| addSphere_s_() | BALL::BindingPocketProcessor | private |
| argument_pointer typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| argument_reference typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| argument_type typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| asps_ | BALL::BindingPocketProcessor | private |
| BC_grid_ | BALL::BindingPocketProcessor | private |
| BC_threshold_ | BALL::BindingPocketProcessor | private |
| BindingPocketProcessor() | BALL::BindingPocketProcessor | |
| BindingPocketProcessor(Options &new_options) | BALL::BindingPocketProcessor | |
| BindingPocketProcessor(const BindingPocketProcessor &pp) | BALL::BindingPocketProcessor | |
| c_factor_ | BALL::BindingPocketProcessor | private |
| calculateT_(HashGridBox3< Sphere_ >::DataIterator data_it, HashGridBox3< Sphere_ >::DataIterator data_it2) | BALL::BindingPocketProcessor | private |
| candidates | BALL::BindingPocketProcessor | private |
| candidates_grid_ | BALL::BindingPocketProcessor | private |
| clayer_grid_ | BALL::BindingPocketProcessor | private |
| const_argument_pointer typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| const_argument_reference typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| finish() | BALL::BindingPocketProcessor | virtual |
| found_new_ | BALL::BindingPocketProcessor | private |
| getActiveSitePoints() const | BALL::BindingPocketProcessor | |
| getLayers() const | BALL::BindingPocketProcessor | |
| layer_ | BALL::BindingPocketProcessor | private |
| layer_grid_ | BALL::BindingPocketProcessor | private |
| layers_ | BALL::BindingPocketProcessor | private |
| operator()(Composite &composite) | BALL::BindingPocketProcessor | virtual |
| operator<<(std::ostream &os, const BindingPocketProcessor::Sphere_ &) | BALL::BindingPocketProcessor | friend |
| operator=(const BindingPocketProcessor &pp) | BALL::BindingPocketProcessor | |
| options | BALL::BindingPocketProcessor | |
| parse_() | BALL::BindingPocketProcessor | private |
| protein_clash_rad_ | BALL::BindingPocketProcessor | private |
| protein_grid_ | BALL::BindingPocketProcessor | private |
| pw_grid_ | BALL::BindingPocketProcessor | private |
| radius_(const String &element) | BALL::BindingPocketProcessor | private |
| result_type typedef | BALL::UnaryFunctor< Composite, Processor::Result > | |
| second_it_ | BALL::BindingPocketProcessor | private |
| second_layer_rad_ | BALL::BindingPocketProcessor | private |
| sorted_spheres_ | BALL::BindingPocketProcessor | private |
| sphere_grid_ | BALL::BindingPocketProcessor | private |
| sphere_rad_ | BALL::BindingPocketProcessor | private |
| start() | BALL::UnaryProcessor< Composite > | inlinevirtual |
| testBC_(Sphere_ &sp) | BALL::BindingPocketProcessor | private |
| testFirst_(HashGrid3< Sphere_ > &hg, HashGridBox3< Sphere_ >::DataIterator data_it, Position x, Position y, Position z) | BALL::BindingPocketProcessor | private |
| testProteinClash_(Vector3 &v) | BALL::BindingPocketProcessor | private |
| testSecond_(HashGrid3< Sphere_ > &hg, HashGridBox3< Sphere_ >::DataIterator data_it, HashGridBox3< Sphere_ >::DataIterator data_it2, Position x, Position y, Position z, Position step) | BALL::BindingPocketProcessor | private |
| testSphereClash_(Vector3 &v) | BALL::BindingPocketProcessor | private |
| trySphere__(HashGridBox3< Sphere_ >::DataIterator data_it, HashGridBox3< Sphere_ >::DataIterator data_it2, HashGridBox3< Sphere_ >::DataIterator data_it3) | BALL::BindingPocketProcessor | private |
| UnaryProcessor() | BALL::UnaryProcessor< Composite > | inline |
| UnaryProcessor(const UnaryProcessor &) | BALL::UnaryProcessor< Composite > | inline |
| weedCandidates_() | BALL::BindingPocketProcessor | private |
| ~BindingPocketProcessor() | BALL::BindingPocketProcessor | virtual |
| ~UnaryProcessor() | BALL::UnaryProcessor< Composite > | inlinevirtual |
1.8.3.1