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FASTAFile Member List

This is the complete list of members for FASTAFile, including all inherited members.

atEnd()FASTAFile
CMD enum valueProgressLogger
current_logger_ProgressLoggermutableprotected
description_FASTAFileprotected
endProgress(UInt64 bytes_processed=0) constProgressLogger
entries_read_FASTAFileprotected
FASTAFile()=defaultFASTAFile
fileSize_FASTAFileprotected
getLogType() constProgressLogger
GUI enum valueProgressLogger
id_FASTAFileprotected
infile_FASTAFileprotected
last_invoke_ProgressLoggermutableprotected
load(const String &filename, std::vector< FASTAEntry > &data) constFASTAFile
LogType enum nameProgressLogger
nextProgress() constProgressLogger
NONE enum valueProgressLogger
operator=(const ProgressLogger &other)ProgressLogger
outfile_FASTAFileprotected
position()FASTAFile
ProgressLogger()ProgressLogger
ProgressLogger(const ProgressLogger &other)ProgressLogger
readEntry_(std::string &id, std::string &description, std::string &seq)FASTAFileprotected
readNext(FASTAEntry &protein)FASTAFile
readNextWithProgress(FASTAEntry &protein)FASTAFile
readStart(const String &filename)FASTAFile
readStartWithProgress(const String &filename, const String &progress_label)FASTAFile
recursion_depth_ProgressLoggerprotectedstatic
seq_FASTAFileprotected
setLogger(ProgressLoggerImpl *logger)ProgressLogger
setLogType(LogType type) constProgressLogger
setPosition(const std::streampos &pos)FASTAFile
setProgress(SignedSize value) constProgressLogger
startProgress(SignedSize begin, SignedSize end, const String &label) constProgressLogger
store(const String &filename, const std::vector< FASTAEntry > &data) constFASTAFile
type_ProgressLoggermutableprotected
writeEnd()FASTAFile
writeNext(const FASTAEntry &protein)FASTAFile
writeStart(const String &filename)FASTAFile
~FASTAFile() override=defaultFASTAFile
~ProgressLogger()ProgressLoggervirtual