PTMXMLHandler.h

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2023.
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// $Maintainer: Timo Sachsenberg $
// $Authors: $
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#pragma once
 
#include <OpenMS/FORMAT/HANDLERS/XMLHandler.h>
 
#include <vector>
#include <map>
#include <fstream>
 
namespace OpenMS
{
  namespace Internal
  {
    class OPENMS_DLLAPI PTMXMLHandler :
      public XMLHandler
    {
public:
      PTMXMLHandler(std::map<String, std::pair<String, String> > & ptm_informations, const String & filename);
 
      ~PTMXMLHandler() override;
 
      void writeTo(std::ostream & os) override;
 
      // Docu in base class
      void endElement(const XMLCh * const /*uri*/, const XMLCh * const /*local_name*/, const XMLCh * const qname) override;
 
      // Docu in base class
      void startElement(const XMLCh * const /*uri*/, const XMLCh * const /*local_name*/, const XMLCh * const qname, const xercesc::Attributes & attributes) override;
 
      // Docu in base class
      void characters(const XMLCh * const chars, const XMLSize_t /*length*/) override;
 
protected:
      std::map<String, std::pair<String, String> > & ptm_informations_;
      String name_, tag_, composition_;
      bool open_tag_;
    };
 
  }   // namespace Internal
 
} // namespace OpenMS