| abort() (defined in DockingAlgorithm) | DockingAlgorithm | [virtual] |
| abort_ (defined in DockingAlgorithm) | DockingAlgorithm | [protected] |
| getConformationSet(Index total_conformations=0) | DockingAlgorithm | [virtual] |
| getProgress() const (defined in DockingAlgorithm) | DockingAlgorithm | [virtual] |
| hasFinished() const (defined in DockingAlgorithm) | DockingAlgorithm | [virtual] |
| options | DockingAlgorithm | |
| pause() (defined in DockingAlgorithm) | DockingAlgorithm | [virtual] |
| pause_ (defined in DockingAlgorithm) | DockingAlgorithm | [protected] |
| proceed() (defined in DockingAlgorithm) | DockingAlgorithm | [virtual] |
| setup(System &system1, System &system2, Options &new_options) | DockingAlgorithm | [virtual] |
| setup(System &system1, System &system2) | DockingAlgorithm | [virtual] |
| start() (defined in DockingAlgorithm) | DockingAlgorithm | [virtual] |
| system1_ (defined in DockingAlgorithm) | DockingAlgorithm | [protected] |
| system2_ (defined in DockingAlgorithm) | DockingAlgorithm | [protected] |
| wasAborted() const (defined in DockingAlgorithm) | DockingAlgorithm | [virtual] |
| wasPaused() const (defined in DockingAlgorithm) | DockingAlgorithm | [virtual] |
| ~DockingAlgorithm() (defined in DockingAlgorithm) | DockingAlgorithm | [virtual] |