getDefaults
() const
DefaultParamHandler
getLogType
() const
ProgressLogger
getName
() const
DefaultParamHandler
getNewIdentifier_
() const
IDMergerAlgorithm
private
getParameters
() const
DefaultParamHandler
getSubsections
() const
DefaultParamHandler
GUI
enum value
ProgressLogger
id
IDMergerAlgorithm
private
IDMergerAlgorithm
(const String &runIdentifier="merged")
IDMergerAlgorithm
explicit
insertRun
(std::vector< ProteinIdentification > &prots, std::vector< PeptideIdentification > &peps)
IDMergerAlgorithm
last_invoke_
ProgressLogger
mutable
protected
LogType
enum name
ProgressLogger
logTypeToFactoryName_
(LogType type)
ProgressLogger
protected
static
movePepIDsAndRefProteinsToResult_
(std::vector< PeptideIdentification > &pepIDs, std::vector< ProteinIdentification > &oldProtRuns)
IDMergerAlgorithm
private
nextProgress
() const
ProgressLogger
NONE
enum value
ProgressLogger
OpenMS::operator=
(const DefaultParamHandler &rhs)
DefaultParamHandler
virtual
OpenMS::ProgressLogger::operator=
(const ProgressLogger &other)
ProgressLogger
operator==
(const DefaultParamHandler &rhs) const
DefaultParamHandler
virtual
param_
DefaultParamHandler
protected
pepResult
IDMergerAlgorithm
private
ProgressLogger
()
ProgressLogger
ProgressLogger
(const ProgressLogger &other)
ProgressLogger
proteinsCollected
IDMergerAlgorithm
private
protResult
IDMergerAlgorithm
private
recursion_depth_
ProgressLogger
protected
static
returnResultsAndClear
(ProteinIdentification &prots, std::vector< PeptideIdentification > &peps)
IDMergerAlgorithm
setLogType
(LogType type) const
ProgressLogger
setName
(const String &name)
DefaultParamHandler
setParameters
(const Param ¶m)
DefaultParamHandler
setProgress
(SignedSize value) const
ProgressLogger
startProgress
(SignedSize begin, SignedSize end, const String &label) const
ProgressLogger
subsections_
DefaultParamHandler
protected
type_
ProgressLogger
mutable
protected
updateMembers_
()
DefaultParamHandler
protected
virtual
warn_empty_defaults_
DefaultParamHandler
protected
~DefaultParamHandler
()
DefaultParamHandler
virtual
~ProgressLogger
()
ProgressLogger
Generated on Fri Jan 18 2019 21:37:54 for OpenMS by
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