Class Members - Functions

- m -

main() : TOPPBase
main_() : TOPPBase , RNPxlSearch , SimpleSearchEngine , TOPPMetaProSIP , TOPPOpenPepXL , TOPPOpenPepXLLF , TOPPRNPxl
mainWindowNeedsUpdate() : TOPPASScene
makeAxes() : Spectrum3DOpenGLCanvas
makeAxesTicks() : Spectrum3DOpenGLCanvas
makeConsensusFeature_() : QTClusterFinder
makeDataAsStick() : Spectrum3DOpenGLCanvas
makeDataAsTopView() : Spectrum3DOpenGLCanvas
makeGridLines() : Spectrum3DOpenGLCanvas
makeGround() : Spectrum3DOpenGLCanvas
makePrecursorSelectionForKnownLCMSMap() : OfflinePrecursorIonSelection
makeScanMap_() : PepXMLFile
makeStream() : CompressedInputSource
makeTempDirectory_() : TOPPBase
manhattanDist_() : ConfidenceScoring
map2csv() : QcMLFile
map_() : PeakIntensityPredictor
MapAlignmentAlgorithmIdentification() : MapAlignmentAlgorithmIdentification
MapAlignmentAlgorithmKD() : MapAlignmentAlgorithmKD
MapAlignmentAlgorithmPoseClustering() : MapAlignmentAlgorithmPoseClustering
MapAlignmentAlgorithmSpectrumAlignment() : MapAlignmentAlgorithmSpectrumAlignment
MapAlignmentEvaluationAlgorithm() : MapAlignmentEvaluationAlgorithm
MapAlignmentEvaluationAlgorithmPrecision() : MapAlignmentEvaluationAlgorithmPrecision
MapAlignmentEvaluationAlgorithmRecall() : MapAlignmentEvaluationAlgorithmRecall
mapExperimentToTransitionList() : MRMFeatureFinderScoring
mapFiles2Design_() : QuantitativeExperimentalDesign
mapIndex() : KDTreeFeatureMaps
mapPrecursorsToIdentifications() : IDMapper
mapSearchEngineScoreToCvParam_() : MzTabFile
mapSearchEngineToCvParam_() : MzTabFile
mapSeeds2Features() : IsotopeWaveletTransform< PeakType >
margin() : AxisWidget
MarkerMower() : MarkerMower
markUnreachable() : TOPPASMergerVertex , TOPPASSplitterVertex , TOPPASVertex
marr_() : ContinuousWaveletTransformNumIntegration
MascotGenericFile() : MascotGenericFile
MascotInfile() : MascotInfile
MascotRemoteQuery() : MascotRemoteQuery
MascotXMLFile() : MascotXMLFile
MascotXMLHandler() : MascotXMLHandler
MassAnalyzer() : MassAnalyzer
MassAnalyzerVisualizer() : MassAnalyzerVisualizer
massCorrectionTerm() : PScore
MassDecomposition() : MassDecomposition
MassDecompositionAlgorithm() : MassDecompositionAlgorithm
MassExplainer() : MassExplainer
MassTrace() : MassTrace
MassTraceDetection() : MassTraceDetection
MassTraces() : FeatureFinderAlgorithmPickedHelperStructs::MassTraces
matchedCurrentChain() : XQuestScores
matchMasses_() : TOFCalibration
matchModification_() : PepXMLFile , PepXMLFileMascot , ProtXMLFile
matchOddsScore() : XQuestScores
Matrix() : Matrix< Value >
max_size() : KDTree< __K, _Val, _Acc, _Dist, _Cmp, _Alloc > , ConstRefVector< ContainerT >
maxBound() : Histogram< ValueType, BinSizeType >
maxLength() : TOPPASLogWindow
MaxLikeliFitter1D() : MaxLikeliFitter1D
maxPosition() : DIntervalBase< D >
maxPositive() : DPosition< D, TCoordinateType >
maxValue() : Histogram< ValueType, BinSizeType >
maxX() : DIntervalBase< D >
maxY() : DIntervalBase< D >
mean() : BasicStatistics< RealT > , mean_and_stddev
mean_and_stddev() : mean_and_stddev
median() : CalibrationData
MemUsage() : SysInfo::MemUsage
merge() : Param , QcMLFile
mergeAllChannelFeatures_() : SILACLabeler
mergeAnnotatedSpectra() : OPXLSpectrumProcessingAlgorithms
mergeConsensusMaps_() : QuantitativeExperimentalDesign
mergeFailed() : TOPPASMergerVertex
mergeFeatureMaps_() : QuantitativeExperimentalDesign
mergeFeatures() : IsotopeWaveletTransform< PeakType > , MS1FeatureMerger
mergeFeatures_() : ICPLLabeler , ITRAQLabeler , O18Labeler , SILACLabeler
mergeIDFiles_() : QuantitativeExperimentalDesign
mergeIntoLayer() : Spectrum2DCanvas
mergeMS2Fragments() : ClusteredMS2ConsensusSpectrum
mergeMULTISEPeptideIds() : PercolatorFeatureSetHelper
mergeMULTISEProteinIds() : PercolatorFeatureSetHelper
mergeOverlappingWindows_() : InclusionExclusionList
mergePartitions() : SVMWrapper
mergeProteinAccessions_() : BaseLabeler
mergeProteinIdentificationsMaps_() : BaseLabeler
mergeSpectra() : TOPPMetaProSIP
mergeSpectra_() : SpectraMerger
mergeSpectraBlockWise() : SpectraMerger
mergeSpectraPrecursors() : SpectraMerger
mergeVeto_() : GridBasedClustering< Metric >
messageReady() : TOPPASScene
MetaboliteFeatureDeconvolution() : MetaboliteFeatureDeconvolution
MetaboliteSpectralMatching() : MetaboliteSpectralMatching
MetaDataBrowser() : MetaDataBrowser
metadataFileDialog() : TOPPViewBase
MetaInfo() : MetaInfo
MetaInfoDescription() : MetaInfoDescription
MetaInfoDescriptionVisualizer() : MetaInfoDescriptionVisualizer
MetaInfoInterface() : MetaInfoInterface
MetaInfoInterfaceUtils() : MetaInfoInterfaceUtils
MetaInfoRegistry() : MetaInfoRegistry
MetaInfoVisualizer() : MetaInfoVisualizer
metaPasses_() : DataFilters
metaRegistry() : MetaInfoInterface
MetaStatsValue_() : LayerStatisticsDialog::MetaStatsValue_
metaValueExists() : MetaInfoInterface
minBound() : Histogram< ValueType, BinSizeType >
MinimumDistance() : MinimumDistance
minNegative() : DPosition< D, TCoordinateType >
minPosition() : DIntervalBase< D >
minPositive() : DPosition< D, TCoordinateType >
minValue() : Histogram< ValueType, BinSizeType >
minX() : DIntervalBase< D >
minY() : DIntervalBase< D >
mirrorModeActive() : Spectrum1DCanvas
MissingInformation() : MissingInformation
MockFeature() : MockFeature
MockMRMFeature() : MockMRMFeature
MockSignalToNoise() : MockSignalToNoise
MockTransitionGroup() : MockTransitionGroup
ModelDescription() : ModelDescription< D >
Modification() : Modification , Peptide::Modification
modificationCorrectionTerm() : PScore
ModificationDefinition() : ModificationDefinition
ModificationDefinitionsSet() : ModificationDefinitionsSet
ModificationsDB() : ModificationsDB
modificationStatus_() : SpectrumCanvas
ModificationVisualizer() : ModificationVisualizer
modified() : ParamEditorDelegate , ParamEditor
ModifierRep() : ModifierRep
modifyStrings() : SVOutStream
monitorFileChanged_() : FileWatcher
monoIsotopicPeakIntensityFilter_() : MultiplexFiltering
MorphologicalFilter() : MorphologicalFilter
mouseDoubleClickEvent() : EnhancedTabBar , MultiGradientSelector , Spectrum2DCanvas , TOPPASEdge , TOPPASInputFileListVertex , TOPPASMergerVertex , TOPPASSplitterVertex , TOPPASTabBar , TOPPASToolVertex , TOPPASVertex
mouseMoveEvent() : HistogramWidget , MultiGradientSelector , Spectrum1DCanvas , Spectrum2DCanvas , Spectrum3DOpenGLCanvas , TOPPASTreeView , TOPPASVertex
mousePressEvent() : ColorSelector , HistogramWidget , MultiGradientSelector , Spectrum1DCanvas , Spectrum2DCanvas , Spectrum3DOpenGLCanvas , TOPPASTreeView , TOPPASVertex
mouseReleaseEvent() : HistogramWidget , MultiGradientSelector , Spectrum1DCanvas , Spectrum2DCanvas , Spectrum3DOpenGLCanvas , TOPPASVertex
move() : Annotation1DCaret , Annotation1DDistanceItem , Annotation1DItem , Annotation1DPeakItem , Annotation1DTextItem
moveCurrentItem() : TOPPASInputFilesDialog
moveNewEdgeTo_() : TOPPASVertex
moveSelectedItems() : TOPPASScene
mQ_() : TOFCalibration
mQAv_() : TOFCalibration
MRMAssay() : MRMAssay
MRMDecoy() : MRMDecoy
MRMFeature() : MRMFeature
MRMFeatureFinderScoring() : MRMFeatureFinderScoring
MRMFeatureOpenMS() : MRMFeatureOpenMS
MRMFragmentSelection() : MRMFragmentSelection
MRMIonSeries() : MRMIonSeries
MRMTransitionGroup() : MRMTransitionGroup< ChromatogramType, TransitionType >
MRMTransitionGroupPicker() : MRMTransitionGroupPicker
MS1Extraction_() : OpenSwathWorkflow
ms1FeatureClustering() : SuperHirnParameters
MS1FeatureMerger() : MS1FeatureMerger
MS2ConsensusSpectrum() : MS2ConsensusSpectrum
MS2Feature() : MS2Feature
MS2File() : MS2File
MS2Fragment() : MS2Fragment
MS2Info() : MS2Info
MSChromatogram() : MSChromatogram
MSDataAggregatingConsumer() : MSDataAggregatingConsumer
MSDataCachedConsumer() : MSDataCachedConsumer
MSDataChainingConsumer() : MSDataChainingConsumer
MSDataSqlConsumer() : MSDataSqlConsumer
MSDataStoringConsumer() : MSDataStoringConsumer
MSDataTransformingConsumer() : MSDataTransformingConsumer
MSDataWritingConsumer() : MSDataWritingConsumer
MSExperiment() : MSExperiment
msFilter_() : MapAlignmentAlgorithmSpectrumAlignment
MsInspectFile() : MsInspectFile
MSNumpressCoder() : MSNumpressCoder
MSPeak() : MSPeak
MSPFile() : MSPFile
MSQuantifications() : MSQuantifications
MSRun() : ExperimentalDesign::MSRun
MSSim() : MSSim
MSSpectrum() : MSSpectrum
MultiGradient() : MultiGradient
MultiGradientSelector() : MultiGradientSelector
MultiplexClustering() : MultiplexClustering
MultiplexDeltaMasses() : MultiplexDeltaMasses
MultiplexDeltaMassesGenerator() : MultiplexDeltaMassesGenerator
MultiplexDistance() : MultiplexClustering::MultiplexDistance
MultiplexFiltering() : MultiplexFiltering
MultiplexFilteringCentroided() : MultiplexFilteringCentroided
MultiplexFilteringProfile() : MultiplexFilteringProfile
MultiplexFilterResult() : MultiplexFilterResult
MultiplexFilterResultPeak() : MultiplexFilterResultPeak
MultiplexFilterResultRaw() : MultiplexFilterResultRaw
MultiplexIsotopicPeakPattern() : MultiplexIsotopicPeakPattern
myLog2_() : IsotopeWavelet
myPow() : IsotopeWavelet
myPow2_() : IsotopeWavelet
mz() : KDTreeFeatureMaps
MZBegin() : IsotopeWaveletTransform< PeakType >::TransSpectrum , MSSpectrum
MzDataFile() : MzDataFile
MzDataHandler() : MzDataHandler
MzDataValidator() : MzDataValidator
MZEnd() : IsotopeWaveletTransform< PeakType >::TransSpectrum , MSChromatogram , MSSpectrum
MzIdentMLDOMHandler() : MzIdentMLDOMHandler
MzIdentMLFile() : MzIdentMLFile
MzIdentMLHandler() : MzIdentMLHandler
MzIdentMLValidator() : MzIdentMLValidator
MzIterator() : MzIterator< FeaFiModuleType >
MzMLFile() : MzMLFile
MzMLHandler() : MzMLHandler
MzMLSpectrumDecoder() : MzMLSpectrumDecoder
MzMLSqliteHandler() : MzMLSqliteHandler
MzMLSwathFileConsumer() : MzMLSwathFileConsumer
MzMLValidator() : MzMLValidator
MzQuantMLFile() : MzQuantMLFile
MzQuantMLHandler() : MzQuantMLHandler
MzQuantMLValidator() : MzQuantMLValidator
MzTab() : MzTab
MzTabBoolean() : MzTabBoolean
MzTabDouble() : MzTabDouble
MzTabDoubleList() : MzTabDoubleList
MzTabFile() : MzTabFile
MzTabInteger() : MzTabInteger
MzTabIntegerList() : MzTabIntegerList
MzTabMetaData() : MzTabMetaData
MzTabModification() : MzTabModification
MzTabNullAbleBase() : MzTabNullAbleBase
MzTabNullNaNAndInfAbleBase() : MzTabNullNaNAndInfAbleBase
MzTabParameter() : MzTabParameter
MzTabProteinSectionRow() : MzTabProteinSectionRow
MzTabSpectraRef() : MzTabSpectraRef
MzTabString() : MzTabString
MzTabStringList() : MzTabStringList
mzToXAxis() : SpectrumCanvas
MZTrafoModel() : MZTrafoModel
MzXMLFile() : MzXMLFile
MzXMLHandler() : MzXMLHandler