GaussFilter.h

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//                   OpenMS -- Open-Source Mass Spectrometry
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2022.
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// $Maintainer: Timo Sachsenberg $
// $Authors: Eva Lange $
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#pragma once

#include <OpenMS/CONCEPT/Constants.h>
#include <OpenMS/CONCEPT/ProgressLogger.h>
#include <OpenMS/DATASTRUCTURES/DefaultParamHandler.h>
#include <OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h>
#include <OpenMS/KERNEL/StandardTypes.h>

namespace OpenMS
{
//#define DEBUG_FILTERING

  class OPENMS_DLLAPI GaussFilter :
    public ProgressLogger,
    public DefaultParamHandler
  {
public:
    GaussFilter();

    ~GaussFilter() override = default;

    void filter(MSSpectrum & spectrum);

    void filter(MSChromatogram & chromatogram);

    void filterExperiment(PeakMap & map);

protected:

    GaussFilterAlgorithm gauss_algo_;

    double spacing_;

    bool write_log_messages_ = false;

    // Docu in base class
    void updateMembers_() override;
  };

} // namespace OpenMS