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OpenMS
2.4.0
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This is the complete list of members for MzTab, including all inherited members.
addMetaInfoToOptionalColumns(const std::set< String > &keys, std::vector< MzTabOptionalColumnEntry > &opt, const String id, const MetaInfoInterface meta) | MzTab | static |
addPepEvidenceToRows(const std::vector< PeptideEvidence > &peptide_evidences, MzTabPSMSectionRow &row, MzTabPSMSectionRows &rows) | MzTab | static |
comment_rows_ | MzTab | protected |
empty_rows_ | MzTab | protected |
exportConsensusMapToMzTab(const ConsensusMap &consensus_map, const String &filename, const bool export_unidentified_features, const bool export_unassigned_ids, String title="ConsensusMap export from OpenMS") | MzTab | static |
exportFeatureMapToMzTab(const FeatureMap &feature_map, const String &filename) | MzTab | static |
exportIdentificationsToMzTab(const std::vector< ProteinIdentification > &prot_ids, const std::vector< PeptideIdentification > &peptide_ids, const String &filename) | MzTab | static |
extractModificationListFromAASequence(const AASequence &aas, const std::vector< String > &fixed_mods=std::vector< String >()) | MzTab | static |
generateMzTabStringFromFixedModifications(const std::vector< String > &mods) | MzTab | static |
generateMzTabStringFromModifications(const std::vector< String > &mods) | MzTab | static |
generateMzTabStringFromVariableModifications(const std::vector< String > &mods) | MzTab | static |
getCommentRows() const | MzTab | |
getEmptyRows() const | MzTab | |
getMetaData() const | MzTab | |
getPeptideOptionalColumnNames() const | MzTab | |
getPeptideSectionRows() const | MzTab | |
getProteinOptionalColumnNames() const | MzTab | |
getProteinSectionRows() const | MzTab | |
getPSMOptionalColumnNames() const | MzTab | |
getPSMSectionRows() const | MzTab | |
getSmallMoleculeOptionalColumnNames() const | MzTab | |
getSmallMoleculeSectionRows() const | MzTab | |
meta_data_ | MzTab | protected |
MzTab() | MzTab | |
peptide_data_ | MzTab | protected |
protein_data_ | MzTab | protected |
psm_data_ | MzTab | protected |
setCommentRows(const std::map< Size, String > &com) | MzTab | |
setEmptyRows(const std::vector< Size > &empty) | MzTab | |
setMetaData(const MzTabMetaData &md) | MzTab | |
setPeptideSectionRows(const MzTabPeptideSectionRows &psd) | MzTab | |
setProteinSectionRows(const MzTabProteinSectionRows &psd) | MzTab | |
setPSMSectionRows(const MzTabPSMSectionRows &psd) | MzTab | |
setSmallMoleculeSectionRows(const MzTabSmallMoleculeSectionRows &smsd) | MzTab | |
small_molecule_data_ | MzTab | protected |
~MzTab() | MzTab | virtual |