BALL::PierottiCavFreeEnergyProcessor Class Reference

#include <BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h>

Inheritance diagram for BALL::PierottiCavFreeEnergyProcessor:

Classes
struct	Default
struct	Option

Public Member Functions
Constructors and Destructors
	PierottiCavFreeEnergyProcessor ()
	PierottiCavFreeEnergyProcessor (const PierottiCavFreeEnergyProcessor &proc)
virtual	~PierottiCavFreeEnergyProcessor ()
Assignment
const PierottiCavFreeEnergyProcessor &	operator= (const PierottiCavFreeEnergyProcessor &proc)
virtual void	clear ()
Predicates
bool	operator== (const PierottiCavFreeEnergyProcessor &proc) const
processor functions
virtual bool	finish ()
Public Member Functions inherited from BALL::EnergyProcessor
	EnergyProcessor ()
	EnergyProcessor (const EnergyProcessor &proc)
virtual	~EnergyProcessor ()
const EnergyProcessor &	operator= (const EnergyProcessor &proc)
virtual bool	start ()
virtual Processor::Result	operator() (AtomContainer &fragment)
double	getEnergy () const
bool	isValid () const
bool	operator== (const EnergyProcessor &proc) const
Public Member Functions inherited from BALL::UnaryProcessor< AtomContainer >
	UnaryProcessor ()
	UnaryProcessor (const UnaryProcessor &)
virtual	~UnaryProcessor ()

Public Attributes
Options
Options	options

Private Member Functions
void	setDefaultOptions ()

Additional Inherited Members
Public Types inherited from BALL::UnaryFunctor< AtomContainer, Processor::Result >
typedef Processor::Result	result_type
typedef AtomContainer	argument_type
typedef AtomContainer &	argument_reference
typedef const AtomContainer &	const_argument_reference
typedef AtomContainer *	argument_pointer
typedef const AtomContainer *	const_argument_pointer
Protected Attributes inherited from BALL::EnergyProcessor
const AtomContainer *	fragment_
double	energy_
bool	valid_

Detailed Description

Processor for the computation of the cavitation free energy. This processor is using the SPT theory approach by Pierotti, Chem. Rev. 76(6):717–726, 1976 with the modification for non-spherical solutes by Huron/Claverie, J. Phys. Chem. 76(15):2123-2133, 1972.

Energy returned in units of kJ/mol.

Definition at line 32 of file pierottiCavFreeEnergyProcessor.h.

Constructor & Destructor Documentation

BALL::PierottiCavFreeEnergyProcessor::PierottiCavFreeEnergyProcessor

(

)

Default constructor

BALL::PierottiCavFreeEnergyProcessor::PierottiCavFreeEnergyProcessor

(

const PierottiCavFreeEnergyProcessor &

proc

)

Copy constructor

virtual BALL::PierottiCavFreeEnergyProcessor::~PierottiCavFreeEnergyProcessor ( )

virtual

Destructor

Member Function Documentation

virtual void BALL::PierottiCavFreeEnergyProcessor::clear ( )

virtual

Clear function

Reimplemented from BALL::EnergyProcessor.

virtual bool BALL::PierottiCavFreeEnergyProcessor::finish ( )

virtual

This is where the actual computation takes place.

Reimplemented from BALL::UnaryProcessor< AtomContainer >.

const PierottiCavFreeEnergyProcessor& BALL::PierottiCavFreeEnergyProcessor::operator=

(

const PierottiCavFreeEnergyProcessor &

proc

)

Assignment operator

bool BALL::PierottiCavFreeEnergyProcessor::operator==

(

const PierottiCavFreeEnergyProcessor &

proc

)

const

Equality operator

void BALL::PierottiCavFreeEnergyProcessor::setDefaultOptions ( )

private

Member Data Documentation

Options BALL::PierottiCavFreeEnergyProcessor::options

Options for the calculation of the caviation free energy

Definition at line 178 of file pierottiCavFreeEnergyProcessor.h.