ANALYSIS → KERNEL Relation

File in OpenMS/ANALYSIS	Includes file in OpenMS/KERNEL
OPENSWATH / DATAACCESS / DataAccessHelper.h	MSSpectrum.h
OPENSWATH / DATAACCESS / DataAccessHelper.h	MSChromatogram.h
OPENSWATH / DATAACCESS / MRMFeatureAccessOpenMS.h	Feature.h
OPENSWATH / DATAACCESS / MRMFeatureAccessOpenMS.h	MRMFeature.h
OPENSWATH / DATAACCESS / MRMFeatureAccessOpenMS.h	MRMTransitionGroup.h
OPENSWATH / DATAACCESS / SimpleOpenMSSpectraAccessFactory.h	StandardTypes.h
OPENSWATH / DATAACCESS / SimpleOpenMSSpectraAccessFactory.h	MSExperiment.h
OPENSWATH / DATAACCESS / SpectrumAccessOpenMS.h	StandardTypes.h
OPENSWATH / DATAACCESS / SpectrumAccessOpenMS.h	MSSpectrum.h
OPENSWATH / DATAACCESS / SpectrumAccessOpenMS.h	MSChromatogram.h
OPENSWATH / DATAACCESS / SpectrumAccessOpenMS.h	MSExperiment.h
OPENSWATH / DATAACCESS / SpectrumAccessOpenMSCached.h	StandardTypes.h
OPENSWATH / DATAACCESS / SpectrumAccessOpenMSCached.h	MSSpectrum.h
OPENSWATH / DATAACCESS / SpectrumAccessOpenMSCached.h	MSChromatogram.h
OPENSWATH / DATAACCESS / SpectrumAccessOpenMSCached.h	MSExperiment.h
OPENSWATH / DATAACCESS / SpectrumAccessOpenMSInMemory.h	StandardTypes.h
OPENSWATH / DATAACCESS / SpectrumAccessOpenMSInMemory.h	MSSpectrum.h
OPENSWATH / DATAACCESS / SpectrumAccessOpenMSInMemory.h	MSChromatogram.h
OPENSWATH / DATAACCESS / SpectrumAccessOpenMSInMemory.h	MSExperiment.h
OPENSWATH / DATAACCESS / SpectrumAccessSqMass.h	StandardTypes.h
OPENSWATH / DATAACCESS / SpectrumAccessSqMass.h	MSSpectrum.h
OPENSWATH / DATAACCESS / SpectrumAccessSqMass.h	MSChromatogram.h
OPENSWATH / DATAACCESS / SpectrumAccessSqMass.h	MSExperiment.h
DECHARGING / FeatureDeconvolution.h	FeatureMap.h
DECHARGING / FeatureDeconvolution.h	ConsensusMap.h
DECHARGING / MetaboliteFeatureDeconvolution.h	FeatureMap.h
DECHARGING / MetaboliteFeatureDeconvolution.h	ConsensusMap.h
ID / AccurateMassSearchEngine.h	MassTrace.h
ID / AccurateMassSearchEngine.h	Feature.h
ID / AccurateMassSearchEngine.h	ConsensusFeature.h
ID / AccurateMassSearchEngine.h	FeatureMap.h
ID / AccurateMassSearchEngine.h	ConsensusMap.h
ID / AScore.h	StandardTypes.h
ID / AScore.h	MSSpectrum.h
ID / BasicProteinInferenceAlgorithm.h	ConsensusMap.h
ID / ConsensusMapMergerAlgorithm.h	ConsensusMap.h
ID / FalseDiscoveryRate.h	ConsensusMap.h
ID / FragmentIndex.h	MSExperiment.h
ID / FragmentIndex.h	Peak1D.h
ID / HyperScore.h	StandardTypes.h
ID / HyperScore.h	MSSpectrum.h
ID / IDBoostGraph.h	StandardTypes.h
ID / IDConflictResolverAlgorithm.h	ConsensusMap.h
ID / IDConflictResolverAlgorithm.h	FeatureMap.h
ID / IDMapper.h	StandardTypes.h
ID / IDMapper.h	MSExperiment.h
ID / IDMapper.h	FeatureMap.h
ID / IDMapper.h	ConsensusMap.h
ID / IDMergerAlgorithm.h	ConsensusMap.h
ID / IDScoreGetterSetter.h	ConsensusMap.h
ID / IDScoreSwitcherAlgorithm.h	ConsensusMap.h
ID / IonIdentityMolecularNetworking.h	ConsensusMap.h
ID / MetaboliteSpectralMatching.h	MassTrace.h
ID / MetaboliteSpectralMatching.h	Feature.h
ID / MetaboliteSpectralMatching.h	FeatureMap.h
ID / MetaboliteSpectralMatching.h	MSExperiment.h
ID / MetaboliteSpectralMatching.h	MSSpectrum.h
ID / MorpheusScore.h	StandardTypes.h
ID / NeighborSeq.h	MSSpectrum.h
ID / PeptideIndexing.h	StandardTypes.h
ID / PeptideProteinResolution.h	StandardTypes.h
ID / PeptideSearchEngineFIAlgorithm.h	MSExperiment.h
ID / PercolatorFeatureSetHelper.h	StandardTypes.h
ID / PrecursorPurity.h	StandardTypes.h
ID / PrecursorPurity.h	MSExperiment.h
ID / PScore.h	StandardTypes.h
ID / SimpleSearchEngineAlgorithm.h	MSExperiment.h
ID / SiriusMSConverter.h	StandardTypes.h
MAPMATCHING / BaseGroupFinder.h	ConsensusMap.h
MAPMATCHING / BaseSuperimposer.h	ConsensusMap.h
MAPMATCHING / ConsensusMapNormalizerAlgorithmMedian.h	ConsensusMap.h
MAPMATCHING / ConsensusMapNormalizerAlgorithmQuantile.h	ConsensusMap.h
MAPMATCHING / ConsensusMapNormalizerAlgorithmThreshold.h	ConsensusMap.h
MAPMATCHING / FeatureDistance.h	BaseFeature.h
MAPMATCHING / FeatureGroupingAlgorithm.h	FeatureMap.h
MAPMATCHING / FeatureGroupingAlgorithm.h	ConsensusMap.h
MAPMATCHING / FeatureGroupingAlgorithmUnlabeled.h	ConversionHelper.h
MAPMATCHING / FeatureMapping.h	BaseFeature.h
MAPMATCHING / FeatureMapping.h	FeatureMap.h
MAPMATCHING / FeatureMapping.h	MSExperiment.h
MAPMATCHING / MapAlignmentAlgorithmIdentification.h	StandardTypes.h
MAPMATCHING / MapAlignmentAlgorithmIdentification.h	ConsensusMap.h
MAPMATCHING / MapAlignmentAlgorithmIdentification.h	FeatureMap.h
MAPMATCHING / MapAlignmentAlgorithmIdentification.h	MSExperiment.h
MAPMATCHING / MapAlignmentAlgorithmPoseClustering.h	ConsensusMap.h
MAPMATCHING / MapAlignmentAlgorithmPoseClustering.h	ConversionHelper.h
MAPMATCHING / MapAlignmentEvaluationAlgorithm.h	ConsensusMap.h
MAPMATCHING / MapAlignmentTransformer.h	StandardTypes.h
MAPMATCHING / MapAlignmentTransformer.h	MSExperiment.h
MAPMATCHING / MapAlignmentTransformer.h	FeatureMap.h
MAPMATCHING / PoseClusteringAffineSuperimposer.h	ConsensusMap.h
MAPMATCHING / PoseClusteringAffineSuperimposer.h	Peak2D.h
MAPMATCHING / TransformationModel.h	StandardTypes.h
MAPMATCHING / TransformationModelLinear.h	StandardTypes.h
MRM / ReactionMonitoringTransition.h	StandardTypes.h
NUXL / NuXLAnnotateAndLocate.h	StandardTypes.h
NUXL / NuXLConstants.h	StandardTypes.h
NUXL / NuXLDeisotoper.h	StandardTypes.h
NUXL / NuXLFDR.h	StandardTypes.h
NUXL / NuXLFragmentAdductDefinition.h	StandardTypes.h
NUXL / NuXLFragmentAnnotationHelper.h	StandardTypes.h
NUXL / NuXLFragmentIonGenerator.h	StandardTypes.h
NUXL / NuXLFragmentIonGenerator.h	MSSpectrum.h
NUXL / NuXLMarkerIonExtractor.h	StandardTypes.h
NUXL / NuXLModificationsGenerator.h	StandardTypes.h
NUXL / NuXLParameterParsing.h	StandardTypes.h
NUXL / NuXLReport.h	StandardTypes.h
NUXL / NuXLReport.h	MSSpectrum.h
NUXL / NuXLReport.h	MSExperiment.h
OPENSWATH / ChromatogramExtractor.h	MSExperiment.h
OPENSWATH / ConfidenceScoring.h	FeatureMap.h
OPENSWATH / DIAScoring.h	RangeManager.h
OPENSWATH / IonMobilityScoring.h	Mobilogram.h
OPENSWATH / IonMobilityScoring.h	MRMTransitionGroup.h
OPENSWATH / IonMobilityScoring.h	MSChromatogram.h
OPENSWATH / MasstraceCorrelator.h	ConsensusMap.h
OPENSWATH / MasstraceCorrelator.h	MSExperiment.h
OPENSWATH / MRMBatchFeatureSelector.h	FeatureMap.h
OPENSWATH / MRMFeatureFilter.h	MRMFeature.h
OPENSWATH / MRMFeatureFilter.h	Feature.h
OPENSWATH / MRMFeatureFilter.h	FeatureMap.h
OPENSWATH / MRMFeatureFinderScoring.h	StandardTypes.h
OPENSWATH / MRMFeatureFinderScoring.h	FeatureMap.h
OPENSWATH / MRMFeatureFinderScoring.h	MRMTransitionGroup.h
OPENSWATH / MRMFeatureFinderScoring.h	MRMFeature.h
OPENSWATH / MRMFeatureFinderScoring.h	MSSpectrum.h
OPENSWATH / MRMFeatureFinderScoring.h	MSChromatogram.h
OPENSWATH / MRMFeatureQC.h	MRMFeature.h
OPENSWATH / MRMFeatureQC.h	Feature.h
OPENSWATH / MRMFeatureQC.h	FeatureMap.h
OPENSWATH / MRMFeatureSelector.h	FeatureMap.h
OPENSWATH / MRMTransitionGroupPicker.h	MRMTransitionGroup.h
OPENSWATH / MRMTransitionGroupPicker.h	MRMFeature.h
OPENSWATH / MRMTransitionGroupPicker.h	MSSpectrum.h
OPENSWATH / MRMTransitionGroupPicker.h	MSChromatogram.h
OPENSWATH / MRMTransitionGroupPicker.h	ChromatogramPeak.h
OPENSWATH / OpenSwathHelper.h	StandardTypes.h
OPENSWATH / OpenSwathHelper.h	MSExperiment.h
OPENSWATH / OpenSwathOSWWriter.h	FeatureMap.h
OPENSWATH / OpenSwathScoring.h	MRMTransitionGroup.h
OPENSWATH / OpenSwathScoring.h	MSChromatogram.h
OPENSWATH / OpenSwathWorkflow.h	MSExperiment.h
OPENSWATH / PeakIntegrator.h	MSChromatogram.h
OPENSWATH / PeakIntegrator.h	MSSpectrum.h
OPENSWATH / PeakPickerChromatogram.h	MSSpectrum.h
OPENSWATH / PeakPickerChromatogram.h	MSChromatogram.h
OPENSWATH / PeakPickerChromatogram.h	ChromatogramPeak.h
OPENSWATH / PeakPickerMobilogram.h	MSSpectrum.h
OPENSWATH / PeakPickerMobilogram.h	MSChromatogram.h
OPENSWATH / PeakPickerMobilogram.h	ChromatogramPeak.h
OPENSWATH / PeakPickerMobilogram.h	Mobilogram.h
OPENSWATH / PeakPickerMobilogram.h	MobilityPeak1D.h
OPENSWATH / SpectrumAddition.h	MSSpectrum.h
OPENSWATH / TargetedSpectraExtractor.h	BinnedSpectrum.h
OPENSWATH / TargetedSpectraExtractor.h	MSExperiment.h
OPENSWATH / TargetedSpectraExtractor.h	FeatureMap.h
QUANTITATION / AbsoluteQuantitation.h	StandardTypes.h
QUANTITATION / AbsoluteQuantitation.h	MSExperiment.h
QUANTITATION / AbsoluteQuantitation.h	MSChromatogram.h
QUANTITATION / AbsoluteQuantitation.h	FeatureMap.h
QUANTITATION / AbsoluteQuantitation.h	MRMTransitionGroup.h
QUANTITATION / AbsoluteQuantitation.h	MRMFeature.h
QUANTITATION / DDAWorkflowCommons.h	MSExperiment.h
QUANTITATION / IsobaricChannelExtractor.h	Peak2D.h
QUANTITATION / IsobaricChannelExtractor.h	MSExperiment.h
QUANTITATION / IsobaricChannelExtractor.h	StandardTypes.h
QUANTITATION / IsobaricNormalizer.h	Peak2D.h
QUANTITATION / IsobaricNormalizer.h	ConsensusFeature.h
QUANTITATION / IsobaricQuantitationMethod.h	Peak2D.h
QUANTITATION / IsotopeLabelingMDVs.h	FeatureMap.h
QUANTITATION / IsotopeLabelingMDVs.h	Feature.h
QUANTITATION / ItraqConstants.h	Peak2D.h
QUANTITATION / KDTreeFeatureMaps.h	StandardTypes.h
QUANTITATION / KDTreeFeatureMaps.h	Feature.h
QUANTITATION / PeptideAndProteinQuant.h	ConsensusMap.h
QUANTITATION / PeptideAndProteinQuant.h	FeatureMap.h
QUANTITATION / ProteinInference.h	Peak2D.h
TARGETED / ChromatogramProcessor.h	MSChromatogram.h
TARGETED / DIAChromHandler.h	MSChromatogram.h
TARGETED / IChromatogramHandler.h	MSChromatogram.h
TARGETED / IncludeExcludeTarget.h	StandardTypes.h
TARGETED / MetaboTargetedAssay.h	StandardTypes.h
TARGETED / MetaboTargetedTargetDecoy.h	StandardTypes.h
TARGETED / MRMChromHandler.h	MSChromatogram.h
TARGETED / MRMMapping.h	MSExperiment.h
TARGETED / TargetedExperiment.h	StandardTypes.h
TARGETED / TargetedExperimentHelper.h	StandardTypes.h
TOPDOWN / DeconvolvedSpectrum.h	MSSpectrum.h
TOPDOWN / FLASHDeconvAlgorithm.h	MSExperiment.h
TOPDOWN / FLASHDeconvAlgorithm.h	MSSpectrum.h
TOPDOWN / PeakGroupScoring.h	Peak1D.h
TOPDOWN / Qvalue.h	Peak1D.h
TOPDOWN / SpectralDeconvolution.h	MSExperiment.h
TOPDOWN / SpectralDeconvolution.h	MSSpectrum.h
XLMS / OpenPepXLAlgorithm.h	StandardTypes.h
XLMS / OpenPepXLAlgorithm.h	ConsensusMap.h
XLMS / OPXLDataStructs.h	StandardTypes.h
XLMS / OPXLDataStructs.h	MSExperiment.h
XLMS / OPXLHelper.h	StandardTypes.h
XLMS / OPXLSpectrumProcessingAlgorithms.h	StandardTypes.h
XLMS / OPXLSpectrumProcessingAlgorithms.h	Peak1D.h
XLMS / XFDRAlgorithm.h	StandardTypes.h
XLMS / XQuestScores.h	MSSpectrum.h
XLMS / XQuestScores.h	StandardTypes.h