  BALL::Addition< First, Second, DataType > | |
| BALL::AmberFF::Default | |
| BALL::AmberFF::Option | |
| BALL::AmberTorsion::SingleAmberTorsion | |
| BALL::AromaticityProcessor::Default | Default values for options |
| BALL::AromaticityProcessor::Option | Option names |
| BALL::AromaticRingStacking::Default | |
| BALL::AromaticRingStacking::Option | |
| BALL::AssignBondOrderProcessor::Algorithm | |
| BALL::AssignBondOrderProcessor::Default | Default values for options |
| BALL::AssignBondOrderProcessor::Option | Option names |
| BALL::AStarBondOrderStrategy::Default | |
| BALL::AStarBondOrderStrategy::Heuristic | |
| BALL::AStarBondOrderStrategy::Option | Option names |
| BALL::Atom::BondIteratorTraits | |
 BALL::AtomTyper | |
  BALL::MMFF94AtomTyper | |
| BALL::AutoDeletable | |
| BALL::Object | |
| BALL::PersistentObject | |
| BALL::Composite | |
| BALL::Atom | |
| BALL::PDBAtom | |
| BALL::SmilesParser::SPAtom | |
| BALL::AtomContainer | |
| BALL::Chain | |
| BALL::Fragment | |
| BALL::Nucleotide | |
| BALL::Residue | |
| BALL::Molecule | |
| BALL::NucleicAcid | |
| BALL::Protein | |
| BALL::SecondaryStructure | |
| BALL::System | |
 BALL::Bond | |
 BALL::SmilesParser::SPBond | |
| BALL::CrystalInfo | |
| BALL::NamedProperty | |
| BALL::PDBInfo | |
| BALL::PDBRecords | |
| BALL::TVector2< T > | |
| BALL::TVector2< float > | |
| BALL::VIEW::Renderer | |
| BALL::VIEW::BufferedRenderer | |
| BALL::VIEW::GLRenderer | |
| BALL::VIEW::POVRenderer | |
| BALL::VIEW::STLRenderer | |
| BALL::VIEW::TilingRenderer | |
| BALL::VIEW::VRMLRenderer | |
| BALL::VIEW::RepresentationManager | |
| BALL::ResourceEntry | |
| BALL::BALLPlugin | |
| BALL::BaseFilterIterator< Predicate, IteratorBase > | |
| BALL::BaseIterator< Container, DataType, Position, Traits > | |
| BALL::ConstForwardIterator< Container, DataType, Position, Traits > | |
| BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits > | |
| BALL::BidirectionalIterator< Container, DataType, Position, Traits > | Mutable bidirectional iterator |
| BALL::BidirectionalIterator< Container, DataType, Position, Traits > | Mutable bidirectional iterator |
| BALL::ConstRandomAccessIterator< Container, DataType, Position, Traits > | |
| BALL::ConstReverseIterator< Container, DataType, Position, Traits > | |
| BALL::ReverseIterator< Container, DataType, Position, Traits > | |
| BALL::RandomAccessIterator< Container, DataType, Position, Traits > | |
| BALL::RandomAccessIterator< Container, DataType, Position, Traits > | |
| BALL::ConstRandomAccessIterator< Container, DataType, Position, Traits > | |
| BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits > | |
| BALL::ForwardIterator< Container, DataType, Position, Traits > | |
| BALL::ForwardIterator< Container, DataType, Position, Traits > | |
| BALL::ConstForwardIterator< Container, DataType, Position, Traits > | |
| BALL::BinaryFileAdaptor< T > | |
| BALL::BinaryFunctor< FirstArgumentType, SecondArgumentType, ResultType > | |
| BALL::BindingPocketProcessor::Default | |
| BALL::BindingPocketProcessor::Option | |
| BALL::BindingPocketProcessor::Sphere_ | |
| BALL::BindingPocketProcessor::SphereComparator_ | |
| BALL::Bit | |
| BALL::BitVector | |
| BALL::BondOrderAssignmentStrategy | Base class for bond order assignment algorithms |
| BALL::AStarBondOrderStrategy | |
| BALL::KGreedyBondOrderStrategy | |
| BALL::BranchAndBoundBondOrderStrategy | |
| BALL::FPTBondOrderStrategy | |
| BALL::ILPBondOrderStrategy | |
| BALL::BranchAndBoundBondOrderStrategy::Default | |
| BALL::BranchAndBoundBondOrderStrategy::Option | Option names |
| BALL::BuildBondsProcessor::Default | Default values for options |
| BALL::BuildBondsProcessor::Option | Option names |
| BALL::BuriedPolar::Default | |
| BALL::BuriedPolar::Option | |
| BALL::CanonicalMD::AuxFactors | Helper class containing auxiliary factors |
| BALL::CharmmEEF1::Data | |
| BALL::CharmmEEF1::Values | |
| BALL::CharmmFF::Default | |
| BALL::CharmmFF::Option | |
| BALL::CharmmTorsion::SingleCharmmTorsion | |
| BALL::CHPI::AromaticRing | |
| BALL::CHPI::CHGroup | |
| BALL::CHPI::Default | |
| BALL::CHPI::Option | |
| BALL::CIFFile::Datablock | |
| BALL::CIFFile::Datacontent | |
| BALL::CIFFile::Item | |
| BALL::CIFFile::SaveFrame | |
| BALL::CIFFile::State | |
| BALL::Client | |
| BALL::ColumnIteratorTraits< valuetype, mtraits > | |
| BALL::Comparator< T > | |
| BALL::Composite::AncestorIteratorTraits | |
| BALL::Composite::ChildCompositeIteratorTraits | |
| BALL::Composite::CompositeIteratorTraits | |
| BALL::CompositeIteratorTraits | |
| BALL::AtomContainerIteratorTraits | |
| BALL::AtomIteratorTraits | |
| BALL::ChainIteratorTraits | |
| BALL::FragmentIteratorTraits | |
| BALL::MoleculeIteratorTraits | |
| BALL::NucleicAcidIteratorTraits | |
| BALL::NucleotideIteratorTraits | |
| BALL::PDBAtomIteratorTraits | |
| BALL::ProteinIteratorTraits | |
| BALL::ResidueIteratorTraits | |
| BALL::SecondaryStructureIteratorTraits | |
| BALL::ConformationSet | |
| BALL::ConjugateGradientMinimizer::Default | |
| BALL::ConjugateGradientMinimizer::Option | |
| BALL::ConnectedToPredicate::CTPNode | |
| BALL::Constant | |
| BALL::ConstantFunction< constant_template > | |
| BALL::CosineTorsion::Data | |
| BALL::CosineTorsion::SingleData | |
| BALL::CosineTorsion::SingleValues | |
| BALL::CosineTorsion::Values | |
| BALL::CrystalGenerator | |
| BALL::CrystalInfo::Default | |
| BALL::CrystalInfo::Option | |
| BALL::CubicFunction< Function, DataType > | |
| BALL::CubicSpline1D | |
| BALL::CubicSpline2D | |
| BALL::DiagonalIteratorTraits< valuetype, mtraits > | |
| BALL::Directory | |
| BALL::Division< First, Second, DataType > | |
| BALL::DockingAlgorithm | |
| BALL::GeometricFit | |
| BALL::DockResult | |
| BALL::DockResult::Compare_ | |
| BALL::DockResult::Scoring_ | |
| BALL::DoubleTraits | |
| BALL::EdgeItem< Node, Edge > | |
| BALL::EigenSolver< valuetype, mtraits > | |
| BALL::ElectrostaticPotentialCalculator | |
| BALL::ElectrostaticPotentialCalculator::Default | |
| BALL::ElectrostaticPotentialCalculator::Option | |
| BALL::Element | |
| BALL::ElementColumnIteratorTraits< valuetype, mtraits > | |
| BALL::ElementRowIteratorTraits< valuetype, mtraits > | |
| BALL::Embeddable | |
| BALL::Peptides::NameConverter | This class provides conversion of atom names between naming schemata |
| BALL::VIEW::DatasetController | |
| BALL::VIEW::DockResultController | |
| BALL::VIEW::RaytraceableGridController | |
| BALL::VIEW::RegularData3DController | |
| BALL::VIEW::TrajectoryController | |
| BALL::VIEW::VectorGridController | |
| BALL::VIEW::MainControl | |
| BALL::Mainframe | |
| BALL::VIEW::ModularWidget | |
| BALL::VIEW::AssignBondOrderConfigurationDialog | |
| BALL::VIEW::AssignBondOrderResultsDialog | |
| BALL::VIEW::DemoTutorialDialog | |
| BALL::VIEW::DisplayProperties | |
| BALL::VIEW::DockingController | |
| BALL::VIEW::DockWidget | |
| BALL::VIEW::DockableRegularData1DWidget | |
| BALL::VIEW::DockableRegularData2DWidget | |
| BALL::VIEW::EditFunctions | |
| BALL::VIEW::FileObserver | |
| BALL::VIEW::GenericControl | |
| BALL::VIEW::DatasetControl | |
| BALL::VIEW::GeometricControl | |
| BALL::VIEW::MolecularControl | |
| BALL::VIEW::HelpViewer | |
| BALL::VIEW::LogView | |
| BALL::VIEW::PyWidget | |
| BALL::VIEW::DownloadElectronDensity | |
| BALL::VIEW::DownloadPDBFile | |
| BALL::VIEW::EditOperationDialog | |
| BALL::VIEW::FDPBDialog | |
| BALL::VIEW::LabelDialog | |
| BALL::VIEW::ModifyRepresentationDialog | |
| BALL::VIEW::MolecularFileDialog | |
| BALL::VIEW::MolecularStructure | |
| BALL::VIEW::OpenBruker1DFile | |
| BALL::VIEW::OpenBruker2DFile | |
| BALL::VIEW::PluginDialog | |
| BALL::VIEW::PubChemDialog | |
| BALL::VIEW::RaytraceableContourSurfaceDialog | |
| BALL::VIEW::RegularData1DWidget | |
| BALL::VIEW::RegularData2DWidget | |
| BALL::VIEW::Scene | |
| BALL::VIEW::EditableScene | |
| BALL::VIEW::ServerWidget | |
| BALL::VIEW::ShortcutDialog | |
| BALL::VIEW::SnapshotVisualisationDialog | |
| BALL::VIEW::StereoSettingsDialog | |
| BALL::VIEW::TestFramework | |
| BALL::VIEW::UndoManagerDialog | |
| BALL::VIEW::ShortcutRegistry | |
| BALL::EmpiricalHSShiftProcessor::Default | Default values for options |
| BALL::EmpiricalHSShiftProcessor::Option | Option names |
| BALL::EmpiricalHSShiftProcessor::PropertiesForShift_ | |
| BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_ | |
| BALL::EnergeticEvaluation | |
| BALL::ForceFieldEvaluation | |
| BALL::AmberEvaluation | |
| BALL::RandomEvaluation | |
| BALL::EnergyMinimizer | |
| BALL::ConjugateGradientMinimizer | |
| BALL::ShiftedLVMMMinimizer | |
| BALL::SteepestDescentMinimizer | |
| BALL::StrangLBFGSMinimizer | |
| BALL::EnergyMinimizer::Default | |
| BALL::EnergyMinimizer::Option | |
| BALL::Enumerator< Container, SiteIterator, Variant > | |
| BALL::Enumerator< Container, SiteIterator, Variant >::IteratorTraits_ | |
| BALL::Exception::GlobalExceptionHandler | |
| BALL::Expression | |
| BALL::ExpressionParser | |
| BALL::ExpressionParser::State | |
| BALL::ExpressionParser::SyntaxTree | |
| BALL::ExpressionTree | |
| BALL::Factory< T > | |
| BALL::FDPB | |
| BALL::FDPB::Boundary | |
| BALL::FDPB::ChargeDistribution | |
| BALL::FDPB::Default | |
| BALL::FDPB::DielectricSmoothing | |
| BALL::FDPB::FastAtomStruct | |
| BALL::FDPB::Option | |
| BALL::FileSystem | |
| BALL::FloatTraits | |
| BALL::ForceField | |
| BALL::AmberFF | |
| BALL::CharmmFF | |
| BALL::MMFF94 | |
| BALL::ForceFieldComponent | |
| BALL::AmberNonBonded | |
| BALL::AmberTorsion | |
| BALL::BendComponent | |
| BALL::AmberBend | |
| BALL::CharmmBend | |
| BALL::CharmmImproperTorsion | |
| BALL::CharmmNonBonded | |
| BALL::CharmmTorsion | |
| BALL::ChemScoreMetal | |
| BALL::MMFF94NonBonded | |
| BALL::MMFF94OutOfPlaneBend | |
| BALL::MMFF94StretchBend | |
| BALL::MMFF94Torsion | |
| BALL::StretchComponent | |
| BALL::AmberStretch | |
| BALL::CharmmStretch | |
| BALL::FPTBondOrderStrategy::AdditionalBagProperties_ | |
| BALL::FPTBondOrderStrategy::Assignment_ | |
| BALL::FPTBondOrderStrategy::BackTrackingState_ | |
| BALL::FPTBondOrderStrategy::ComputingData_ | |
| BALL::FPTBondOrderStrategy::Default | Default option values |
| BALL::FPTBondOrderStrategy::DPBackTracking_ | |
| BALL::FPTBondOrderStrategy::DPBackTracking_::StateComparator_ | |
| BALL::FPTBondOrderStrategy::DPBackTrackingCombiner_ | |
| BALL::FPTBondOrderStrategy::DPConfig_ | |
| BALL::FPTBondOrderStrategy::DPJoinMapComparator_ | |
| BALL::FPTBondOrderStrategy::DPTable_ | |
| BALL::FPTBondOrderStrategy::EdgeComparator_ | |
| BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_ | |
| BALL::FPTBondOrderStrategy::Option | Option names |
| BALL::FragmentDB | |
| BALL::FragmentDB::BuildBondsProcessor::Connection | |
| BALL::GAFFCESParser | |
| BALL::GAFFCESParser::APSMatcher | |
| BALL::GAFFCESParser::APSMatcher::APSTerm | |
| BALL::GAFFCESParser::CESPredicate | |
| BALL::GAFFCESParser::CESelementConnectionPredicate | |
| BALL::GAFFCESParser::CESelementPredicate | |
| BALL::GAFFCESParser::CESwildcardsConnectionPredicate | |
| BALL::GAFFCESParser::CESwildcardsPredicate | |
| BALL::GAFFCESParser::TruePredicate | |
| BALL::GAFFCESParser::State | |
| BALL::GAFFTypeProcessor::Default | |
| BALL::GAFFTypeProcessor::Option | |
| BALL::GAFFTypeProcessor::TypeDefinition | Nested class definitions |
| BALL::GAMESSDatFile::block | |
| BALL::GAMESSDatFile::State | |
| BALL::GAMESSLogFile::State | |
| BALL::GeneralizedBornModel | |
| BALL::GeneralizedBornModel::Default | |
| BALL::GeneralizedBornModel::Option | |
| BALL::GeometricFit::Default | |
| BALL::GeometricFit::Option | |
| BALL::GeometricFit::Peak_ | |
| BALL::GeometricFit::RotationAngles_ | |
| BALL::GlobalInitializer | |
| BALL::GRAPH::EditableEdgeCopier< Graph1, Graph2 > | |
| BALL::GRAPH::EditableVertexCopier< Graph1, Graph2 > | |
| BALL::GRAPH::GraphTraits< Graph > | |
| BALL::GRAPH::PostOrderFolding< Tree, From, To, Functor > | |
| BALL::GRAPH::UndoEliminateOperation< UndirectedGraph > | |
| BALL::GraphEdge< Vertex, Edge, Face > | |
| BALL::GraphFace< Vertex, Edge, Face > | |
| BALL::GraphTriangle< Vertex, Edge, Face > | |
| BALL::GraphVertex< Vertex, Edge, Face > | |
| BALL::HashGrid3< Item > | |
| BALL::HashGrid3< Item >::BoxIteratorTraits | |
| BALL::HashGridBox3< Item > | |
| BALL::HashGridBox3< Item >::BoxIteratorTraits | |
| BALL::HashGridBox3< Item >::DataIteratorTraits | |
| BALL::HashSet< Key > | |
| BALL::HashSet< Key >::IteratorTraits | |
| BALL::HashSet< Key >::Node | |
| BALL::HBondProcessor::Default | Default values for options |
| BALL::HBondProcessor::HBond | |
| BALL::HBondProcessor::Option | Option names |
| BALL::HBondProcessor::PredictionMethod | Default values for options |
| BALL::HBondProcessor::ResidueData | |
| BALL::HybridisationProcessor::AtomNames_ | |
| BALL::HybridisationProcessor::Default | Default values for options |
| BALL::HybridisationProcessor::Elements_ | |
| BALL::HybridisationProcessor::Method | |
| BALL::HybridisationProcessor::Option | Option names |
| BALL::HydrogenBond::Default | |
| BALL::HydrogenBond::Option | |
| BALL::INIFile | |
| BALL::INIFile::IteratorTraits_ | Interface for the LineIterator |
| BALL::INIFile::Section | |
| BALL::JCAMPFile::JCAMPValue | |
| BALL::JohnsonBoveyShiftProcessor::Ring | |
| BALL::Kekuliser | |
| BALL::Kekuliser::AtomInfo | |
| BALL::KGreedyBondOrderStrategy::Default | |
| BALL::KGreedyBondOrderStrategy::Option | Option names |
| BALL::LennardJones::Data | |
| BALL::LennardJones::Values | |
| BALL::Limits< T > | |
| BALL::Limits< bool > | |
| BALL::Limits< char > | |
| BALL::Limits< double > | |
| BALL::Limits< float > | |
| BALL::Limits< int > | |
| BALL::Limits< long > | |
| BALL::Limits< short > | |
| BALL::Limits< signed char > | |
| BALL::Limits< unsigned char > | |
| BALL::Limits< unsigned int > | |
| BALL::Limits< unsigned long > | |
| BALL::Limits< unsigned short > | |
| BALL::LineSearch | |
| BALL::Lipophilic::Default | |
| BALL::Lipophilic::Option | |
| BALL::LogStreamBuf::LoglineStruct | |
| BALL::LogStreamBuf::StreamStruct | |
| BALL::LogStreamNotifier | |
| BALL::VIEW::LogView | |
| BALL::LongDoubleTraits | |
| BALL::LowerTriangularTraits | |
| BALL::Matrix< valuetype, mtraits > | |
| BALL::MatrixInverter< valuetype, mtraits > | |
| BALL::MicroCanonicalMD::AuxFactors | |
| BALL::MMFF94::Default | |
| BALL::MMFF94::Option | |
| BALL::MMFF94AtomType | Class to store the values of an atom type from MMFFPROP.PAR |
| BALL::MMFF94AtomTyper::AromaticType | |
| BALL::MMFF94NonBonded::NonBondedPairData | |
| BALL::MMFF94OutOfPlaneBend::OutOfPlaneBend | |
| BALL::MMFF94ParametersBase | |
| BALL::MMFF94AtomTypeEquivalences | |
| BALL::MMFF94AtomTypes | |
| BALL::MMFF94BendParameters | |
| BALL::MMFF94ESParameters | |
| BALL::MMFF94PlaneParameters | |
| BALL::MMFF94StretchBendParameters | |
| BALL::MMFF94StretchParameters | |
| BALL::MMFF94TorsionParameters | |
| BALL::MMFF94VDWParameters | |
| BALL::MMFF94StretchBend::Bend | See MMFFANG.PAR |
| BALL::MMFF94StretchBend::Stretch | |
| BALL::MMFF94StretchBend::StretchBend | |
| BALL::MMFF94StretchParameters::BondData | |
| BALL::MMFF94StretchParameters::EmpiricalBondData | |
| BALL::MMFF94Torsion::Torsion | See MMFFTOR.PAR |
| BALL::MMFF94VDWParameters::VDWEntry | |
| BALL::MOL2File::AtomStruct | |
| BALL::MOL2File::BondStruct | |
| BALL::MOL2File::CommentStruct | |
| BALL::MOL2File::MoleculeStruct | |
| BALL::MOL2File::SetStruct | A class used for storing TRIPOS sets |
| BALL::MOL2File::SubstructureStruct | |
| BALL::MolecularDynamics | |
| BALL::CanonicalMD | |
| BALL::MicroCanonicalMD | |
| BALL::MolecularDynamics::Default | |
| BALL::MolecularDynamics::Option | |
| BALL::MOLFile::AtomStruct | |
| BALL::MOLFile::BondStruct | |
| BALL::MOLFile::CountsStruct | |
| BALL::MOLFile::Property | |
| BALL::MolFileFactory | |
| BALL::MPISupport | |
| BALL::MutableConstant< DataType > | |
| BALL::MutablePower< Function, DataType > | |
| BALL::Mutator | |
| BALL::DNAMutator | |
| BALL::NMRStarFile::BALLToBMRBMapper | |
| BALL::NMRStarFile::EntryInformation | |
| BALL::NMRStarFile::MolecularSystem | |
| BALL::NMRStarFile::MolecularSystem::ChemicalUnit | |
| BALL::NMRStarFile::MolecularSystem::RelatedDB | |
| BALL::NMRStarFile::MonomericPolymer | |
| BALL::NMRStarFile::MonomericPolymer::HomologDB | Database with homolog entries |
| BALL::NMRStarFile::NMRAtomData | |
| BALL::NMRStarFile::NMRAtomDataSet | |
| BALL::NMRStarFile::NMRSpectrometer | |
| BALL::NMRStarFile::Sample | |
| BALL::NMRStarFile::Sample::Component | |
| BALL::NMRStarFile::SampleCondition | |
| BALL::NMRStarFile::ShiftReferenceElement | |
| BALL::NMRStarFile::ShiftReferenceSet | |
| BALL::NodeItem< Node, Edge > | |
| BALL::NonpolarSolvation::Default | |
| BALL::NonpolarSolvation::Option | |
| BALL::NucleotideMapping | |
| BALL::NumericalIntegrator< Function, DataType > | |
| BALL::RombergIntegrator< Function, DataType > | |
| BALL::NumericalSAS | |
| BALL::NumericalSAS::Default | |
| BALL::NumericalSAS::Option | |
| BALL::ObjectCreator | |
| BALL::MoleculeObjectCreator | |
| BALL::Pair6_12InteractionEnergyProcessor::Default | |
| BALL::Pair6_12InteractionEnergyProcessor::Option | |
| BALL::Pair6_12RDFIntegrator::Default | |
| BALL::Pair6_12RDFIntegrator::Option | |
| BALL::PairExpInteractionEnergyProcessor::Default | |
| BALL::PairExpInteractionEnergyProcessor::Option | |
| BALL::PairExpRDFIntegrator::Default | |
| BALL::PairExpRDFIntegrator::Option | |
| BALL::Parameters | |
| BALL::ForceFieldParameters | |
| BALL::ParameterSection | |
| BALL::AtomTypes | |
| BALL::CharmmEEF1 | |
| BALL::ClaverieParameter | |
| BALL::CosineTorsion | |
| BALL::GeneralizedBornModel::GBParameters | |
| BALL::LennardJones | |
| BALL::Potential1210 | |
| BALL::QuadraticAngleBend | |
| BALL::QuadraticBondStretch | |
| BALL::QuadraticImproperTorsion | |
| BALL::RDFParameter | |
| BALL::RDFSection | |
| BALL::ResidueTorsions | |
| BALL::SolventParameter | |
| BALL::Templates | |
| BALL::PartialBondOrderAssignment | A full or partial solution to the AStar-based bond order assignment problem |
| BALL::BondOrderAssignment | A solution to the bond order assignment problem |
| BALL::Path | |
| BALL::PCMCavFreeEnergyProcessor::Default | |
| BALL::PCMCavFreeEnergyProcessor::Option | |
| BALL::PDB::AdditionalAtomInfo | |
| BALL::PDB::BookKeeping | |
| BALL::PDB::RecordANISOU | |
| BALL::PDB::RecordATOM | |
| BALL::PDB::RecordAUTHOR | |
| BALL::PDB::RecordCAVEAT | |
| BALL::PDB::RecordCISPEP | |
| BALL::PDB::RecordCOMPND | |
| BALL::PDB::RecordCON06 | |
| BALL::PDB::RecordCON061 | |
| BALL::PDB::RecordCON062 | |
| BALL::PDB::RecordCON063 | |
| BALL::PDB::RecordCON064 | |
| BALL::PDB::RecordCONECT | |
| BALL::PDB::RecordCRYST1 | |
| BALL::PDB::RecordCRYST1::UnitCell | |
| BALL::PDB::RecordDBREF | |
| BALL::PDB::RecordDBREF::EndingDatabaseSegment | |
| BALL::PDB::RecordDBREF::EndingSequence | |
| BALL::PDB::RecordDBREF::InitialDatabaseSegment | |
| BALL::PDB::RecordDBREF::InitialSequence | |
| BALL::PDB::RecordEND | |
| BALL::PDB::RecordENDMDL | |
| BALL::PDB::RecordEXPDTA | |
| BALL::PDB::RecordFORMUL | |
| BALL::PDB::RecordFTNOTE | |
| BALL::PDB::RecordHEADER | |
| BALL::PDB::RecordHELIX | |
| BALL::PDB::RecordHET | |
| BALL::PDB::RecordHETATM | |
| BALL::PDB::RecordHETNAM | |
| BALL::PDB::RecordHETSYN | |
| BALL::PDB::RecordHYDBND | |
| BALL::PDB::RecordHYDBND::HydrogenAtom | |
| BALL::PDB::RecordHYDBND::HydrogenPartnerAtom | |
| BALL::PDB::RecordJRNL | |
| BALL::PDB::RecordKEYWDS | |
| BALL::PDB::RecordLINK | |
| BALL::PDB::RecordLINK::LinkPartner | |
| BALL::PDB::RecordMASTER | |
| BALL::PDB::RecordMODEL | |
| BALL::PDB::RecordMODRES | |
| BALL::PDB::RecordMTRIX1 | |
| BALL::PDB::RecordMTRIX2 | |
| BALL::PDB::RecordMTRIX3 | |
| BALL::PDB::RecordOBSLTE | |
| BALL::PDB::RecordORIGX1 | |
| BALL::PDB::RecordORIGX2 | |
| BALL::PDB::RecordORIGX3 | |
| BALL::PDB::RecordREMARK | |
| BALL::PDB::RecordREVDAT | |
| BALL::PDB::RecordSCALE1 | |
| BALL::PDB::RecordSCALE2 | |
| BALL::PDB::RecordSCALE3 | |
| BALL::PDB::RecordSEQADV | |
| BALL::PDB::RecordSEQRES | |
| BALL::PDB::RecordSHEET | |
| BALL::PDB::RecordSIGATM | |
| BALL::PDB::RecordSIGUIJ | |
| BALL::PDB::RecordSITE | |
| BALL::PDB::RecordSLTBRG | |
| BALL::PDB::RecordSLTBRG::PartnerAtom | |
| BALL::PDB::RecordSOURCE | |
| BALL::PDB::RecordSPRSDE | |
| BALL::PDB::RecordSSBOND | |
| BALL::PDB::RecordTER | |
| BALL::PDB::RecordTITLE | |
| BALL::PDB::RecordTURN | |
| BALL::PDB::RecordTVECT | |
| BALL::PDB::RecordTypeFormat | |
| BALL::PDB::RecordUNKNOWN | |
| BALL::PDB::Residue | |
| BALL::PDB::Structure | |
| BALL::PDB::Structure::AtomEntry | |
| BALL::PDB::Structure::ConectAtomList | |
| BALL::PDB::Structure::NCSMatrix | |
| BALL::PDB::Structure::UnitCellInfo | |
| BALL::PDBFile::Default | |
| BALL::PDBFile::Option | |
| BALL::Peptides::AminoAcidDescriptor | |
| BALL::Peptides::NameConverter::Default | Default values for options |
| BALL::Peptides::NameConverter::Option | Option names |
| BALL::Peptides::PeptideBuilder | |
| BALL::VIEW::PeptideDialog | |
| BALL::PeriodicBoundary | |
| BALL::PeriodicBoundary::Default | Default values |
| BALL::PeriodicBoundary::Option | |
| BALL::PersistenceManager | |
| BALL::TextPersistenceManager | |
| BALL::XDRPersistenceManager | |
| BALL::PiecewiseFunction | |
| BALL::PiecewisePolynomial | |
| BALL::PierottiCavFreeEnergyProcessor::Default | |
| BALL::PierottiCavFreeEnergyProcessor::Option | |
| BALL::PluginHandler | |
| BALL::VIEW::InputDevPluginHandler | |
| BALL::PolarSolvation::Default | |
| BALL::PolarSolvation::Option | |
| BALL::Potential1210::Data | |
| BALL::Potential1210::Values | |
| BALL::PreciseTime | |
| BALL::Processor | |
| BALL::Product< First, Second, DataType > | |
| BALL::PropertyManager | |
| BALL::Atom | |
| BALL::AtomContainer | |
| BALL::Bond | |
| BALL::PDBFile | |
| BALL::Peak< PositionType > | |
| BALL::RingAnalyser::Ring | |
| BALL::VIEW::ModelProcessor | |
| BALL::VIEW::AddBackboneModel | |
| BALL::VIEW::AddCartoonModel | |
| BALL::VIEW::AddSurfaceModel | |
| BALL::VIEW::AtomBondModelBaseProcessor | |
| BALL::VIEW::AddBallAndStickModel | |
| BALL::VIEW::AddLineModel | |
| BALL::VIEW::AddVanDerWaalsModel | |
| BALL::VIEW::HBondModelProcessor | |
| BALL::VIEW::ForceModel | |
| BALL::VIEW::LabelModel | |
| BALL::VIEW::Representation | |
| BALL::Peak< float > | |
| BALL::PTE_ | |
| BALL::PTE_::SymbolToElement | |
| BALL::PubChemDownloader | Downloads PubChem entries |
| BALL::PyInterpreter | |
| BALL::QSAR::AutomaticModelCreator | |
| BALL::QSAR::ConfigIO | |
| BALL::QSAR::FeatureSelection | |
| BALL::QSAR::FeatureSelectionConfiguration | |
| BALL::QSAR::InputConfiguration | |
| BALL::QSAR::InputPartitioningConfiguration | |
| BALL::QSAR::Kernel | |
| BALL::QSAR::LatentVariableModel | |
| BALL::QSAR::KPCRModel | |
| BALL::QSAR::KPLSModel | |
| BALL::QSAR::PCRModel | |
| BALL::QSAR::PLSModel | |
| BALL::QSAR::OPLSModel | |
| BALL::QSAR::LibsvmModel::svm_model | |
| BALL::QSAR::Model | |
| BALL::QSAR::ClassificationModel | |
| BALL::QSAR::BayesModel | |
| BALL::QSAR::NBModel | |
| BALL::QSAR::SNBModel | |
| BALL::QSAR::LDAModel | |
| BALL::QSAR::LogitModel | |
| BALL::QSAR::SVMModel | |
| BALL::QSAR::RegressionModel | |
| BALL::QSAR::LinearModel | |
| BALL::QSAR::MLRModel | |
| BALL::QSAR::RRModel | |
| BALL::QSAR::PCRModel | |
| BALL::QSAR::PLSModel | |
| BALL::QSAR::NonLinearModel | |
| BALL::QSAR::ALLModel | |
| BALL::QSAR::KNNModel | |
| BALL::QSAR::FitModel | |
| BALL::QSAR::KernelModel | |
| BALL::QSAR::GPModel | |
| BALL::QSAR::KPCRModel | |
| BALL::QSAR::KPLSModel | |
| BALL::QSAR::SVRModel | |
| BALL::QSAR::LibsvmModel | |
| BALL::QSAR::ModelConfiguration | |
| BALL::QSAR::ModelFactory< T > | |
| BALL::QSAR::PredictionConfiguration | |
| BALL::QSAR::QSARData | |
| BALL::QSAR::Registry | |
| BALL::QSAR::RegistryEntry | |
| BALL::QSAR::RegressionValidation::BackupData | |
| BALL::QSAR::Statistics | |
| BALL::QSAR::Validation | |
| BALL::QSAR::ClassificationValidation | |
| BALL::QSAR::RegressionValidation | |
| BALL::QSAR::ValidationConfiguration | |
| BALL::QuadraticAngleBend::Data | |
| BALL::QuadraticAngleBend::Values | |
| BALL::QuadraticBondStretch::Data | |
| BALL::QuadraticBondStretch::Values | |
| BALL::QuadraticImproperTorsion::Data | |
| BALL::QuadraticImproperTorsion::Values | |
| BALL::Quadruple< T1, T2, T3, T4 > | |
| BALL::RadialDistributionFunction | |
| BALL::RandomNumberGenerator | |
| BALL::RDFIntegrator | |
| BALL::Pair6_12RDFIntegrator | |
| BALL::PairExpRDFIntegrator | |
| BALL::Reciprocal< Function, DataType > | |
| BALL::ReducedSurface | |
| BALL::RegularExpression | |
| BALL::ReissCavFreeEnergyProcessor::Default | |
| BALL::ReissCavFreeEnergyProcessor::Option | |
| BALL::ResidueRotamerSet | |
| BALL::ResidueTorsions::Data | |
| BALL::ResourceEntry::IteratorTraits_ | |
| BALL::RingFinder | |
| BALL::RingPerceptionProcessor::Default | Default options for the ring perception |
| BALL::RingPerceptionProcessor::Option | Option names |
| BALL::RingPerceptionProcessor::PathMessage_ | |
| BALL::RingPerceptionProcessor::TNode_ | |
| BALL::RMSDMinimizer | |
| BALL::Rotamer | |
| BALL::RotamerLibrary | Rotamer Library Class |
| BALL::RotationalEntropyLoss::Default | |
| BALL::RotationalEntropyLoss::Option | |
| BALL::RowIteratorTraits< valuetype, mtraits > | |
| BALL::RSComputer | |
| BALL::RSComputer::ProbePosition | |
| BALL::RuleEvaluator | |
| BALL::SASTriangulator | |
| BALL::ScoringBaseFunction | |
| BALL::FermiBaseFunction | |
| BALL::LinearBaseFunction | |
| BALL::ScoringComponent | |
| BALL::AromaticRingStacking | |
| BALL::BuriedPolar | |
| BALL::CHPI | |
| BALL::HydrogenBond | |
| BALL::Lipophilic | |
| BALL::NonpolarSolvation | |
| BALL::PolarSolvation | |
| BALL::RotationalEntropyLoss | |
| BALL::VanDerWaals | |
| BALL::ScoringFunction | |
| BALL::SLICKEnergy | |
| BALL::SLICKScore | |
| BALL::ScoringFunction::Default | |
| BALL::ScoringFunction::Option | |
| BALL::ScoringTypes | |
| BALL::FresnoTypes | |
| BALL::SDGenerator | |
| BALL::SDGenerator::AtomComparator | |
| BALL::SDGenerator::Default | Default values for options |
| BALL::SDGenerator::Option | Option names |
| BALL::Selectable | |
| BALL::Composite | |
| BALL::SESComputer | |
| BALL::SESSingularityCleaner | |
| BALL::SESSingularityCleaner::ProbeIntersection | |
| BALL::SESTriangulator | |
| BALL::ShiftedLVMMMinimizer::Default | |
| BALL::ShiftedLVMMMinimizer::Option | |
| BALL::SideChainPlacementProcessor::Default | Default values for options |
| BALL::SideChainPlacementProcessor::Method | |
| BALL::SideChainPlacementProcessor::Option | Option names |
| BALL::SLICKEnergy::Default | |
| BALL::SLICKEnergy::Option | |
| BALL::SLICKScore::Default | |
| BALL::SLICKScore::Option | |
| BALL::SmartsMatcher | |
| BALL::SmartsMatcher::RecStruct_ | Wrapper class which is used as an interface in the matching code to the pool |
| BALL::SmartsMatcher::RecStructCore_ | Core structure of the recursive matching algorithm for the object pool |
| BALL::SmartsMatcher::RecStructPool_ | Class which does the pool operations of the RecStructCore_ pool |
| BALL::SmartsParser | |
| BALL::SmartsParser::SPAtom | Smarts Parser Atom class |
| BALL::SmartsParser::SPAtom::Property | Property struct of smarts parser atom |
| BALL::SmartsParser::SPAtom::PropertyValue | Possible types of the properties |
| BALL::SmartsParser::SPBond | Bond representation of the smarts parser |
| BALL::SmartsParser::SPEdge | Edge representation of the smarts parser graph |
| BALL::SmartsParser::SPNode | Representation of a node in the smarts parser graph |
| BALL::SmartsParser::State | Parser state (used by the parser itself) |
| BALL::SmilesParser | |
| BALL::SmilesParser::State | |
| BALL::SnapShot | |
| BALL::SnapShotManager | |
| BALL::SnapShotManager::Default | Local class for handling default values for the options |
| BALL::SnapShotManager::Option | Local class for handling options |
| BALL::SolventAccessibleSurface | |
| BALL::SolventAtomDescriptor | |
| BALL::SolventDescriptor | |
| BALL::SolventExcludedSurface | |
| BALL::SortedPosition2 | |
| BALL::SortedPosition3 | |
| BALL::Spectrum< DataT, PeakT, PositionT > | |
| BALL::SquareFunction< Function, DataType > | |
| BALL::StandardTraits | |
| BALL::StrangLBFGSMinimizer::Default | |
| BALL::StrangLBFGSMinimizer::Option | |
| BALL::Substring | |
| BALL::Subtraction< First, Second, DataType > | |
| BALL::SVDSolver< valuetype, mtraits > | |
| BALL::SymmetricTraits | |
| BALL::TAngle< T > | |
| BALL::TBox3< T > | |
| BALL::VIEW::Box | |
| BALL::TCircle3< T > | |
| BALL::VIEW::Disc | |
| BALL::TContour< T > | |
| BALL::TContourLine< T > | |
| BALL::TContourSurface< T >::Cube | |
| BALL::TCPServer | |
| BALL::TCPServerThread | |
| BALL::VIEW::ServerWidget::BALLViewServer | |
| BALL::Timer | |
| BALL::TimeStamp | |
| BALL::TLine3< T > | |
| BALL::TMatrix4x4< T > | Default Type |
| BALL::TPlane3< T > | |
| BALL::TrajectoryFileFactory | |
| BALL::TransformationManager | |
| BALL::TreeWidth< UndirectedGraph > | |
| BALL::TreeWidth< UndirectedGraph >::BagContentWriter | |
| BALL::TreeWidth< UndirectedGraph >::ComponentFilter_< ComponentMap > | |
| BALL::TreeWidthImplementation< EditableGraph > | |
| BALL::TreeWidthImplementation< EditableGraph >::FillInHeuristic | |
| BALL::TreeWidthImplementation< EditableGraph >::MinorMinWidthCriterion | |
| BALL::TreeWidthImplementation< EditableGraph >::MinorMinWidthReducer | |
| BALL::TreeWidthImplementation< EditableGraph >::QuickBB< Lowerbound, Upperbound > | |
| BALL::TreeWidthImplementation< EditableGraph >::QuickBB< Lowerbound, Upperbound >::QuickBBState | |
| BALL::TreeWidthImplementation< EditableGraph >::TreeDecompositionBuilder< OriginalGraphType > | |
| BALL::TRegularData1D< ValueType > | |
| BALL::TRegularData1D< ValueType >::BlockValueType | The block data type for reading and writing binary data |
| BALL::TRegularData2D< ValueType > | |
| BALL::TRegularData2D< ValueType >::BlockValueType | The block data type for reading and writing binary data |
| BALL::TRegularData2D< ValueType >::IndexType | The index type used to refer to a specific element in the grid (x-, and y-index) |
| BALL::TRegularData3D< ValueType > | |
| BALL::TRegularData3D< ValueType >::BlockValueType | The block data type for reading and writing binary data |
| BALL::TRegularData3D< ValueType >::IndexType | The index type used to refer to a specific element in the grid (x-, y-, and z-index) |
| BALL::TriangulatedSphere::Face | |
| BALL::TriangulatedSurface | |
| BALL::TriangulatedSAS | |
| BALL::TriangulatedSES | |
| BALL::TriangulatedSphere | |
| BALL::Triple< T1, T2, T3 > | |
| BALL::TRRFile::TRRHeader | |
| BALL::TSimpleBox3< T > | |
| BALL::TSimpleMolecularGraph< Node, Edge > | |
| BALL::TSphere3< T > | |
| BALL::VIEW::Sphere | |
| BALL::TSurface< T > | |
| BALL::TSurface< T >::Triangle | |
| BALL::TVector3< T > | |
| BALL::TVector4< T > | |
| BALL::UCK | |
| BALL::UhligCavFreeEnergyProcessor::Default | |
| BALL::UhligCavFreeEnergyProcessor::Option | |
| BALL::UnaryFunctor< ArgumentType, ResultType > | |
| BALL::UpperTriangularTraits | |
| BALL::VanDerWaals::Default | |
| BALL::VanDerWaals::Option | |
| BALL::Vector< valuetype > | |
| BALL::VectorIteratorTraits< valuetype > | |
| BALL::VIEW::AddBackboneModel::ModelPart | |
| BALL::VIEW::Camera | |
| BALL::VIEW::ChannelFormat | |
| BALL::VIEW::ClippingPlane | |
| BALL::VIEW::ColorExtension2 | |
| BALL::VIEW::TwoColoredLine | |
| BALL::VIEW::TwoColoredTube | |
| BALL::VIEW::ColorHSV | |
| BALL::VIEW::ColorRGBA | |
| BALL::VIEW::ColorUnit | |
| BALL::VIEW::ColorUnitHue | |
| BALL::VIEW::CompositeManager | |
| BALL::VIEW::ConnectionObject | |
| BALL::VIEW::MainControl | |
| BALL::VIEW::ModularWidget | |
| BALL::VIEW::Dataset | |
| BALL::VIEW::DockResultDialog::Compare_ | |
| BALL::VIEW::EditableScene::EditOperation | |
| BALL::VIEW::FieldLineCreator | |
| BALL::VIEW::FieldLinesDialog | |
| BALL::VIEW::FrameBuffer | |
| BALL::VIEW::FrameBufferFormat | |
| BALL::VIEW::GeometricObject | |
| BALL::VIEW::Box | |
| BALL::VIEW::Disc | |
| BALL::VIEW::GridVisualisation | |
| BALL::VIEW::Label | |
| BALL::VIEW::Line | |
| BALL::VIEW::Mesh | |
| BALL::VIEW::MultiLine | |
| BALL::VIEW::Point | |
| BALL::VIEW::QuadMesh | |
| BALL::VIEW::SimpleBox | |
| BALL::VIEW::Sphere | |
| BALL::VIEW::Tube | |
| BALL::VIEW::TwoColoredLine | |
| BALL::VIEW::TwoColoredTube | |
| BALL::VIEW::GLDisplayList | |
| BALL::VIEW::Hotkey | |
| BALL::VIEW::IconLoader | |
| BALL::VIEW::InputDeviceDriver | |
| BALL::VIEW::FakeDriver | |
| BALL::VIEW::InputPlugin | |
| BALL::VIEW::LightSource | |
| BALL::VIEW::MeshBuffer | |
| BALL::VIEW::Message | |
| BALL::VIEW::CompositeMessage | |
| BALL::VIEW::CreateRepresentationMessage | |
| BALL::VIEW::DatasetMessage | |
| BALL::VIEW::DeselectControlsMessage | |
| BALL::VIEW::DockingFinishedMessage | Message to notify docking has finished |
| BALL::VIEW::FinishedSimulationMessage | |
| BALL::VIEW::GenericSelectionMessage | |
| BALL::VIEW::ControlSelectionMessage | |
| BALL::VIEW::GeometricObjectSelectionMessage | |
| BALL::VIEW::MolecularTaskMessage | |
| BALL::VIEW::NewSelectionMessage | |
| BALL::VIEW::RegisterHelpSystemMessage | |
| BALL::VIEW::RepresentationMessage | Base class for all messages concerning a Representation |
| BALL::VIEW::SceneMessage | |
| BALL::VIEW::ShowDisplayPropertiesMessage | |
| BALL::VIEW::ShowHelpMessage | |
| BALL::VIEW::SyncClippingPlanesMessage | |
| BALL::VIEW::TransformationMessage | |
| BALL::VIEW::ModelInformation | |
| BALL::VIEW::MultiColorExtension | |
| BALL::VIEW::Mesh | |
| BALL::VIEW::MultiLine | |
| BALL::VIEW::QuadMesh | |
| BALL::VIEW::PixelFormat | |
| BALL::VIEW::POVRenderer::POVRendererClippingPlane | |
| BALL::VIEW::PreferencesEntry | |
| BALL::VIEW::AmberConfigurationDialog | |
| BALL::VIEW::AssignBondOrderConfigurationDialog | |
| BALL::VIEW::CharmmConfigurationDialog | |
| BALL::VIEW::ColoringSettingsDialog | |
| BALL::VIEW::DisplayProperties | |
| BALL::VIEW::DockDialog | |
| BALL::VIEW::EditSettings | |
| BALL::VIEW::FDPBDialog | |
| BALL::VIEW::GeometricFitDialog | |
| BALL::VIEW::LightSettings | |
| BALL::VIEW::MainControlPreferences | |
| BALL::VIEW::MaterialSettings | |
| BALL::VIEW::MinimizationDialog | |
| BALL::VIEW::MMFF94ConfigurationDialog | |
| BALL::VIEW::ModelSettingsDialog | |
| BALL::VIEW::MolecularDynamicsDialog | |
| BALL::VIEW::NetworkPreferences | |
| BALL::VIEW::OpenSavePreferences | |
| BALL::VIEW::PluginDialog | |
| BALL::VIEW::PythonSettings | |
| BALL::VIEW::ServerPreferences | |
| BALL::VIEW::ShortcutDialog | |
| BALL::VIEW::StageSettings | |
| BALL::VIEW::PreferencesEntry::ExtendedPreferencesObject | |
| BALL::VIEW::ColorTable | |
| BALL::VIEW::HotkeyTable | |
| BALL::VIEW::ShortcutRegistry | |
| BALL::VIEW::PubChemDialog::ParsedResult_ | |
| BALL::VIEW::QuadMesh::Quadruple | |
| BALL::VIEW::RaytraceableGrid | |
| BALL::VIEW::RenderTarget | |
| BALL::VIEW::RenderWindow< taPixelDatatype > | |
| BALL::VIEW::GLOffscreenTarget | |
| BALL::VIEW::RenderWindow< float > | |
| BALL::VIEW::GLRenderWindow | |
| BALL::VIEW::Resolution | |
| BALL::VIEW::SDWidget::Default | Default values for options |
| BALL::VIEW::SDWidget::Option | Option names |
| BALL::VIEW::SnapshotManagerInterface | |
| BALL::VIEW::Stage | |
| BALL::VIEW::Stage::RaytracingMaterial | |
| BALL::VIEW::Vertex | |
| BALL::VIEW::Label | |
| BALL::VIEW::Point | |
| BALL::VIEW::Vertex2 | |
| BALL::VIEW::Line | |
| BALL::VIEW::Tube | |
| BALL::VIEW::TwoColoredLine | |
| BALL::VIEW::TwoColoredTube | |
| BALL::VIEW::VIEWPlugin | |
| BALL::Visitor< Host > | |
| iostream | |
| BALL::TCPIOStream | |
| BALL_DEFAULT_MUTEX_TYPE | |
| BALL::TMutex< BALL_DEFAULT_MUTEX_TYPE > | |
| BALL_MAP_NAME | |
| BALL::HashMap< Key, T > | HashMap class based on the STL map (containing serveral convenience functions) |
| BALL::StringHashMap< BALL::Atom::Type > | |
| BALL::StringHashMap< BALL::GAFFCESParser * > | |
| BALL::StringHashMap< BALL::GAMESSDatFile::block > | |
| BALL::StringHashMap< BALL::HybridisationProcessor::Elements_ > | |
| BALL::StringHashMap< BALL::JohnsonBoveyShiftProcessor::Ring > | |
| BALL::StringHashMap< BALL::String > | |
| BALL::StringHashMap< BALL::StringHashMap< BALL::StringHashMap< std::multimap< float, BALL::HybridisationProcessor::AtomNames_ > > > > | |
| BALL::StringHashMap< BALL::TVector3 > | |
| BALL::StringHashMap< BALL::VIEW::ColorRGBA > | |
| BALL::StringHashMap< BALL_INDEX_TYPE > | |
| BALL::StringHashMap< BALL_SIZE_TYPE > | |
| BALL::StringHashMap< boost::shared_ptr< BALL::BondOrderAssignmentStrategy > > | |
| BALL::StringHashMap< CreateMethod > | |
| BALL::StringHashMap< CreationMethod > | |
| BALL::StringHashMap< double * > | |
| BALL::StringHashMap< double(*)(double)> | |
| BALL::StringHashMap< EmbeddableVector > | |
| BALL::StringHashMap< float > | |
| BALL::StringHashMap< JCAMPValue > | |
| BALL::StringHashMap< list< BALL_SIZE_TYPE > > | |
| BALL::StringHashMap< RuleList > | |
| BALL::StringHashMap< SectionIterator > | |
| BALL::StringHashMap< std::list< BALL::String >::iterator > | |
| BALL::StringHashMap< String > | |
| BALL::Options | |
| BALL::StringHashMap< StringHashMap< String > > | |
| BALL::StringHashMap< vector< BALL::ResidueTorsions::Data > > | |
| BALL::StringHashMap< vector< BALL_SIZE_TYPE > > | |
| BALL::HashMap< BALL::Atom *, BALL::NodeItem * > | |
| BALL::HashMap< BALL::Atom *, BALL_INDEX_TYPE > | |
| BALL::HashMap< BALL::Atom *, int > | |
| BALL::HashMap< BALL::Atom const *, BALL::TSurface > | |
| BALL::HashMap< BALL::Atom const *, float > | |
| BALL::HashMap< BALL::Atom::Type, BALL::HashMap< BALL::Atom::Type, BALL_SIZE_TYPE > > | |
| BALL::HashMap< BALL::Atom::Type, BALL_INDEX_TYPE > | |
| BALL::HashMap< BALL::Bond *, BALL::EdgeItem * > | |
| BALL::HashMap< BALL::Bond *, BALL_INDEX_TYPE > | |
| BALL::HashMap< BALL::Bond *, int > | |
| BALL::HashMap< BALL::Bond *, vector< float > > | |
| BALL::HashMap< BALL::Bond const *, std::deque< BALL_SIZE_TYPE > > | |
| BALL::HashMap< BALL::EdgeItem< BALL_INDEX_TYPE, BALL_INDEX_TYPE > *, BALL_SIZE_TYPE > | |
| BALL::HashMap< BALL::Embeddable *, string > | |
| BALL::HashMap< BALL::Molecule *, BALL::TimeStamp > | |
| BALL::HashMap< BALL::NodeItem< BALL_INDEX_TYPE, BALL_INDEX_TYPE > *, BALL::NodeItem< BALL_INDEX_TYPE, BALL_INDEX_TYPE > * > | |
| BALL::HashMap< BALL::NodeItem< BALL_INDEX_TYPE, BALL_INDEX_TYPE > *, BALL::RingPerceptionProcessor::TNode_ * > | |
| BALL::HashMap< BALL::NodeItem< BALL_INDEX_TYPE, BALL_INDEX_TYPE > *, BALL_SIZE_TYPE > | |
| BALL::HashMap< BALL::RingPerceptionProcessor::TNode_ *, BALL::NodeItem< BALL_INDEX_TYPE, BALL_INDEX_TYPE > * > | |
| BALL::HashMap< BALL::SnapShotManager *, boost::shared_ptr< BALL::VIEW::SnapshotVisualisationDialog > > | |
| BALL::HashMap< BALL::SortedPosition2, std::deque< BALL_INDEX_TYPE > > | |
| BALL::HashMap< BALL::SortedPosition3, BALL::RSComputer::ProbePosition * > | |
| BALL::HashMap< BALL::String, BALL::MMFF94AtomTyper::AromaticType > | |
| BALL::HashMap< BALL::String, BALL::ResidueRotamerSet > | |
| BALL::HashMap< BALL::String, float > | |
| BALL::HashMap< BALL::String, QIcon * > | |
| BALL::HashMap< BALL::String, QImage > | |
| BALL::HashMap< BALL::VIEW::ClippingPlane *, QTreeWidgetItem * > | |
| BALL::HashMap< BALL::VIEW::Dataset *, QTreeWidgetItem * > | |
| BALL::HashMap< BALL::VIEW::Representation *, QTreeWidgetItem * > | |
| BALL::HashMap< BALL_INDEX_TYPE, BALL::HashMap< BALL_INDEX_TYPE, BALL::HashMap< BALL::String, BALL::ResidueRotamerSet > > > | |
| BALL::HashMap< BALL_SIZE_TYPE, BALL::EdgeItem< BALL_INDEX_TYPE, BALL_INDEX_TYPE > * > | |
| BALL::HashMap< BALL_SIZE_TYPE, BALL::HashMap< BALL_SIZE_TYPE, BALL::HashMap< BALL_SIZE_TYPE, BALL::SESSingularityCleaner::ProbeIntersection * > > > | |
| BALL::HashMap< BALL_SIZE_TYPE, BALL::HashMap< BALL_SIZE_TYPE, BALL::HashMap< int, float > > > | |
| BALL::HashMap< BALL_SIZE_TYPE, BALL::HashMap< BALL_SIZE_TYPE, float > > | |
| BALL::HashMap< BALL_SIZE_TYPE, BALL::TriangulatedSurface > | |
| BALL::HashMap< BALL_SIZE_TYPE, BALL::VIEW::ColorRGBA > | |
| BALL::HashMap< BALL_SIZE_TYPE, BALL_SIZE_TYPE > | |
| BALL::HashMap< BALL_SIZE_TYPE, QMenu * > | |
| BALL::HashMap< BALL_SIZE_TYPE, std::list< BALL::TrianglePoint * > > | |
| BALL::HashMap< char, std::pair< BALL::ConnectedToPredicate::CTPNode *, BALL::ConnectedToPredicate::CTPNode * > > | |
| BALL::HashMap< const Atom *, float > | |
| BALL::HashMap< const BALL::Atom *, BALL_SIZE_TYPE > | |
| BALL::HashMap< const BALL::Atom *, bool > | |
| BALL::HashMap< const BALL::Composite *, BALL_SIZE_TYPE > | |
| BALL::HashMap< const BALL::Residue *, BALL_SIZE_TYPE > | |
| BALL::HashMap< const BALL::Residue *, const BALL::Residue * > | |
| BALL::HashMap< const BALL::TRegularData3D *, BALL_SIZE_TYPE > | |
| BALL::HashMap< const GeometricObject *, Name > | |
| BALL::HashMap< const QObject *, BALL::String > | |
| BALL::HashMap< const QObject *, String > | |
| BALL::HashMap< const Representation *, GLDisplayList * > | |
| BALL::HashMap< const Representation *, vector< MeshBuffer * > > | |
| BALL::HashMap< int, QDialog * > | |
| BALL::HashMap< int, QTreeWidgetItem * > | |
| BALL::HashMap< int, vector< int > > | |
| BALL::HashMap< LongSize, void * > | |
| BALL::HashMap< Name, const GeometricObject * > | |
| BALL::HashMap< PDB::Integer, PDBAtom * > | |
| BALL::HashMap< Position, BondData > | |
| BALL::HashMap< Position, EmpiricalBondData > | |
| BALL::HashMap< Position, pair< double, double > > | |
| BALL::HashMap< QTreeWidgetItem *, BALL::VIEW::ClippingPlane * > | |
| BALL::HashMap< QTreeWidgetItem *, BALL::VIEW::Dataset * > | |
| BALL::HashMap< QTreeWidgetItem *, BALL::VIEW::PreferencesEntry * > | |
| BALL::HashMap< QTreeWidgetItem *, BALL::VIEW::Representation * > | |
| BALL::HashMap< QTreeWidgetItem *, QWidget * > | |
| BALL::HashMap< QWidget *, QTreeWidgetItem * > | |
| BALL::HashMap< Residue *, Residue * > | |
| BALL::HashMap< ResidueQuadruple, Residue * > | |
| BALL::HashMap< std::pair< BALL_SIZE_TYPE, BALL_SIZE_TYPE >, BALL_SIZE_TYPE > | |
| BALL::HashMap< String, double > | |
| BALL::HashMap< String, Size > | |
| BALL::HashMap< String, Value > | |
| BALL::StringHashMap< Value > | |
| BALL::HashMap< String, vector< double > > | |
| BALL::HashMap< unsigned long, Composite * > | |
| BALL::BaseFilterIterator< Predicate, IteratorBidirectional > | |
| BALL::ConstForwardFilterIterator< Predicate, IteratorBidirectional > | |
| BALL::ConstBidirectionalFilterIterator< Predicate, IteratorBidirectional > | |
| BALL::BidirectionalFilterIterator< Predicate, IteratorBidirectional > | Mutable bidirectional iterator |
| BALL::BaseFilterIterator< Predicate, IteratorForward > | |
| BALL::ConstForwardFilterIterator< Predicate, IteratorForward > | |
| BALL::ForwardFilterIterator< Predicate, IteratorForward > | |
| BALL::BaseFilterIterator< Predicate, IteratorRandomAccess > | |
| BALL::ConstForwardFilterIterator< Predicate, IteratorRandomAccess > | |
| BALL::ConstBidirectionalFilterIterator< Predicate, IteratorRandomAccess > | |
| BALL::ConstRandomAccessFilterIterator< Predicate, IteratorRandomAccess > | |
| BALL::RandomAccessFilterIterator< Predicate, IteratorRandomAccess > | |
| BALL::BaseIterator< Composite, Composite, Composite *, CompositeIteratorTraits > | |
| BALL::ConstForwardIterator< Composite, Composite, Composite *, CompositeIteratorTraits > | |
| BALL::ConstBidirectionalIterator< Composite, Composite, Composite *, CompositeIteratorTraits > | |
| BALL::BidirectionalIterator< Composite, Composite, Composite *, CompositeIteratorTraits > | |
| BALL::BidirectionalIterator< Composite, Composite, Composite *, CompositeIteratorTraits > | |
| BALL::ConstBidirectionalIterator< Composite, Composite, Composite *, CompositeIteratorTraits > | |
| BALL::ConstForwardIterator< Composite, Composite, Composite *, CompositeIteratorTraits > | |
| BALL::BinaryFileAdaptor< BALL_SIZE_TYPE > | |
| BALL::BinaryFileAdaptor< char > | |
| BALL::BinaryFileAdaptor< double > | |
| BALL::BinaryFileAdaptor< float > | |
| BALL::BinaryFunctor< T1, T2, Processor::Result > | |
| BALL::BinaryProcessor< T1, T2 > | |
| quaternion | |
| BALL::TQuaternion< T > | |
| BALL::TQuaternion< float > | |
| BALL::EdgeItem< BALL_INDEX_TYPE, BALL_INDEX_TYPE > | |
| BALL::GraphEdge< RSVertex, RSEdge, RSFace > | |
| BALL::RSEdge | |
| BALL::GraphEdge< SASVertex, SASEdge, SASFace > | |
| BALL::SASEdge | |
| BALL::GraphEdge< SESVertex, SESEdge, SESFace > | |
| BALL::SESEdge | |
| BALL::GraphEdge< TrianglePoint, TriangleEdge, Triangle > | |
| BALL::TriangleEdge | |
| BALL::GraphFace< SASVertex, SASEdge, SASFace > | |
| BALL::SASFace | |
| BALL::GraphFace< SESVertex, SESEdge, SESFace > | |
| BALL::SESFace | |
| BALL::GraphTriangle< RSVertex, RSEdge, RSFace > | |
| BALL::RSFace | |
| BALL::GraphTriangle< TrianglePoint, TriangleEdge, Triangle > | |
| BALL::Triangle | |
| BALL::GraphVertex< RSVertex, RSEdge, RSFace > | |
| BALL::RSVertex | |
| BALL::GraphVertex< SASVertex, SASEdge, SASFace > | |
| BALL::SASVertex | |
| BALL::GraphVertex< SESVertex, SESEdge, SESFace > | |
| BALL::SESVertex | |
| BALL::GraphVertex< TrianglePoint, TriangleEdge, Triangle > | |
| BALL::TrianglePoint | |
| BALL::HashGrid3< BALL::BindingPocketProcessor::Sphere_ > | |
| BALL::HashGrid3< BALL_INDEX_TYPE > | |
| BALL::HashGrid3< const Atom * > | |
| BALL::HashGrid3< const BALL::Atom * > | |
| BALL::HashGridBox3< BALL::BindingPocketProcessor::Sphere_ > | |
| BALL::HashGridBox3< BALL_INDEX_TYPE > | |
| BALL::HashGridBox3< const Atom * > | |
| BALL::HashGridBox3< const BALL::Atom * > | |
| BALL::HashSet< BALL::Atom * > | |
| BALL::HashSet< BALL::Bond * > | |
| BALL::HashSet< BALL::Composite * > | |
| BALL::HashSet< BALL::ConnectedToPredicate::CTPNode * > | |
| BALL::HashSet< BALL::EdgeItem< BALL_INDEX_TYPE, BALL_INDEX_TYPE > * > | |
| BALL::HashSet< BALL::Element::AtomicNumber > | |
| BALL::HashSet< BALL::NodeItem< BALL_INDEX_TYPE, BALL_INDEX_TYPE > * > | |
| BALL::HashSet< BALL::Residue * > | |
| BALL::HashSet< BALL::RSFace * > | |
| BALL::HashSet< BALL::RSVertex * > | |
| BALL::HashSet< BALL::String > | |
| BALL::HashSet< BALL::VIEW::PreferencesEntry * > | |
| BALL::HashSet< BALL::VIEW::Representation * > | |
| BALL::HashSet< BALL_SIZE_TYPE > | |
| BALL::HashSet< const ::BALL::BALL::Atom * > | |
| BALL::HashSet< const BALL::Atom * > | |
| BALL::HashSet< const BALL::Bond * > | |
| BALL::HashSet< const BALL::VIEW::Mesh * > | |
| BALL::HashSet< const BALL::VIEW::Representation * > | |
| BALL::HashSet< const PersistentObject * > | |
| BALL::HashSet< Edge * > | |
| BALL::HashSet< Face * > | |
| BALL::HashSet< QAction * > | |
| BALL::HashSet< QObject * > | |
| BALL::HashSet< RSEdge * > | |
| BALL::HashSet< RSFace * > | |
| BALL::HashSet< SASEdge * > | |
| BALL::HashSet< SASFace * > | |
| BALL::HashSet< SESEdge * > | |
| BALL::HashSet< SESFace * > | |
| BALL::HashSet< String > | |
| BALL::HashSet< Triangle * > | |
| BALL::HashSet< TriangleEdge * > | |
| BALL::Matrix< double > | |
| MolecularGraphBase | |
| BALL::MolecularGraph | |
| MutexLockerType | |
| BALL::TMutexLocker< MutexLockerType, MutexType > | |
| QAbstractListModel | |
| BALL::VIEW::PluginModel | |
| QAbstractTableModel | |
| BALL::VIEW::ShortcutTableModel | |
| QCanvasRectangle | |
| BALL::VIEW::CanvasWidget::PixmapItem | |
| QCanvasView | |
| BALL::VIEW::CanvasWidget | |
| BALL::VIEW::RegularData1DWidget | |
| BALL::VIEW::RegularData2DWidget | |
| QDialog | |
| BALL::VIEW::AmberConfigurationDialog | |
| BALL::VIEW::AssignBondOrderConfigurationDialog | |
| BALL::VIEW::AssignBondOrderResultsDialog | |
| BALL::VIEW::AtomOverview | |
| BALL::VIEW::BondProperties | |
| BALL::VIEW::CharmmConfigurationDialog | |
| BALL::VIEW::ClippingDialog | |
| BALL::VIEW::CompositeProperties | |
| BALL::VIEW::ContourSurfaceDialog | |
| BALL::VIEW::DemoTutorialDialog | |
| BALL::VIEW::DisplayProperties | |
| BALL::VIEW::DockDialog | |
| BALL::VIEW::DockProgressDialog | |
| BALL::VIEW::DockResultDialog | |
| BALL::VIEW::DownloadElectronDensity | |
| BALL::VIEW::DownloadPDBFile | |
| BALL::VIEW::EditOperationDialog | |
| BALL::VIEW::EditSingleShortcut | |
| BALL::VIEW::ExportGeometryDialog | |
| BALL::VIEW::FDPBDialog | |
| BALL::VIEW::FieldLinesDialog | |
| BALL::VIEW::GeometricFitDialog | |
| BALL::VIEW::GridVisualizationDialog | |
| BALL::VIEW::LabelDialog | |
| BALL::VIEW::MinimizationDialog | |
| BALL::VIEW::MMFF94ConfigurationDialog | |
| BALL::VIEW::ModifyRepresentationDialog | |
| BALL::VIEW::MolecularDynamicsDialog | |
| BALL::VIEW::ParsedFunctionDialog | |
| BALL::VIEW::PDBInfoEditorWidget::EditorPDBInfoDialog | |
| BALL::VIEW::PeptideDialog | |
| BALL::VIEW::PluginDialog | |
| BALL::VIEW::Preferences | |
| BALL::VIEW::PTEDialog | |
| BALL::VIEW::PubChemDialog | |
| BALL::VIEW::RaytraceableContourSurfaceDialog | |
| BALL::VIEW::RunGAMESSDialog | |
| BALL::VIEW::SetCamera | |
| BALL::VIEW::SetClippingPlane | |
| BALL::VIEW::SnapshotVisualisationDialog | |
| BALL::VIEW::StereoSettingsDialog | |
| BALL::VIEW::UndoManagerDialog | |
| QDockWidget | |
| BALL::VIEW::DockWidget | |
| QEvent | |
| BALL::VIEW::DeviceEvent | |
| BALL::VIEW::ButtonEvent | |
| BALL::VIEW::HeadTrackingEvent | |
| BALL::VIEW::MotionTrackingEvent | |
| BALL::VIEW::TransformationEvent6D | |
| BALL::VIEW::LogEvent | Event class used for thread safe output to logview |
| BALL::VIEW::MessageEvent | |
| BALL::VIEW::NotificationEvent | |
| QGLWidget | |
| BALL::VIEW::GLRenderWindow | |
| QItemDelegate | |
| BALL::VIEW::ComboBoxDelegate | |
| QLineEdit | |
| BALL::VIEW::PyWidget::MyLineEdit | |
| QMainWindow | |
| BALL::VIEW::MainControl | |
| QMouseEvent | |
| BALL::VIEW::TestFramework::MyMouseEvent | |
| QObject | |
| BALL::PreferencesObject | |
| BALL::PluginManager | |
| BALL::SimpleDownloader | |
| BALL::SimpleDownloaderHelper::BasicHelper | |
| BALL::SimpleDownloaderHelper::DLArrayHelper | |
| BALL::SimpleDownloaderHelper::DLHelper | |
| BALL::SimpleDownloaderHelper::QFtpHackHelper | |
| BALL::VIEW::DatasetController | |
| BALL::VIEW::ServerWidget | |
| BALL::VIEW::ShortcutRegistry | |
| QPaintDevice | |
| BALL::VIEW::GLOffscreenTarget | |
| QPlainTextEdit | |
| BALL::VIEW::TextEditorWidget | |
| BALL::VIEW::PyWidget::MyTextEdit | |
| QPushButton | |
| BALL::VIEW::ColorButton | |
| QSyntaxHighlighter | |
| BALL::VIEW::PythonHighlighter | |
| QTableView | |
| BALL::VIEW::ShortcutTableView | |
| QTableWidget | |
| BALL::VIEW::ColorTable | |
| BALL::VIEW::HotkeyTable | |
| QTextBrowser | |
| BALL::VIEW::DragLogView | |
| BALL::VIEW::MyTextBrowser | |
| QThread | |
| BALL::SimpleDownloaderHelper::HelperThread | |
| BALL::SimpleDownloaderHelper::DLThread | |
| BALL::SimpleDownloaderHelper::UPThread | |
| BALL::SimpleDownloaderHelper::QFtpHackThread | |
| BALL::TCPServerThread | |
| BALL::VIEW::AnimationThread | |
| BALL::VIEW::BALLThread | |
| BALL::VIEW::CalculateFDPBThread | |
| BALL::VIEW::DockingThread | Thread for Docking |
| BALL::VIEW::ServerWidget::BALLViewServer | |
| BALL::VIEW::SimulationThread | |
| BALL::VIEW::EnergyMinimizerThread | Thread for EnergyMinimization |
| BALL::VIEW::MDSimulationThread | Thread for MDSimulation |
| BALL::VIEW::UpdateRepresentationThread | |
| BALL::VIEW::FakeDriver | |
| BALL::VIEW::RenderSetup | |
| BALL::VIEW::RunPythonThread | |
| BALL::VIEW::TestFramework::MyEventThread | |
| QTreeWidget | |
| BALL::VIEW::TreeWidget | |
| QTreeWidgetItem | |
| BALL::VIEW::MolecularControl::MyTreeWidgetItem | |
| QValidator | |
| BALL::VIEW::PythonValidator | |
| QWidget | |
| BALL::VIEW::ColoringSettingsDialog | |
| BALL::VIEW::DockingController | |
| BALL::VIEW::EditSettings | |
| BALL::VIEW::GridColorWidget | |
| BALL::VIEW::LightSettings | |
| BALL::VIEW::MainControlPreferences | |
| BALL::VIEW::MaterialSettings | |
| BALL::VIEW::ModelSettingsDialog | |
| BALL::VIEW::MolecularFileDialog | |
| BALL::VIEW::MolecularStructure | |
| BALL::VIEW::NetworkPreferences | |
| BALL::VIEW::OpenBruker1DFile | |
| BALL::VIEW::OpenBruker2DFile | |
| BALL::VIEW::OpenSavePreferences | |
| BALL::VIEW::PropEditorWidget | |
| BALL::VIEW::BoolEditorWidget | |
| BALL::VIEW::DoubleEditorWidget | |
| BALL::VIEW::FloatEditorWidget | |
| BALL::VIEW::IntEditorWidget | |
| BALL::VIEW::PDBInfoEditorWidget | |
| BALL::VIEW::PropDeleteWidget | |
| BALL::VIEW::StringEditorWidget | |
| BALL::VIEW::UIntEditorWidget | |
| BALL::VIEW::PropertyEditor | |
| BALL::VIEW::PythonSettings | |
| BALL::VIEW::Scene | |
| BALL::VIEW::SDWidget | |
| BALL::VIEW::ServerPreferences | |
| BALL::VIEW::ShortcutDialog | |
| BALL::VIEW::StageSettings | |
| BALL::VIEW::TestFramework | |
| BALL::VIEW::TextEditorWidget::LineNumbers | |
| ReadLockerType | |
| BALL::TReadLocker< ReadLockerType, ReadWriteLockType > | |
| ReadWriteLockType | |
| BALL::TReadWriteLock< ReadWriteLockType > | |
| std::basic_string< Char > | STL class |
| std::string | STL class |
| BALL::String | |
| binary_function | |
| BALL::ResidueRotamerSet::RotamerProbabilityGreaterThan_ | |
| std::exception | STL class |
| BALL::Exception::GeneralException | |
| BALL::Bit::IllegalOperation | |
| BALL::Bond::NotBound | |
| BALL::Client::InvalidClient | |
| BALL::Client::NoPersistentObject | |
| BALL::EnumeratorIndex::IncompatibleIndex | |
| BALL::Exception::BufferOverflow | |
| BALL::Exception::CUDAError | |
| BALL::Exception::DivisionByZero | |
| BALL::Exception::FileNotFound | |
| BALL::Exception::FormatUnsupported | |
| BALL::Exception::IllegalPosition | |
| BALL::Exception::IllegalSelfOperation | |
| BALL::Exception::IllegalTreeOperation | |
| BALL::Exception::IncompatibleIterators | |
| BALL::Exception::IndexOverflow | |
| BALL::Exception::IndexUnderflow | |
| BALL::Exception::InvalidArgument | |
| BALL::Exception::InvalidFormat | |
| BALL::Exception::InvalidIterator | |
| BALL::Exception::InvalidOption | Exception to be thrown if an invalid option is given |
| BALL::Exception::InvalidRange | |
| BALL::Exception::InvalidSize | |
| BALL::Exception::MatrixHasWrongDimension | |
| BALL::Exception::MatrixIsSingular | |
| BALL::Exception::MatrixNotQuadratic | |
| BALL::Exception::MatrixNotRegular | |
| BALL::Exception::NoBufferAvailable | |
| BALL::Exception::NotImplemented | |
| BALL::Exception::NotInitialized | |
| BALL::Exception::NullPointer | |
| BALL::Exception::OutOfGrid | |
| BALL::Exception::OutOfMemory | |
| BALL::Exception::OutOfRange | |
| BALL::Exception::ParseError | |
| BALL::Exception::Postcondition | |
| BALL::Exception::Precondition | |
| BALL::Exception::SingularIterator | |
| BALL::Exception::SizeUnderflow | |
| BALL::Exception::TooManyBonds | Exception to be thrown if too many bonds for one atom |
| BALL::Exception::TooManyErrors | Exception to be thrown if too many errors occur, e.g. in ForceField |
| BALL::Exception::Uninitialized | |
| BALL::Exception::VectorHasWrongDimension | |
| BALL::File::CannotWrite | |
| BALL::FragmentDB::NoFragmentNode | |
| BALL::GRAPH::IllegalStateException | |
| BALL::GRAPH::UnconnectedGraphException | |
| BALL::HashMap< Key, T >::IllegalKey | HashMap illegal key exception |
| BALL::HashSet< Key >::IllegalKey | |
| BALL::QSAR::Exception::ConfigurationReadingError | |
| BALL::QSAR::Exception::FeatureSelectionParameterError | |
| BALL::QSAR::Exception::InconsistentUsage | |
| BALL::QSAR::Exception::InvalidActivityID | |
| BALL::QSAR::Exception::KernelParameterError | |
| BALL::QSAR::Exception::ModelParameterError | |
| BALL::QSAR::Exception::NoPCAVariance | |
| BALL::QSAR::Exception::PropertyError | |
| BALL::QSAR::Exception::SingularMatrixError | |
| BALL::QSAR::Exception::TooManyPLSComponents | |
| BALL::QSAR::Exception::WrongDataType | |
| BALL::QSAR::Exception::WrongFileFormat | |
| BALL::RMSDMinimizer::IncompatibleCoordinateSets | |
| BALL::RMSDMinimizer::TooFewCoordinates | |
| BALL::Substring::InvalidSubstring | |
| BALL::Substring::UnboundSubstring | |
| BALL::VIEW::ColorUnit::NotInHexFormat | |
| BALL::VIEW::GLDisplayList::DisplayListRedeclaration | |
| BALL::VIEW::GLDisplayList::NestedDisplayList | |
| BALL::VIEW::GLDisplayList::NoDisplayListAvailable | |
| BALL::VIEW::GLRenderer::WrongModes | |
| BALL::VIEW::ServerWidget::NotCompositeObject | |
| std::bad_alloc | STL class |
| BALL::Exception::OutOfMemory | |
| std::ios_base | STL class |
| std::basic_ios< Char > | STL class |
| std::basic_istream< Char > | STL class |
| std::basic_iostream< Char > | STL class |
| std::basic_fstream< Char > | STL class |
| std::fstream | STL class |
| BALL::File | |
| BALL::AmiraMeshFile | |
| BALL::Bruker1DFile | |
| BALL::Bruker2DFile | |
| BALL::CCP4File | |
| BALL::CIFFile | |
| BALL::NMRStarFile | This class provides methods for reading and assigning chemical shifts |
| BALL::DSN6File | |
| BALL::LineBasedFile | |
| BALL::GenericMolFile | |
| BALL::AntechamberFile | |
| BALL::GAMESSDatFile | |
| BALL::GAMESSLogFile | |
| BALL::HINFile | |
| BALL::KCFFile | |
| BALL::MOL2File | |
| BALL::MOLFile | |
| BALL::SDFile | |
| BALL::PDBFile | |
| BALL::XYZFile | |
| BALL::JCAMPFile | |
| BALL::SCWRLRotamerFile | Reads Dunbrack/SCWRL rotamer library files |
| BALL::ResourceFile | |
| BALL::TrajectoryFile | |
| BALL::DCDFile | |
| BALL::TRRFile | |
| std::basic_ostream< Char > | STL class |
| std::basic_iostream< Char > | STL class |
| std::ostream | STL class |
| BALL::LogStream | |
| std::list< T > | STL class |
| BALL::List< Value > | |
| BALL::PeakList< PT > | |
| BALL::PyCompositeList | |
| BALL::PyIndexList | |
| BALL::PeakList< Peak< float > > | |
| streambuf | |
| BALL::LogStreamBuf | |
| std::vector< T > | STL class |
| BALL::AtomBijection | |
| BALL::AtomVector | |
| BALL::EnumeratorIndex | |
| BALL::Gradient | |
| BALL::PyColorRGBAVector | |
| BALL::PyDatasetVector | |
| BALL::VIEW::ColorMap | |
| BALL::TAngle< double > | |
| BALL::TAngle< float > | |
| BALL::TCircle3< double > | |
| BALL::TMatrix4x4< float > | |
| BALL::TreeWidth< OriginalGraphType > | |
| BALL::TRegularData1D< float > | |
| BALL::TRegularData1D< std::complex< ComplexTraits::ComplexPrecision > > | |
| BALL::TFFT1D< ComplexTraits > | |
| BALL::TRegularData2D< float > | |
| BALL::TRegularData2D< std::complex< ComplexTraits::ComplexPrecision > > | |
| BALL::TFFT2D< ComplexTraits > | |
| BALL::TRegularData3D< BALL::TVector3 > | |
| BALL::TRegularData3D< char > | |
| BALL::TRegularData3D< float > | |
| BALL::TRegularData3D< std::complex< ComplexTraits::ComplexPrecision > > | |
| BALL::TFFT3D< ComplexTraits > | |
| BALL::TRegularData3D< T > | |
| BALL::TSimpleBox3< double > | |
| BALL::TSimpleBox3< float > | |
| BALL::VIEW::SimpleBox | |
| BALL::TSphere3< double > | |
| BALL::TSurface< float > | |
| BALL::TContourSurface< T > | |
| BALL::VIEW::Mesh | |
| BALL::TVector3< double > | |
| BALL::TVector3< float > | |
| FieldLinesDialogData | |
| BALL::VIEW::FieldLinesDialog | |
| Ui_AmberConfigurationDialogData | |
| BALL::VIEW::AmberConfigurationDialog | |
| Ui_AssignBondOrderConfigurationDialogData | |
| BALL::VIEW::AssignBondOrderConfigurationDialog | |
| Ui_AssignBondOrderResultsDialogData | |
| BALL::VIEW::AssignBondOrderResultsDialog | |
| Ui_AtomOverviewData | |
| BALL::VIEW::AtomOverview | |
| Ui_BondPropertiesData | |
| BALL::VIEW::BondProperties | |
| Ui_CharmmConfigurationDialogData | |
| BALL::VIEW::CharmmConfigurationDialog | |
| Ui_ClippingDialogData | |
| BALL::VIEW::ClippingDialog | |
| Ui_ColoringSettingsDialogData | |
| BALL::VIEW::ColoringSettingsDialog | |
| Ui_CompositePropertiesData | |
| BALL::VIEW::CompositeProperties | |
| Ui_ContourSurfaceDialogData | |
| BALL::VIEW::ContourSurfaceDialog | |
| Ui_DemoTutorialDialogData | |
| BALL::VIEW::DemoTutorialDialog | |
| Ui_DisplayPropertiesData | |
| BALL::VIEW::DisplayProperties | |
| Ui_DockDialogData | |
| BALL::VIEW::DockDialog | |
| Ui_DockProgressDialogData | |
| BALL::VIEW::DockProgressDialog | |
| Ui_DockResultDialogData | |
| BALL::VIEW::DockResultDialog | |
| Ui_DownloadElectronDensityData | |
| BALL::VIEW::DownloadElectronDensity | |
| Ui_DownloadPDBFileData | |
| BALL::VIEW::DownloadPDBFile | |
| Ui_EditOperationDialogData | |
| BALL::VIEW::EditOperationDialog | |
| Ui_EditSettingsData | |
| BALL::VIEW::EditSettings | |
| Ui_EditSingleShortcutData | |
| BALL::VIEW::EditSingleShortcut | |
| Ui_ExportGeometryDialogData | |
| BALL::VIEW::ExportGeometryDialog | |
| Ui_FDPBDialogData | |
| BALL::VIEW::FDPBDialog | |
| Ui_GeometricFitDialogData | |
| BALL::VIEW::GeometricFitDialog | |
| Ui_GridVisualizationDialogData | |
| BALL::VIEW::GridVisualizationDialog | |
| Ui_LabelDialogData | |
| BALL::VIEW::LabelDialog | |
| Ui_LightSettingsData | |
| BALL::VIEW::LightSettings | |
| Ui_MainControlPreferencesData | |
| BALL::VIEW::MainControlPreferences | |
| Ui_MaterialSettingsData | |
| BALL::VIEW::MaterialSettings | |
| Ui_MinimizationDialogData | |
| BALL::VIEW::MinimizationDialog | |
| Ui_MMFF94ConfigurationDialogData | |
| BALL::VIEW::MMFF94ConfigurationDialog | |
| Ui_ModelSettingsDialogData | |
| BALL::VIEW::ModelSettingsDialog | |
| Ui_ModifyRepresentationDialogData | |
| BALL::VIEW::ModifyRepresentationDialog | |
| Ui_MolecularDynamicsDialogData | |
| BALL::VIEW::MolecularDynamicsDialog | |
| Ui_NetworkPreferencesData | |
| BALL::VIEW::NetworkPreferences | |
| Ui_OpenSavePreferencesData | |
| BALL::VIEW::OpenSavePreferences | |
| Ui_ParsedFunctionDialogData | |
| BALL::VIEW::ParsedFunctionDialog | |
| Ui_PeptideDialogData | |
| BALL::VIEW::PeptideDialog | |
| Ui_PluginDialogData | |
| BALL::VIEW::PluginDialog | |
| Ui_PreferencesData | |
| BALL::VIEW::Preferences | |
| Ui_PTEDialogData | |
| BALL::VIEW::PTEDialog | |
| Ui_PythonSettingsData | |
| BALL::VIEW::PythonSettings | |
| Ui_RaytraceableContourSurfaceDialogData | |
| BALL::VIEW::RaytraceableContourSurfaceDialog | |
| Ui_RunGAMESSDialogData | |
| BALL::VIEW::RunGAMESSDialog | |
| Ui_SetCameraData | |
| BALL::VIEW::SetCamera | |
| Ui_SetClippingData | |
| BALL::VIEW::SetClippingPlane | |
| Ui_ShortcutDialogData | |
| BALL::VIEW::ShortcutDialog | |
| Ui_SnapshotVisualisationDialogData | |
| BALL::VIEW::SnapshotVisualisationDialog | |
| Ui_StageSettingsData | |
| BALL::VIEW::StageSettings | |
| Ui_StereoSettingsDialogData | |
| BALL::VIEW::StereoSettingsDialog | |
| Ui_UndoManagerDialogData | |
| BALL::VIEW::UndoManagerDialog | |
| BALL::UnaryFunctor< Atom, Processor::Result > | |
| BALL::UnaryProcessor< Atom > | |
| BALL::AssignBaseProcessor | Only used for deriving interface |
| BALL::AssignTypeNameProcessor | |
| BALL::AssignTypeProcessor | |
| BALL::AssignRadiusProcessor | |
| BALL::AssignChargeProcessor | |
| BALL::BoundingBoxProcessor | |
| BALL::ClearChargeProcessor | |
| BALL::ClearRadiusProcessor | |
| BALL::GeometricCenterProcessor | |
| BALL::MMFF94ChargeProcessor | |
| BALL::RuleProcessor | |
| BALL::ChargeRuleProcessor | |
| BALL::RadiusRuleProcessor | |
| BALL::TypenameRuleProcessor | |
| BALL::TypeRuleProcessor | |
| BALL::SurfaceProcessor | |
| BALL::TransformationProcessor | |
| BALL::StructureMapper | |
| BALL::TranslationProcessor | |
| BALL::UnaryFunctor< AtomContainer, Processor::Result > | |
| BALL::UnaryProcessor< AtomContainer > | |
| BALL::AromaticityProcessor | This processor provides methods for detection and assignment of aromaticity |
| BALL::AssignBondOrderProcessor | Assignment of bond orders from topology information |
| BALL::BuildBondsProcessor | |
| BALL::ConnectedComponentsProcessor | |
| BALL::Descriptor | |
| BALL::ConnectivityBase | |
| BALL::BalabanIndexJ | |
| BALL::ZagrebIndex | |
| BALL::PartialChargeBase | |
| BALL::RelNegativePartialCharge | |
| BALL::RelPositivePartialCharge | |
| BALL::TotalNegativePartialCharge | |
| BALL::TotalPositivePartialCharge | |
| BALL::SimpleBase | |
| BALL::AtomicPolarizabilities | |
| BALL::AtomInformationContent | |
| BALL::BondPolarizabilities | |
| BALL::FormalCharge | |
| BALL::MeanAtomInformationContent | |
| BALL::MolecularWeight | |
| BALL::NumberOfAromaticAtoms | |
| BALL::NumberOfAromaticBonds | |
| BALL::NumberOfAtoms | |
| BALL::NumberOfBonds | |
| BALL::NumberOfBoron | |
| BALL::NumberOfBromine | |
| BALL::NumberOfCarbon | |
| BALL::NumberOfChlorine | |
| BALL::NumberOfDoubleBonds | |
| BALL::NumberOfFlourine | |
| BALL::NumberOfHeavyAtoms | |
| BALL::NumberOfHeavyBonds | |
| BALL::NumberOfHydrogen | |
| BALL::NumberOfHydrogenBondAcceptors | |
| BALL::NumberOfHydrogenBondDonors | |
| BALL::NumberOfHydrophobicAtoms | |
| BALL::NumberOfIodine | |
| BALL::NumberOfNitrogen | |
| BALL::NumberOfOxygen | |
| BALL::NumberOfPhosphorus | |
| BALL::NumberOfRotatableBonds | |
| BALL::NumberOfRotatableSingleBonds | |
| BALL::NumberOfSingleBonds | |
| BALL::NumberOfSulfur | |
| BALL::NumberOfTripleBonds | |
| BALL::PrincipalMomentOfInertia | |
| BALL::PrincipalMomentOfInertiaX | |
| BALL::PrincipalMomentOfInertiaY | |
| BALL::PrincipalMomentOfInertiaZ | |
| BALL::RelNumberOfRotatableBonds | |
| BALL::RelNumberOfRotatableSingleBonds | |
| BALL::SizeOfSSSR | |
| BALL::VertexAdjacency | |
| BALL::VertexAdjacencyEquality | |
| BALL::SurfaceBase | |
| BALL::Density | |
| BALL::HydrophobicVdWSurface | |
| BALL::NegativePolarVdWSurface | |
| BALL::NegativeVdWSurface | |
| BALL::PolarVdWSurface | |
| BALL::PositivePolarVdWSurface | |
| BALL::PositiveVdWSurface | |
| BALL::RelHydrophobicVdWSurface | |
| BALL::RelNegativePolarVdWSurface | |
| BALL::RelNegativeVdWSurface | |
| BALL::RelPolarVdWSurface | |
| BALL::RelPositivePolarVdWSurface | |
| BALL::RelPositiveVdWSurface | |
| BALL::VdWSurface | |
| BALL::VdWVolume | |
| BALL::EnergyProcessor | |
| BALL::ComposedEnergyProcessor | |
| BALL::Pair6_12InteractionEnergyProcessor | |
| BALL::PairExpInteractionEnergyProcessor | |
| BALL::PCMCavFreeEnergyProcessor | |
| BALL::PierottiCavFreeEnergyProcessor | |
| BALL::ReissCavFreeEnergyProcessor | |
| BALL::UhligCavFreeEnergyProcessor | |
| BALL::HybridisationProcessor | |
| BALL::PartialChargeProcessor | |
| BALL::RingAnalyser | Methods for the analysis of the structure of ringsystems |
| BALL::RingPerceptionProcessor | |
| BALL::SideChainPlacementProcessor | |
| BALL::UnaryFunctor< BALL::Composite, Processor::Result > | |
| BALL::UnaryProcessor< BALL::Composite > | |
| BALL::UnaryFunctor< Chain, Processor::Result > | |
| BALL::UnaryProcessor< Chain > | |
| BALL::PeptideCapProcessor | This processor adds ACE-N and NME-C caps to proteins |
| BALL::UnaryFunctor< Composite, Processor::Result > | |
| BALL::UnaryProcessor< Composite > | |
| BALL::AddHydrogenProcessor | |
| BALL::BindingPocketProcessor | |
| BALL::FragmentDistanceCollector | |
| BALL::GAFFTypeProcessor | |
| BALL::HBondProcessor | Computation of hydrogen bonds from topology information |
| BALL::SecondaryStructureProcessor | Secondary structure extraction from 3D structure |
| BALL::Selector | |
| BALL::ShiftModule | |
| BALL::AnisotropyShiftProcessor | |
| BALL::ClearShiftProcessor | |
| BALL::CreateSpectrumProcessor | |
| BALL::EFShiftProcessor | |
| BALL::EmpiricalHSShiftProcessor | |
| BALL::Experiment< PeakListType > | |
| BALL::SimpleExperiment1D | |
| BALL::HaighMallionShiftProcessor | |
| BALL::HBondShiftProcessor | |
| BALL::JohnsonBoveyShiftProcessor | |
| BALL::RandomCoilShiftProcessor | |
| BALL::ShiftModel | |
| BALL::ShiftModel1D | |
| BALL::ShiftModel2D | |
| BALL::VIEW::AtomOverview::ApplyProcessor | |
| BALL::VIEW::AtomOverview::OverviewProcessor | |
| BALL::VIEW::ModelProcessor | |
| BALL::UnaryFunctor< Fragment, Processor::Result > | |
| BALL::UnaryProcessor< Fragment > | |
| BALL::FragmentDB::BuildBondsProcessor | |
| BALL::FragmentDB::NormalizeNamesProcessor | |
| BALL::ReconstructFragmentProcessor | |
| BALL::UnaryFunctor< GeometricObject *, Processor::Result > | |
| BALL::UnaryProcessor< GeometricObject * > | |
| BALL::VIEW::ColorProcessor | |
| BALL::VIEW::AtomDistanceColorProcessor | |
| BALL::VIEW::ColorByGridProcessor | |
| BALL::VIEW::CustomColorProcessor | |
| BALL::VIEW::ElementColorProcessor | |
| BALL::VIEW::InterpolateColorProcessor | |
| BALL::VIEW::AtomChargeColorProcessor | |
| BALL::VIEW::ForceColorProcessor | |
| BALL::VIEW::OccupancyColorProcessor | |
| BALL::VIEW::TemperatureFactorColorProcessor | |
| BALL::VIEW::PositionColorProcessor | |
| BALL::VIEW::ChainColorProcessor | |
| BALL::VIEW::MoleculeColorProcessor | |
| BALL::VIEW::ResidueNameColorProcessor | |
| BALL::VIEW::ResidueNumberColorProcessor | |
| BALL::VIEW::ResidueTypeColorProcessor | |
| BALL::VIEW::SecondaryStructureColorProcessor | |
| BALL::UnaryFunctor< Residue, Processor::Result > | |
| BALL::UnaryProcessor< Residue > | |
| BALL::ResidueChecker | |
| BALL::UnaryFunctor< T, Processor::Result > | |
| BALL::UnaryProcessor< T > | |
| BALL::UnaryFunctor< UndirectedGraph, Size > | |
| BALL::TreeWidthImplementation< EditableGraph >::GeneralLowerBoundAlgorithm< Criterion, Reducer > | Generic lower bound algorithm on graphs |
| BALL::UnaryFunctor< UndirectedGraph, std::pair< std::vector< boost::graph_traits< UndirectedGraph::vertex_descriptor > >, Size > > | |
| BALL::TreeWidthImplementation< EditableGraph >::GreedyX< Criterion > | |
| BALL::Vector< double > | |
| BALL::Visitor< Composite > | |
| BALL::MolecularInformation | |
| WriteLockerType | |
| BALL::TWriteLocker< WriteLockerType, ReadWriteLockType > | |
| MutexType | |
| BALL::TMutex< MutexType > | |
| SESVertex * | |
| BALL_INDEX_TYPE | |
| BALL_SIZE_TYPE | |
| bool | |
| shared_array< float > | |
| const unsigned int | |
| double | |
| float | |
| IteratorBidirectional | |
| IteratorForward | |
| IteratorRandomAccess | |
| PT | |
| QMutex | |
| BALL::TMutex< QMutex > | |
| QReadWriteLock | |
| BALL::TReadWriteLock< QReadWriteLock > | |
| binary_function | |
| BALL::BinaryPredicate< T1, T2 > | |
| BALL::ConnectedToPredicate::CTPNode::greater_ | |
| pair< Atom *, Atom * > | |
| unary_function | |
| BALL::ParsedFunction< arg > | |
| BALL::UnaryPredicate< T > | |
| BALL::UnaryPredicate< Atom > | |
| BALL::ExpressionPredicate | |
| BALL::AromaticBondsPredicate | |
| BALL::AtomNamePredicate | |
| BALL::AtomTypePredicate | |
| BALL::AxialPredicate | |
| BALL::BackBonePredicate | |
| BALL::ChainPredicate | |
| BALL::ChargePredicate | |
| BALL::Conformation4C1Predicate | |
| BALL::ConnectedToPredicate | |
| BALL::ElementPredicate | |
| BALL::FalsePredicate | |
| BALL::InRingPredicate | |
| BALL::MoleculePredicate | |
| BALL::NucleicAcidPredicate | |
| BALL::NucleotidePredicate | |
| BALL::NumberOfBondsPredicate | |
| BALL::DoubleBondsPredicate | |
| BALL::TripleBondsPredicate | |
| BALL::SingleBondsPredicate | |
| BALL::ProteinPredicate | |
| BALL::ResidueIDPredicate | |
| BALL::ResiduePredicate | |
| BALL::SecondaryStructurePredicate | |
| BALL::SelectedPredicate | |
| BALL::SMARTSPredicate | |
| BALL::SolventPredicate | |
| BALL::Sp2HybridizedPredicate | |
| BALL::Sp3HybridizedPredicate | |
| BALL::SpHybridizedPredicate | |
| BALL::TruePredicate | |
| BALL::UnaryPredicate< BALL::Composite > | |
| BALL::UnaryPredicate< Composite > | |
| BALL::KernelPredicate< T > | Kernel predicate class |
| Value | |
1.8.3.1
