OpenMS  2.7.0
ConsensusIDAlgorithmRanks.h
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31 // $Maintainer: Hendrik Weisser $
32 // $Authors: Andreas Bertsch, Marc Sturm, Sven Nahnsen, Hendrik Weisser $
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34 
35 #pragma once
36 
38 
39 namespace OpenMS
40 {
48  class OPENMS_DLLAPI ConsensusIDAlgorithmRanks :
50  {
51  public:
54 
55  private:
58 
61 
64 
67 
69  void preprocess_(std::vector<PeptideIdentification>& ids) override;
70 
72  double getAggregateScore_(std::vector<double>& scores,
73  bool higher_better) override;
74  };
75 
76 } // namespace OpenMS
77 
Abstract base class for ConsensusID algorithms that compare only identical sequences.
Definition: ConsensusIDAlgorithmIdentity.h:54
Calculates a consensus from multiple ID runs based on the ranks of the search hits.
Definition: ConsensusIDAlgorithmRanks.h:50
ConsensusIDAlgorithmRanks & operator=(const ConsensusIDAlgorithmRanks &)
Not implemented.
ConsensusIDAlgorithmRanks()
Default constructor.
double getAggregateScore_(std::vector< double > &scores, bool higher_better) override
Aggregate peptide scores into one final score (by averaging ranks)
void preprocess_(std::vector< PeptideIdentification > &ids) override
Assign peptide scores based on search ranks.
ConsensusIDAlgorithmRanks(const ConsensusIDAlgorithmRanks &)
Not implemented.
Size current_number_of_runs_
Number of ID runs for current analysis.
Definition: ConsensusIDAlgorithmRanks.h:57
Size current_considered_hits_
Number of considered hits for current analysis.
Definition: ConsensusIDAlgorithmRanks.h:60
size_t Size
Size type e.g. used as variable which can hold result of size()
Definition: Types.h:127
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47