BALL  1.4.2
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BALL::AssignBondOrderProcessor Member List

This is the complete list of members for BALL::AssignBondOrderProcessor, including all inherited members.

ac_BALL::AssignBondOrderProcessorprotected
add_missing_hydrogens_BALL::AssignBondOrderProcessorprotected
alpha_BALL::AssignBondOrderProcessorprotected
apply(Position i)BALL::AssignBondOrderProcessor
apply_(BondOrderAssignment &solution)BALL::AssignBondOrderProcessorprotected
argument_pointer typedefBALL::UnaryFunctor< AtomContainer, Processor::Result >
argument_reference typedefBALL::UnaryFunctor< AtomContainer, Processor::Result >
argument_type typedefBALL::UnaryFunctor< AtomContainer, Processor::Result >
AssignBondOrderProcessor()BALL::AssignBondOrderProcessor
AssignBondOrderProcessor(const AssignBondOrderProcessor &abop)BALL::AssignBondOrderProcessorprotected
AStarBondOrderStrategy classBALL::AssignBondOrderProcessorfriend
atom_to_block_BALL::AssignBondOrderProcessorprotected
atom_to_virtual_bond_index_BALL::AssignBondOrderProcessorprotected
atom_type_normalization_factor_BALL::AssignBondOrderProcessorprotected
block_definition_BALL::AssignBondOrderProcessorprotected
block_to_length_BALL::AssignBondOrderProcessorprotected
block_to_start_idx_BALL::AssignBondOrderProcessorprotected
block_to_start_valence_BALL::AssignBondOrderProcessorprotected
bond_fixed_BALL::AssignBondOrderProcessorprotected
bond_length_normalization_factor_BALL::AssignBondOrderProcessorprotected
bond_lengths_penalties_BALL::AssignBondOrderProcessorprotected
bond_to_index_BALL::AssignBondOrderProcessorprotected
BondOrderAssignment classBALL::AssignBondOrderProcessorfriend
BondOrderAssignmentStrategy classBALL::AssignBondOrderProcessorfriend
BranchAndBoundBondOrderStrategy classBALL::AssignBondOrderProcessorfriend
clear()BALL::AssignBondOrderProcessor
compute_also_connectivity_BALL::AssignBondOrderProcessorprotected
compute_also_non_optimal_solutions_BALL::AssignBondOrderProcessorprotected
computeNextSolution(bool apply_solution=true)BALL::AssignBondOrderProcessor
computeVirtualHydrogens_(Atom *atom)BALL::AssignBondOrderProcessorprotected
const_argument_pointer typedefBALL::UnaryFunctor< AtomContainer, Processor::Result >
const_argument_reference typedefBALL::UnaryFunctor< AtomContainer, Processor::Result >
evaluatePenalty(AtomContainer *ac)BALL::AssignBondOrderProcessor
evaluation_mode_BALL::AssignBondOrderProcessorprotected
finish()BALL::AssignBondOrderProcessorvirtual
fixed_val_BALL::AssignBondOrderProcessorprotected
FPTBondOrderStrategy classBALL::AssignBondOrderProcessorfriend
free_bonds_BALL::AssignBondOrderProcessorprotected
getAtomContainer()BALL::AssignBondOrderProcessorinline
getAtomContainer() const BALL::AssignBondOrderProcessorinline
getNumberOfAddedHydrogens(Position i)BALL::AssignBondOrderProcessorinline
getNumberOfComputedSolutions()BALL::AssignBondOrderProcessorinline
getNumberOfNodeExpansions(Position i)BALL::AssignBondOrderProcessorinline
getNumberOfNodeExpansions_(const BondOrderAssignment &sol)BALL::AssignBondOrderProcessorinlineprotected
getPenaltyClass_(Atom *atom)BALL::AssignBondOrderProcessorprotected
getQueueSize(Position i)BALL::AssignBondOrderProcessorinline
getQueueSize_(const BondOrderAssignment &sol)BALL::AssignBondOrderProcessorinlineprotected
getSolution(Position i)BALL::AssignBondOrderProcessor
getTotalCharge(Position i)BALL::AssignBondOrderProcessorinline
getTotalCharge_(const BondOrderAssignment &sol)BALL::AssignBondOrderProcessorinlineprotected
getTotalPenalty(Position i=0)BALL::AssignBondOrderProcessorinline
getTotalPenalty_(const BondOrderAssignment &sol)BALL::AssignBondOrderProcessorinlineprotected
hasValidOptions()BALL::AssignBondOrderProcessorinline
ILPBondOrderStrategy classBALL::AssignBondOrderProcessorfriend
index_to_bond_BALL::AssignBondOrderProcessorprotected
KGreedyBondOrderStrategy classBALL::AssignBondOrderProcessorfriend
last_applied_solution_BALL::AssignBondOrderProcessorprotected
max_bond_order_BALL::AssignBondOrderProcessorprotected
max_number_of_solutions_BALL::AssignBondOrderProcessorprotected
max_penalty_BALL::AssignBondOrderProcessorprotected
num_of_free_bonds_BALL::AssignBondOrderProcessorprotected
num_of_virtual_bonds_BALL::AssignBondOrderProcessorprotected
number_of_virtual_hydrogens_BALL::AssignBondOrderProcessorprotected
operator()(AtomContainer &ac)BALL::AssignBondOrderProcessorvirtual
operator=(const AssignBondOrderProcessor &abop)BALL::AssignBondOrderProcessorprotected
optionsBALL::AssignBondOrderProcessor
PartialBondOrderAssignment classBALL::AssignBondOrderProcessorfriend
penalties_BALL::AssignBondOrderProcessorprotected
PQ_Entry_ classBALL::AssignBondOrderProcessorfriend
preassignPenaltyClasses_()BALL::AssignBondOrderProcessorprotected
precomputeBondLengthPenalties_()BALL::AssignBondOrderProcessorprotected
readAtomPenalties_()BALL::AssignBondOrderProcessorprotected
readOptions_()BALL::AssignBondOrderProcessorprotected
resetBondOrders()BALL::AssignBondOrderProcessor
result_type typedefBALL::UnaryFunctor< AtomContainer, Processor::Result >
setDefaultOptions()BALL::AssignBondOrderProcessor
solutions_BALL::AssignBondOrderProcessorprotected
start()BALL::AssignBondOrderProcessorvirtual
starting_configuration_BALL::AssignBondOrderProcessorprotected
storeOriginalConfiguration_()BALL::AssignBondOrderProcessorprotected
strategies_BALL::AssignBondOrderProcessorprotected
timer_BALL::AssignBondOrderProcessorprotected
total_num_of_bonds_BALL::AssignBondOrderProcessorprotected
UnaryProcessor()BALL::UnaryProcessor< AtomContainer >inline
UnaryProcessor(const UnaryProcessor &)BALL::UnaryProcessor< AtomContainer >inline
use_fine_penalty_BALL::AssignBondOrderProcessorprotected
valid_BALL::AssignBondOrderProcessorprotected
virtual_bond_BALL::AssignBondOrderProcessorprotected
virtual_bond_index_to_atom_BALL::AssignBondOrderProcessorprotected
virtual_bond_index_to_number_of_virtual_hydrogens_BALL::AssignBondOrderProcessorprotected
~AssignBondOrderProcessor()BALL::AssignBondOrderProcessorvirtual
~UnaryProcessor()BALL::UnaryProcessor< AtomContainer >inlinevirtual
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