OpenMS
2.7.0
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This is the complete list of members for CoarseIsotopePatternGenerator, including all inherited members.
calcFragmentIsotopeDist(const IsotopeDistribution &fragment_isotope_dist, const IsotopeDistribution &comp_fragment_isotope_dist, const std::set< UInt > &precursor_isotopes, const double fragment_mono_mass) const | CoarseIsotopePatternGenerator | |
calcFragmentIsotopeDist_(const IsotopeDistribution::ContainerType &fragment_isotope_dist, const IsotopeDistribution::ContainerType &comp_fragment_isotope_dist, const std::set< UInt > &precursor_isotopes) const | CoarseIsotopePatternGenerator | protected |
CoarseIsotopePatternGenerator() | CoarseIsotopePatternGenerator | |
CoarseIsotopePatternGenerator(const Size &max_isotope) | CoarseIsotopePatternGenerator | |
CoarseIsotopePatternGenerator(const Size &max_isotope, const bool round_masses) | CoarseIsotopePatternGenerator | |
convolve_(const IsotopeDistribution::ContainerType &left, const IsotopeDistribution::ContainerType &right) const | CoarseIsotopePatternGenerator | |
convolvePow_(const IsotopeDistribution::ContainerType &input, Size factor) const | CoarseIsotopePatternGenerator | |
convolveSquare_(const IsotopeDistribution::ContainerType &input) const | CoarseIsotopePatternGenerator | |
correctMass_(const IsotopeDistribution::ContainerType &input, const double mono_weight) const | CoarseIsotopePatternGenerator | |
estimateForFragmentFromDNAWeight(double average_weight_precursor, double average_weight_fragment, const std::set< UInt > &precursor_isotopes) | CoarseIsotopePatternGenerator | |
estimateForFragmentFromPeptideWeight(double average_weight_precursor, double average_weight_fragment, const std::set< UInt > &precursor_isotopes) | CoarseIsotopePatternGenerator | |
estimateForFragmentFromPeptideWeightAndS(double average_weight_precursor, UInt S_precursor, double average_weight_fragment, UInt S_fragment, const std::set< UInt > &precursor_isotopes) | CoarseIsotopePatternGenerator | |
estimateForFragmentFromRNAWeight(double average_weight_precursor, double average_weight_fragment, const std::set< UInt > &precursor_isotopes) | CoarseIsotopePatternGenerator | |
estimateForFragmentFromWeightAndComp(double average_weight_precursor, double average_weight_fragment, const std::set< UInt > &precursor_isotopes, double C, double H, double N, double O, double S, double P) | CoarseIsotopePatternGenerator | |
estimateFromDNAWeight(double average_weight) | CoarseIsotopePatternGenerator | |
estimateFromPeptideWeight(double average_weight) | CoarseIsotopePatternGenerator | |
estimateFromPeptideWeightAndS(double average_weight, UInt S) | CoarseIsotopePatternGenerator | |
estimateFromRNAWeight(double average_weight) | CoarseIsotopePatternGenerator | |
estimateFromWeightAndComp(double average_weight, double C, double H, double N, double O, double S, double P) | CoarseIsotopePatternGenerator | |
estimateFromWeightAndCompAndS(double average_weight, UInt S, double C, double H, double N, double O, double P) | CoarseIsotopePatternGenerator | |
fillGaps_(const IsotopeDistribution::ContainerType &id) const | CoarseIsotopePatternGenerator | protected |
getMaxIsotope() const | CoarseIsotopePatternGenerator | |
getRoundMasses() const | CoarseIsotopePatternGenerator | |
IsotopePatternGenerator() | IsotopePatternGenerator | |
IsotopePatternGenerator(double probability_cutoff) | IsotopePatternGenerator | |
max_isotope_ | CoarseIsotopePatternGenerator | protected |
min_prob_ | IsotopePatternGenerator | protected |
operator=(const CoarseIsotopePatternGenerator &iso) | CoarseIsotopePatternGenerator | |
round_masses_ | CoarseIsotopePatternGenerator | protected |
run(const EmpiricalFormula &) const override | CoarseIsotopePatternGenerator | virtual |
setMaxIsotope(const Size &max_isotope) | CoarseIsotopePatternGenerator | |
setRoundMasses(const bool round_masses) | CoarseIsotopePatternGenerator | |
~CoarseIsotopePatternGenerator() | CoarseIsotopePatternGenerator | virtual |
~IsotopePatternGenerator() | IsotopePatternGenerator | virtual |