BALL  1.4.2
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List of all members
BALL::SurfaceBase Class Reference

#include <BALL/QSAR/surfaceBase.h>

Inheritance diagram for BALL::SurfaceBase:
BALL::Descriptor BALL::UnaryProcessor< AtomContainer > BALL::UnaryFunctor< AtomContainer, Processor::Result > BALL::Density BALL::HydrophobicVdWSurface BALL::NegativePolarVdWSurface BALL::NegativeVdWSurface BALL::PolarVdWSurface BALL::PositivePolarVdWSurface BALL::PositiveVdWSurface BALL::RelHydrophobicVdWSurface BALL::RelNegativePolarVdWSurface BALL::RelNegativeVdWSurface BALL::RelPolarVdWSurface BALL::RelPositivePolarVdWSurface BALL::RelPositiveVdWSurface BALL::VdWSurface BALL::VdWVolume

Public Member Functions

Constructors and Destructors
 SurfaceBase ()
 
 SurfaceBase (const SurfaceBase &sb)
 
 SurfaceBase (const String &name)
 
 SurfaceBase (const String &name, const String &unit)
 
virtual ~SurfaceBase ()
 
Assignment
SurfaceBaseoperator= (const SurfaceBase &sb)
 
- Public Member Functions inherited from BALL::Descriptor
 Descriptor ()
 
 Descriptor (const Descriptor &descriptor)
 
 Descriptor (const String &name)
 
 Descriptor (const String &name, const String &unit)
 
virtual ~Descriptor ()
 
Descriptoroperator= (const Descriptor &descriptor)
 
Processor::Result operator() (AtomContainer &ac)
 
const StringgetName () const
 
void setName (const String &name)
 
void setUnit (const String &name)
 
const StringgetUnit () const
 
virtual double compute (AtomContainer &ac)
 
- Public Member Functions inherited from BALL::UnaryProcessor< AtomContainer >
 UnaryProcessor ()
 
 UnaryProcessor (const UnaryProcessor &)
 
virtual ~UnaryProcessor ()
 
virtual bool start ()
 
virtual bool finish ()
 

Protected Member Functions

Predicates
bool isValid_ (AtomContainer &ac)
 
Predicates

Accessors

void computeAllDescriptors (AtomContainer &ac)
 
void calculate_ (AtomContainer &ac)
 

Additional Inherited Members

- Public Types inherited from BALL::UnaryFunctor< AtomContainer, Processor::Result >
typedef Processor::Result result_type
 
typedef AtomContainer argument_type
 
typedef AtomContainerargument_reference
 
typedef const AtomContainerconst_argument_reference
 
typedef AtomContainerargument_pointer
 
typedef const AtomContainerconst_argument_pointer
 

Detailed Description

Generic QSAR molecular surface descriptors class \

Definition at line 18 of file surfaceBase.h.

Constructor & Destructor Documentation

BALL::SurfaceBase::SurfaceBase ( )

Default constructor

BALL::SurfaceBase::SurfaceBase ( const SurfaceBase sb)

Copy constructor

BALL::SurfaceBase::SurfaceBase ( const String name)

Named constructor

BALL::SurfaceBase::SurfaceBase ( const String name,
const String unit 
)

Named unity constructor

virtual BALL::SurfaceBase::~SurfaceBase ( )
virtual

Destructor

Member Function Documentation

void BALL::SurfaceBase::calculate_ ( AtomContainer ac)
protectedvirtual

Reimplemented from BALL::Descriptor.

void BALL::SurfaceBase::computeAllDescriptors ( AtomContainer ac)
bool BALL::SurfaceBase::isValid_ ( AtomContainer ac)
protectedvirtual

Reimplemented from BALL::Descriptor.

SurfaceBase& BALL::SurfaceBase::operator= ( const SurfaceBase sb)

Assignment operator