OpenMS  2.7.0
OfflinePrecursorIonSelection Member List

This is the complete list of members for OfflinePrecursorIonSelection, including all inherited members.

calculateXICs_(const FeatureMap &features, const std::vector< std::vector< std::pair< Size, Size > > > &mass_ranges, const PeakMap &experiment, const std::set< Int > &charges_set, std::vector< std::vector< std::pair< Size, double > > > &xics)OfflinePrecursorIonSelectionprivate
check_defaults_DefaultParamHandlerprotected
checkMassRanges_(std::vector< std::vector< std::pair< Size, Size > > > &mass_ranges, const PeakMap &experiment)OfflinePrecursorIonSelectionprivate
createProteinSequenceBasedLPInclusionList(String include, String rt_model_file, String pt_model_file, FeatureMap &precursors)OfflinePrecursorIonSelection
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
error_name_DefaultParamHandlerprotected
ExclusionListType_ typedefOfflinePrecursorIonSelectionprivate
getDefaults() constDefaultParamHandler
getLPSolver()OfflinePrecursorIonSelectioninline
getMassRanges(const FeatureMap &features, const PeakMap &experiment, std::vector< std::vector< std::pair< Size, Size > > > &indices)OfflinePrecursorIonSelection
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getSubsections() constDefaultParamHandler
IndexTriple typedefOfflinePrecursorIonSelection
makePrecursorSelectionForKnownLCMSMap(const FeatureMap &features, const PeakMap &experiment, PeakMap &ms2, std::set< Int > &charges_set, bool feature_based)OfflinePrecursorIonSelection
OfflinePrecursorIonSelection()OfflinePrecursorIonSelection
operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
setLPSolver(LPWrapper::SOLVER solver)OfflinePrecursorIonSelectioninline
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
solver_OfflinePrecursorIonSelectionprivate
subsections_DefaultParamHandlerprotected
updateExclusionList_(ExclusionListType_ &exclusion_list) constOfflinePrecursorIonSelectionprivate
updateMembers_()DefaultParamHandlerprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &prefix="")DefaultParamHandlerstatic
~DefaultParamHandler()DefaultParamHandlervirtual
~OfflinePrecursorIonSelection() overrideOfflinePrecursorIonSelection