, including all inherited members.
AddBackboneModel() | BALL::VIEW::AddBackboneModel | |
AddBackboneModel(const AddBackboneModel &add_Backbone_model) | BALL::VIEW::AddBackboneModel | |
argument_pointer typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
argument_reference typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
argument_type typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
assignModelType(ModelPart &part) | BALL::VIEW::AddBackboneModel | [protected, virtual] |
backbone_ | BALL::VIEW::AddBackboneModel | [protected] |
beginNamedProperty() | BALL::PropertyManager | |
calculateGuidePoints_() | BALL::VIEW::AddBackboneModel | [protected, virtual] |
calculateModelParts(Protein &protein) | BALL::VIEW::AddBackboneModel | [protected, virtual] |
calculateRibbonEllipse_(float ribbon_width, float ribbon_height) | BALL::VIEW::AddBackboneModel | [inline, protected] |
calculateRibbonPoints_(Vector3 xn, Vector3 dir, vector< Vector3 > &points) | BALL::VIEW::AddBackboneModel | [inline, protected] |
calculateTubePoints_(Vector3 right, Vector3 dir, vector< Vector3 > &points) | BALL::VIEW::AddBackboneModel | [inline, protected] |
care_for_SS_ | BALL::VIEW::AddBackboneModel | [protected] |
clear() | BALL::VIEW::AddBackboneModel | [virtual] |
clear_() | BALL::VIEW::AddBackboneModel | [protected, virtual] |
clearComposites() | BALL::VIEW::ModelProcessor | [inline, virtual] |
clearProperty(Property property) | BALL::PropertyManager | |
clearProperty(const string &name) | BALL::PropertyManager | |
collectPositions(vector< Residue * > residues) | BALL::VIEW::AddBackboneModel | [protected, virtual] |
const_argument_pointer typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
const_argument_reference typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
countNamedProperties() const | BALL::PropertyManager | |
countProperties() const | BALL::PropertyManager | |
createGeometricObjects() | BALL::VIEW::AddBackboneModel | [virtual] |
createModel_(Position set_pos, Position model_pos) | BALL::VIEW::AddBackboneModel | [protected, virtual] |
createRibbon_(Position set_pos, Position model_pos) | BALL::VIEW::AddBackboneModel | [protected, virtual] |
createTube_(Position set_pos, Position model_pos) | BALL::VIEW::AddBackboneModel | [protected, virtual] |
destroy() | BALL::PropertyManager | [virtual] |
drawing_precision_ | BALL::VIEW::ModelProcessor | [protected] |
dummy_chain_ | BALL::VIEW::AddBackboneModel | [protected] |
dummy_protein_ | BALL::VIEW::AddBackboneModel | [protected] |
dummy_ss_ | BALL::VIEW::AddBackboneModel | [protected] |
dump(std::ostream &s=std::cout, Size depth=0) const | BALL::VIEW::AddBackboneModel | [virtual] |
endNamedProperty() | BALL::PropertyManager | |
evaluateBSpline(const Vector3 &v1, const Vector3 &v2, const Vector3 &v3, float x, Vector3 &result) | BALL::VIEW::AddBackboneModel | [inline, protected] |
finish() | BALL::UnaryProcessor< Composite > | [inline, virtual] |
geometric_objects_ | BALL::VIEW::ModelProcessor | [protected] |
get(PropertyManager &property_manager) const | BALL::PropertyManager | |
getBitVector() | BALL::PropertyManager | |
getBitVector() const | BALL::PropertyManager | |
getDrawingPrecision() const | BALL::VIEW::ModelProcessor | |
getGeometricObjects() | BALL::VIEW::ModelProcessor | [inline] |
getGeometricObjects() const | BALL::VIEW::ModelProcessor | [inline] |
getNamedProperty(Position index) const | BALL::PropertyManager | |
getNamedProperty(Position index) | BALL::PropertyManager | |
getProperty(const string &name) const | BALL::PropertyManager | |
getSurfaceDrawingPrecision() const | BALL::VIEW::ModelProcessor | |
getTubeRadius() const | BALL::VIEW::AddBackboneModel | [inline] |
guide_points_ | BALL::VIEW::AddBackboneModel | [protected] |
hasProperty(Property property) const | BALL::PropertyManager | |
hasProperty(const string &name) const | BALL::PropertyManager | |
interpolate_() | BALL::VIEW::AddBackboneModel | [protected, virtual] |
interpolated_points_ | BALL::VIEW::AddBackboneModel | [protected] |
interpolation_steps_ | BALL::VIEW::AddBackboneModel | [protected] |
isValid() const | BALL::VIEW::ModelProcessor | [inline, virtual] |
last_protein_ | BALL::VIEW::AddBackboneModel | [protected] |
middle_ribbon_ | BALL::VIEW::AddBackboneModel | [protected] |
middle_slide_ | BALL::VIEW::AddBackboneModel | [protected] |
model_parts_ | BALL::VIEW::AddBackboneModel | [protected] |
ModelProcessor() | BALL::VIEW::ModelProcessor | |
ModelProcessor(const ModelProcessor &model_processor) | BALL::VIEW::ModelProcessor | |
ModelTypes enum name | BALL::VIEW::AddBackboneModel | [protected] |
NUCLEIC_ACID enum value | BALL::VIEW::AddBackboneModel | [protected] |
number_of_ribbons_ | BALL::VIEW::AddBackboneModel | [protected] |
offsets_ | BALL::VIEW::AddBackboneModel | [protected] |
operator BitVector &() | BALL::PropertyManager | |
operator!=(const PropertyManager &pm) const | BALL::PropertyManager | |
operator()(Composite &composite) | BALL::VIEW::AddBackboneModel | [virtual] |
operator=(const PropertyManager &property_manager) | BALL::PropertyManager | |
operator==(const PropertyManager &pm) const | BALL::PropertyManager | |
PropertyManager() | BALL::PropertyManager | |
PropertyManager(const PropertyManager &property_manager) | BALL::PropertyManager | |
read(PersistenceManager &pm) | BALL::PropertyManager | |
refineGuidePoints_() | BALL::VIEW::AddBackboneModel | [inline, protected, virtual] |
refineModelParts_() | BALL::VIEW::AddBackboneModel | [protected, virtual] |
residues_to_be_rendered_ | BALL::VIEW::AddBackboneModel | [protected] |
residuesAreConnected_(Residue &residue1, Residue &residue2) | BALL::VIEW::AddBackboneModel | [inline, protected] |
result_type typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
RIBBON enum value | BALL::VIEW::AddBackboneModel | [protected] |
ribbon_height_ | BALL::VIEW::AddBackboneModel | [protected] |
ribbon_mode_ | BALL::VIEW::AddBackboneModel | [protected] |
ribbon_width_ | BALL::VIEW::AddBackboneModel | [protected] |
ribbonModeEnabled() const | BALL::VIEW::AddBackboneModel | [inline] |
set(const PropertyManager &property_manager) | BALL::PropertyManager | |
setDrawingPrecision(Index precision) | BALL::VIEW::ModelProcessor | |
setProperty(Property property) | BALL::PropertyManager | |
setProperty(const NamedProperty &property) | BALL::PropertyManager | |
setProperty(const string &name) | BALL::PropertyManager | |
setProperty(const string &name, bool value) | BALL::PropertyManager | |
setProperty(const string &name, int value) | BALL::PropertyManager | |
setProperty(const string &name, unsigned int value) | BALL::PropertyManager | |
setProperty(const string &name, float value) | BALL::PropertyManager | |
setProperty(const string &name, double value) | BALL::PropertyManager | |
setProperty(const string &name, const string &value) | BALL::PropertyManager | |
setProperty(const string &name, const PersistentObject &value) | BALL::PropertyManager | |
setRibbonMode(bool state) | BALL::VIEW::AddBackboneModel | [inline] |
setSurfaceDrawingPrecision(float precision) | BALL::VIEW::ModelProcessor | |
setTubeRadius(float radius) | BALL::VIEW::AddBackboneModel | [inline] |
slides_ | BALL::VIEW::AddBackboneModel | [protected] |
slides_angle_ | BALL::VIEW::AddBackboneModel | [protected] |
ss_ | BALL::VIEW::AddBackboneModel | [protected] |
start() | BALL::VIEW::AddBackboneModel | [virtual] |
surface_drawing_precision_ | BALL::VIEW::ModelProcessor | [protected] |
swap(PropertyManager &property_manager) | BALL::PropertyManager | |
temp_matrix_ | BALL::VIEW::AddBackboneModel | [protected] |
toggleProperty(Property property) | BALL::PropertyManager | |
TUBE enum value | BALL::VIEW::AddBackboneModel | [protected] |
tube_radius_ | BALL::VIEW::AddBackboneModel | [protected] |
UnaryProcessor() | BALL::UnaryProcessor< Composite > | [inline] |
UnaryProcessor(const UnaryProcessor &) | BALL::UnaryProcessor< Composite > | [inline] |
write(PersistenceManager &pm) const | BALL::PropertyManager | |
xs_ | BALL::VIEW::AddBackboneModel | [protected] |
ys_ | BALL::VIEW::AddBackboneModel | [protected] |
~AddBackboneModel() | BALL::VIEW::AddBackboneModel | [virtual] |
~ModelProcessor() | BALL::VIEW::ModelProcessor | [virtual] |
~PropertyManager() | BALL::PropertyManager | [virtual] |
~UnaryProcessor() | BALL::UnaryProcessor< Composite > | [inline, virtual] |