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OpenMS
Feature
Feature Member List
This is the complete list of members for
Feature
, including all inherited members.
addMetaValues
(const MetaInfoInterface &from)
MetaInfoInterface
AnnotationState
enum name
BaseFeature
applyMemberFunction
(Size(Type::*member_function)())
Feature
inline
applyMemberFunction
(Size(Type::*member_function)() const) const
Feature
inline
BaseFeature
()
BaseFeature
BaseFeature
(const BaseFeature &feature)=default
BaseFeature
BaseFeature
(BaseFeature &&feature)=default
BaseFeature
BaseFeature
(const BaseFeature &rhs, UInt64 map_index)
BaseFeature
BaseFeature
(const Peak2D &point)
BaseFeature
explicit
BaseFeature
(const RichPeak2D &point)
BaseFeature
explicit
BaseFeature
(const FeatureHandle &fh)
BaseFeature
explicit
charge_
BaseFeature
protected
ChargeType
typedef
BaseFeature
clearMetaInfo
()
MetaInfoInterface
clearUniqueId
()
UniqueIdInterface
inline
convex_hull_
Feature
mutable
protected
convex_hulls_
Feature
protected
convex_hulls_modified_
Feature
mutable
protected
CoordinateType
typedef
Peak2D
createIfNotExists_
()
MetaInfoInterface
inline
protected
DIMENSION
enum value
Peak2D
dimension_name_full_
Peak2D
protected
static
dimension_name_short_
Peak2D
protected
static
dimension_unit_full_
Peak2D
protected
static
dimension_unit_short_
Peak2D
protected
static
DimensionDescription
enum name
Peak2D
encloses
(double rt, double mz) const
Feature
ensureUniqueId
()
UniqueIdInterface
inline
Feature
()
Feature
Feature
(const BaseFeature &base)
Feature
explicit
Feature
(const Feature &feature)
Feature
Feature
(Feature &&) noexcept
Feature
FEATURE_ID_MULTIPLE_DIVERGENT
enum value
BaseFeature
FEATURE_ID_MULTIPLE_SAME
enum value
BaseFeature
FEATURE_ID_NONE
enum value
BaseFeature
FEATURE_ID_SINGLE
enum value
BaseFeature
fullDimensionName
(UInt const dim)
Peak2D
static
fullDimensionNameMZ
()
Peak2D
static
fullDimensionNameRT
()
Peak2D
static
fullDimensionUnit
(UInt const dim)
Peak2D
static
fullDimensionUnitMZ
()
Peak2D
static
fullDimensionUnitRT
()
Peak2D
static
getAnnotationState
() const
BaseFeature
getCharge
() const
BaseFeature
getConvexHull
() const
Feature
getConvexHulls
() const
Feature
getConvexHulls
()
Feature
getIntensity
() const
Peak2D
inline
getKeys
(std::vector< String > &keys) const
MetaInfoInterface
getKeys
(std::vector< UInt > &keys) const
MetaInfoInterface
getMetaValue
(const String &name, const DataValue &default_value=DataValue::EMPTY) const
MetaInfoInterface
getMetaValue
(UInt index, const DataValue &default_value=DataValue::EMPTY) const
MetaInfoInterface
getMZ
() const
Peak2D
inline
getOverallQuality
() const
Feature
getPeptideIdentifications
() const
BaseFeature
getPeptideIdentifications
()
BaseFeature
getPosition
() const
Peak2D
inline
getPosition
()
Peak2D
inline
getQuality
(Size index) const
Feature
OpenMS::BaseFeature::getQuality
() const
BaseFeature
getRT
() const
Peak2D
inline
getSubordinates
() const
Feature
getSubordinates
()
Feature
getUniqueId
() const
UniqueIdInterface
inline
getWidth
() const
BaseFeature
hasInvalidUniqueId
() const
UniqueIdInterface
inline
hasValidUniqueId
() const
UniqueIdInterface
inline
intensity_
Peak2D
protected
IntensityType
typedef
Peak2D
INVALID
enum value
UniqueIdInterface
isMetaEmpty
() const
MetaInfoInterface
isValid
(UInt64 unique_id)
UniqueIdInterface
inline
static
meta_
MetaInfoInterface
protected
MetaInfoInterface
()
MetaInfoInterface
MetaInfoInterface
(const MetaInfoInterface &rhs)
MetaInfoInterface
MetaInfoInterface
(MetaInfoInterface &&) noexcept
MetaInfoInterface
metaRegistry
()
MetaInfoInterface
static
metaValueExists
(const String &name) const
MetaInfoInterface
metaValueExists
(UInt index) const
MetaInfoInterface
MZ
enum value
Peak2D
NamesOfAnnotationState
BaseFeature
static
operator!=
(const BaseFeature &rhs) const
BaseFeature
OpenMS::RichPeak2D::operator!=
(const RichPeak2D &rhs) const
RichPeak2D
inline
OpenMS::Peak2D::operator!=
(const Peak2D &rhs) const
Peak2D
inline
OpenMS::MetaInfoInterface::operator!=
(const MetaInfoInterface &rhs) const
MetaInfoInterface
operator=
(const Feature &rhs)
Feature
operator=
(Feature &&) &noexcept
Feature
OpenMS::BaseFeature::operator=
(const BaseFeature &rhs)=default
BaseFeature
OpenMS::BaseFeature::operator=
(BaseFeature &&rhs) &=default
BaseFeature
OpenMS::RichPeak2D::operator=
(const RichPeak2D &rhs)=default
RichPeak2D
OpenMS::RichPeak2D::operator=
(RichPeak2D &&rhs) &=default
RichPeak2D
OpenMS::RichPeak2D::operator=
(const Peak2D &rhs)
RichPeak2D
inline
OpenMS::Peak2D::operator=
(Peak2D &&) &=default
Peak2D
OpenMS::MetaInfoInterface::operator=
(const MetaInfoInterface &rhs)
MetaInfoInterface
OpenMS::MetaInfoInterface::operator=
(MetaInfoInterface &&) noexcept
MetaInfoInterface
OpenMS::UniqueIdInterface::operator=
(UniqueIdInterface const &rhs)=default
UniqueIdInterface
OpenMS::UniqueIdInterface::operator=
(UniqueIdInterface &&) &=default
UniqueIdInterface
operator==
(const Feature &rhs) const
Feature
OpenMS::BaseFeature::operator==
(const BaseFeature &rhs) const
BaseFeature
OpenMS::RichPeak2D::operator==
(const RichPeak2D &rhs) const
RichPeak2D
inline
OpenMS::Peak2D::operator==
(const Peak2D &rhs) const
Peak2D
inline
OpenMS::MetaInfoInterface::operator==
(const MetaInfoInterface &rhs) const
MetaInfoInterface
OpenMS::UniqueIdInterface::operator==
(UniqueIdInterface const &rhs) const
UniqueIdInterface
inline
OverallQualityLess
typedef
Feature
Peak2D
()
Peak2D
inline
Peak2D
(const PositionType &pos, const IntensityType in)
Peak2D
inline
explicit
Peak2D
(const Peak2D &p)=default
Peak2D
Peak2D
(Peak2D &&)=default
Peak2D
peptides_
BaseFeature
protected
position_
Peak2D
protected
PositionType
typedef
Peak2D
qualities_
Feature
protected
quality_
BaseFeature
protected
QualityType
typedef
BaseFeature
removeMetaValue
(const String &name)
MetaInfoInterface
removeMetaValue
(UInt index)
MetaInfoInterface
RichPeak2D
()
RichPeak2D
inline
RichPeak2D
(const RichPeak2D &p)=default
RichPeak2D
RichPeak2D
(const Peak2D &p)
RichPeak2D
inline
explicit
RichPeak2D
(const PositionType &pos, const IntensityType in)
RichPeak2D
inline
explicit
RichPeak2D
(RichPeak2D &&p)=default
RichPeak2D
RT
enum value
Peak2D
setCharge
(const ChargeType &ch)
BaseFeature
setConvexHulls
(const std::vector< ConvexHull2D > &hulls)
Feature
setIntensity
(IntensityType intensity)
Peak2D
inline
setMetaValue
(const String &name, const DataValue &value)
MetaInfoInterface
setMetaValue
(UInt index, const DataValue &value)
MetaInfoInterface
setMZ
(CoordinateType coordinate)
Peak2D
inline
setOverallQuality
(QualityType q)
Feature
setPeptideIdentifications
(const std::vector< PeptideIdentification > &peptides)
BaseFeature
setPosition
(const PositionType &position)
Peak2D
inline
setQuality
(Size index, QualityType q)
Feature
OpenMS::BaseFeature::setQuality
(QualityType q)
BaseFeature
setRT
(CoordinateType coordinate)
Peak2D
inline
setSubordinates
(const std::vector< Feature > &rhs)
Feature
setUniqueId
()
UniqueIdInterface
inline
setUniqueId
(UInt64 rhs)
UniqueIdInterface
inline
setUniqueId
(const String &rhs)
UniqueIdInterface
setWidth
(WidthType fwhm)
BaseFeature
shortDimensionName
(UInt const dim)
Peak2D
static
shortDimensionNameMZ
()
Peak2D
static
shortDimensionNameRT
()
Peak2D
static
shortDimensionUnit
(UInt const dim)
Peak2D
static
shortDimensionUnitMZ
()
Peak2D
static
shortDimensionUnitRT
()
Peak2D
static
SIZE_OF_ANNOTATIONSTATE
enum value
BaseFeature
sortPeptideIdentifications
()
BaseFeature
subordinates_
Feature
protected
swap
(UniqueIdInterface &from)
UniqueIdInterface
inline
unique_id_
UniqueIdInterface
protected
UniqueIdInterface
()
UniqueIdInterface
inline
UniqueIdInterface
(const UniqueIdInterface &rhs)=default
UniqueIdInterface
UniqueIdInterface
(UniqueIdInterface &&rhs)=default
UniqueIdInterface
width_
BaseFeature
protected
WidthType
typedef
BaseFeature
~BaseFeature
() override
BaseFeature
~Feature
() override
Feature
~MetaInfoInterface
()
MetaInfoInterface
~Peak2D
()
Peak2D
inline
~RichPeak2D
() override
RichPeak2D
inline
~UniqueIdInterface
()=default
UniqueIdInterface
virtual
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