OpenMS  2.8.0
MapUtilities.h
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31 // $Maintainer: Julianus Pfeuffer$
32 // $Authors: Julianus Pfeuffer $
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34 
35 #pragma once
36 
37 #include <OpenMS/config.h>
39 #include <vector>
40 
41 namespace OpenMS
42 {
48  template <class MapType>
50  {
51  public:
53  template <class T>
54  void applyFunctionOnPeptideHits(T&& f, bool include_unassigned = true)
55  {
56  for (auto& feat : static_cast<MapType&>(*this))
57  {
58  applyFunctionOnPeptideHits_(feat.getPeptideIdentifications(), f);
59  }
60  if (include_unassigned)
61  {
62  applyFunctionOnPeptideHits_(static_cast<MapType&>(*this).getUnassignedPeptideIdentifications(), f);
63  }
64  }
65 
67  template <class T>
68  void applyFunctionOnPeptideIDs(T&& f, bool include_unassigned = true)
69  {
70  for (auto& feat : static_cast<MapType&>(*this))
71  {
72  applyFunctionOnPeptideIDs_(feat.getPeptideIdentifications(), f);
73  }
74  if (include_unassigned)
75  {
76  applyFunctionOnPeptideIDs_(static_cast<MapType&>(*this).getUnassignedPeptideIdentifications(), f);
77  }
78  }
79 
81  template <class T>
82  void applyFunctionOnPeptideHits(T&& f, bool include_unassigned = true) const
83  {
84  for (const auto& feat : static_cast<MapType const&>(*this))
85  {
86  applyFunctionOnPeptideHits_(feat.getPeptideIdentifications(), f);
87  }
88  if (include_unassigned)
89  {
90  applyFunctionOnPeptideHits_(static_cast<MapType const&>(*this).getUnassignedPeptideIdentifications(), f);
91  }
92  }
93 
95  template <class T>
96  void applyFunctionOnPeptideIDs(T&& f, bool include_unassigned = true) const
97  {
98  for (const auto& feat : static_cast<MapType const&>(*this))
99  {
100  applyFunctionOnPeptideIDs_(feat.getPeptideIdentifications(), f);
101  }
102  if (include_unassigned)
103  {
104  applyFunctionOnPeptideIDs_(static_cast<MapType const&>(*this).getUnassignedPeptideIdentifications(), f);
105  }
106  }
107 
108  private:
109  template <class T>
110  void applyFunctionOnPeptideIDs_(std::vector<PeptideIdentification>& idvec, T&& f)
111  {
112  for (auto& id : idvec)
113  {
114  f(id);
115  }
116  }
117 
118  template <class T>
119  void applyFunctionOnPeptideHits_(std::vector<PeptideIdentification>& idvec, T&& f)
120  {
121  for (auto& id : idvec)
122  {
123  for (auto& hit : id.getHits())
124  {
125  f(hit);
126  }
127  }
128  }
129 
130  template <class T>
131  void applyFunctionOnPeptideIDs_(const std::vector<PeptideIdentification>& idvec, T&& f) const
132  {
133  for (const auto& id : idvec)
134  {
135  f(id);
136  }
137  }
138 
139  template <class T>
140  void applyFunctionOnPeptideHits_(const std::vector<PeptideIdentification>& idvec, T&& f) const
141  {
142  for (const auto& id : idvec)
143  {
144  for (const auto& hit : id.getHits())
145  {
146  f(hit);
147  }
148  }
149  }
150  };
151 
152 } // namespace OpenMS
153 
In-Memory representation of a mass spectrometry run.
Definition: MSExperiment.h:73
Utilities for Feature and ConsensusMap.
Definition: MapUtilities.h:50
void applyFunctionOnPeptideIDs(T &&f, bool include_unassigned=true) const
applies a const function on all PeptideIDs or only assigned ones
Definition: MapUtilities.h:96
void applyFunctionOnPeptideHits_(const std::vector< PeptideIdentification > &idvec, T &&f) const
Definition: MapUtilities.h:140
void applyFunctionOnPeptideIDs_(const std::vector< PeptideIdentification > &idvec, T &&f) const
Definition: MapUtilities.h:131
void applyFunctionOnPeptideHits(T &&f, bool include_unassigned=true)
applies a function on all PeptideHits or only assigned ones
Definition: MapUtilities.h:54
void applyFunctionOnPeptideIDs(T &&f, bool include_unassigned=true)
applies a function on all PeptideIDs or only assigned ones
Definition: MapUtilities.h:68
void applyFunctionOnPeptideIDs_(std::vector< PeptideIdentification > &idvec, T &&f)
Definition: MapUtilities.h:110
void applyFunctionOnPeptideHits_(std::vector< PeptideIdentification > &idvec, T &&f)
Definition: MapUtilities.h:119
void applyFunctionOnPeptideHits(T &&f, bool include_unassigned=true) const
applies a const function on all PeptideHits or only assigned ones
Definition: MapUtilities.h:82
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47