, including all inherited members.
| all_small_beers_ | RingPerceptionProcessor | [protected, static] |
| all_small_rings_ | RingPerceptionProcessor | [protected, static] |
| argument_pointer typedef (defined in UnaryFunctor< AtomContainer, Processor::Result >) | UnaryFunctor< AtomContainer, Processor::Result > | |
| argument_reference typedef (defined in UnaryFunctor< AtomContainer, Processor::Result >) | UnaryFunctor< AtomContainer, Processor::Result > | |
| argument_type typedef (defined in UnaryFunctor< AtomContainer, Processor::Result >) | UnaryFunctor< AtomContainer, Processor::Result > | |
| atom_to_tnode_ (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected, static] |
| BalducciPearlmanAlgorithm_(std::vector< std::vector< Atom * > > &sssr, MolecularGraph &graph) (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected] |
| BalducciPearlmanRingSelector_(BitVector bit_vector) (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected, static] |
| BCC_ (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected] |
| bond_to_index_ | RingPerceptionProcessor | [protected, static] |
| calculateSSSR(vector< vector< Atom * > > &sssr, AtomContainer &ac) | RingPerceptionProcessor | |
| checkEdges_(HashSet< Atom * > &ring_set, AtomContainer &ac) (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected] |
| const_argument_pointer typedef (defined in UnaryFunctor< AtomContainer, Processor::Result >) | UnaryFunctor< AtomContainer, Processor::Result > | |
| const_argument_reference typedef (defined in UnaryFunctor< AtomContainer, Processor::Result >) | UnaryFunctor< AtomContainer, Processor::Result > | |
| DFSBCC_(std::vector< MolecularGraph * > &bccs, Size dfbi, HashMap< NodeItem< Index, Index > *, Size > DFBIndex, NodeItem< Index, Index > *v) (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected] |
| FiguerasAlgorithm_(vector< vector< Atom * > > &sssr, AtomContainer &ac) (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected] |
| findAllBCC(std::vector< MolecularGraph * > &bcc, MolecularGraph &graph) | RingPerceptionProcessor | |
| findAllBCC_(std::vector< MolecularGraph * > &bcc, MolecularGraph &graph) (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected] |
| finish() | UnaryProcessor< AtomContainer > | [virtual] |
| forwarded_rings_ | RingPerceptionProcessor | [protected, static] |
| getAllSmallRings() const | RingPerceptionProcessor | |
| getRing_(Atom *n, HashSet< Atom * > &ring_set) (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected] |
| index_to_bond_ (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected, static] |
| matrix_ | RingPerceptionProcessor | [protected, static] |
| operator()(AtomContainer &ac) | RingPerceptionProcessor | [virtual] |
| operator=(const RingPerceptionProcessor &rp) | RingPerceptionProcessor | |
| options (defined in RingPerceptionProcessor) | RingPerceptionProcessor | |
| P_ (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected] |
| parents_ (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected] |
| result_type typedef (defined in UnaryFunctor< AtomContainer, Processor::Result >) | UnaryFunctor< AtomContainer, Processor::Result > | |
| RingPerceptionProcessor() | RingPerceptionProcessor | |
| RingPerceptionProcessor(const RingPerceptionProcessor &rp) | RingPerceptionProcessor | |
| rings_ | RingPerceptionProcessor | [protected, static] |
| setDefaultOptions() | RingPerceptionProcessor | |
| start() | UnaryProcessor< AtomContainer > | [virtual] |
| tested_beers_ | RingPerceptionProcessor | [protected, static] |
| tnode_to_atom_ | RingPerceptionProcessor | [protected, static] |
| UnaryProcessor() | UnaryProcessor< AtomContainer > | |
| UnaryProcessor(const UnaryProcessor &) | UnaryProcessor< AtomContainer > | |
| visited_ (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected] |
| visited_bonds_ (defined in RingPerceptionProcessor) | RingPerceptionProcessor | [protected] |
| ~RingPerceptionProcessor() | RingPerceptionProcessor | [virtual] |
| ~UnaryProcessor() | UnaryProcessor< AtomContainer > | [virtual] |