ModificationDefinitionsSet Member List

This is the complete list of members for ModificationDefinitionsSet, including all inherited members.

addMatches_(std::multimap< double, ModificationDefinition > &matches, double mass, const String &residue, ResidueModification::TermSpecificity term_spec, const std::set< ModificationDefinition > &source, bool is_delta, double tolerance)	ModificationDefinitionsSet	protectedstatic
addModification(const ModificationDefinition &mod_def)	ModificationDefinitionsSet
findMatches(std::multimap< double, ModificationDefinition > &matches, double mass, const String &residue="", ResidueModification::TermSpecificity term_spec=ResidueModification::NUMBER_OF_TERM_SPECIFICITY, bool consider_fixed=true, bool consider_variable=true, bool is_delta=true, double tolerance=0.01) const	ModificationDefinitionsSet
fixed_mods_	ModificationDefinitionsSet	protected
getFixedModificationNames() const	ModificationDefinitionsSet
getFixedModifications() const	ModificationDefinitionsSet
getMaxModifications() const	ModificationDefinitionsSet
getModificationNames() const	ModificationDefinitionsSet
getModificationNames(StringList &fixed_modifications, StringList &variable_modifications) const	ModificationDefinitionsSet
getModifications() const	ModificationDefinitionsSet
getNumberOfFixedModifications() const	ModificationDefinitionsSet
getNumberOfModifications() const	ModificationDefinitionsSet
getNumberOfVariableModifications() const	ModificationDefinitionsSet
getVariableModificationNames() const	ModificationDefinitionsSet
getVariableModifications() const	ModificationDefinitionsSet
inferFromPeptides(const std::vector< PeptideIdentification > &peptides)	ModificationDefinitionsSet
isCompatible(const AASequence &peptide) const	ModificationDefinitionsSet
max_mods_per_peptide_	ModificationDefinitionsSet	protected
ModificationDefinitionsSet()	ModificationDefinitionsSet
ModificationDefinitionsSet(const ModificationDefinitionsSet &rhs)	ModificationDefinitionsSet
ModificationDefinitionsSet(const StringList &fixed_modifications, const StringList &variable_modifications)	ModificationDefinitionsSet
operator!=(const ModificationDefinitionsSet &rhs) const	ModificationDefinitionsSet
operator=(const ModificationDefinitionsSet &element)	ModificationDefinitionsSet
operator==(const ModificationDefinitionsSet &rhs) const	ModificationDefinitionsSet
setMaxModifications(Size max_mod)	ModificationDefinitionsSet
setModifications(const std::set< ModificationDefinition > &mod_defs)	ModificationDefinitionsSet
setModifications(const String &fixed_modifications, const String &variable_modifications)	ModificationDefinitionsSet
setModifications(const StringList &fixed_modifications, const StringList &variable_modifications)	ModificationDefinitionsSet
variable_mods_	ModificationDefinitionsSet	protected
~ModificationDefinitionsSet()	ModificationDefinitionsSet	virtual