| assignParameters(CharmmEEF1::Values ¶meters, Atom::Type I) const | CharmmEEF1 | |
| CharmmEEF1() | CharmmEEF1 | |
| CharmmEEF1(const CharmmEEF1 &charmm_EEF1) | CharmmEEF1 | |
| clear() | CharmmEEF1 | [virtual] |
| Cp_ref_ (defined in CharmmEEF1) | CharmmEEF1 | [protected] |
| dG_free_ (defined in CharmmEEF1) | CharmmEEF1 | [protected] |
| dG_ref_ (defined in CharmmEEF1) | CharmmEEF1 | [protected] |
| dH_ref_ (defined in CharmmEEF1) | CharmmEEF1 | [protected] |
| entries_ (defined in ParameterSection) | ParameterSection | [protected] |
| extractSection(ForceFieldParameters ¶meters, const String §ion_name) | CharmmEEF1 | [virtual] |
| extractSection(Parameters ¶meters, const String §ion_name) | CharmmEEF1 | [virtual] |
| format_line_ (defined in ParameterSection) | ParameterSection | [protected] |
| getColumnIndex(const String &variable) const | ParameterSection | |
| getKey(Position key_index) const | ParameterSection | |
| getNumberOfKeys() const | ParameterSection | |
| getNumberOfVariables() const | ParameterSection | |
| getParameters(Atom::Type I) const | CharmmEEF1 | |
| getSectionName() const | ParameterSection | |
| getValue(const String &key, const String &variable) const | ParameterSection | |
| getValue(Position key_index, Position variable_index) const | ParameterSection | |
| has(const String &key, const String &variable) const | ParameterSection | |
| has(const String &key) const | ParameterSection | |
| hasParameters(Atom::Type I) const | CharmmEEF1 | |
| hasVariable(const String &variable) const | ParameterSection | |
| is_defined_ (defined in CharmmEEF1) | CharmmEEF1 | [protected] |
| isValid() const | ParameterSection | [virtual] |
| keys_ (defined in ParameterSection) | ParameterSection | [protected] |
| MAX_FIELDS enum value (defined in ParameterSection) | ParameterSection | |
| number_of_atom_types_ (defined in CharmmEEF1) | CharmmEEF1 | [protected] |
| number_of_variables_ (defined in ParameterSection) | ParameterSection | [protected] |
| operator=(const CharmmEEF1 &charmm_EEF1) | CharmmEEF1 | |
| ParameterSection::operator=(const ParameterSection §ion) | ParameterSection | |
| operator==(const CharmmEEF1 &charmm_EEF1) const | CharmmEEF1 | |
| ParameterSection::operator==(const ParameterSection ¶meter_section) const | ParameterSection | |
| options | ParameterSection | |
| ParameterSection() | ParameterSection | |
| ParameterSection(const ParameterSection ¶meter_section) | ParameterSection | |
| R_min_ (defined in CharmmEEF1) | CharmmEEF1 | [protected] |
| section_entries_ (defined in ParameterSection) | ParameterSection | [protected] |
| section_name_ (defined in ParameterSection) | ParameterSection | [protected] |
| sig_w_ (defined in CharmmEEF1) | CharmmEEF1 | [protected] |
| UNDEFINED | ParameterSection | [static] |
| V_ (defined in CharmmEEF1) | CharmmEEF1 | [protected] |
| valid_ (defined in ParameterSection) | ParameterSection | [protected] |
| variable_names_ (defined in ParameterSection) | ParameterSection | [protected] |
| version_ (defined in ParameterSection) | ParameterSection | [protected] |
| ~CharmmEEF1() | CharmmEEF1 | [virtual] |
| ~ParameterSection() | ParameterSection | [virtual] |